RNA–Protein interactions for RNA: ENST00000576788.1

TRAP1-217, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-217ENST00000576788 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
TRAP1-217ENST00000576788 SIK1P57059 783 aa13.17□□□□□ -0.3
TRAP1-217ENST00000576788 MSL1Q68DK7 614 aa13.17□□□□□ -0.3
TRAP1-217ENST00000576788 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
TRAP1-217ENST00000576788 FLAD1Q8NFF5 587 aa13.16□□□□□ -0.3
TRAP1-217ENST00000576788 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
TRAP1-217ENST00000576788 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
TRAP1-217ENST00000576788 UBR3Q6ZT12 1888 aa13.15□□□□□ -0.3
TRAP1-217ENST00000576788 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
TRAP1-217ENST00000576788 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
TRAP1-217ENST00000576788 GNPATO15228 680 aa13.14□□□□□ -0.31
TRAP1-217ENST00000576788 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
TRAP1-217ENST00000576788 LINC00116Q8NCU8 138 aa13.14□□□□□ -0.31
TRAP1-217ENST00000576788 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
TRAP1-217ENST00000576788 AKAP4Q5JQC9 854 aa13.13□□□□□ -0.31
TRAP1-217ENST00000576788 SGIP1Q9BQI5 828 aa13.13□□□□□ -0.31
TRAP1-217ENST00000576788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.12□□□□□ -0.31
TRAP1-217ENST00000576788 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
TRAP1-217ENST00000576788 YY1P25490 414 aa13.12□□□□□ -0.31
TRAP1-217ENST00000576788 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
TRAP1-217ENST00000576788 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
TRAP1-217ENST00000576788 COL24A1Q17RW2 1714 aa13.11□□□□□ -0.31
TRAP1-217ENST00000576788 ITPK1Q13572 414 aa13.11□□□□□ -0.31
TRAP1-217ENST00000576788 GPR162Q16538 588 aa13.11□□□□□ -0.31
TRAP1-217ENST00000576788 SMIM5Q71RC9 77 aa13.11□□□□□ -0.31
TRAP1-217ENST00000576788 NUDCQ9Y266 331 aa13.11□□□□□ -0.31
TRAP1-217ENST00000576788 SSFA2P28290 1259 aa13.1□□□□□ -0.31
TRAP1-217ENST00000576788 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
TRAP1-217ENST00000576788 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
TRAP1-217ENST00000576788 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
TRAP1-217ENST00000576788 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
TRAP1-217ENST00000576788 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
TRAP1-217ENST00000576788 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
TRAP1-217ENST00000576788 CHD4Q14839 1912 aa13.09□□□□□ -0.31
TRAP1-217ENST00000576788 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
TRAP1-217ENST00000576788 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.31
TRAP1-217ENST00000576788 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
TRAP1-217ENST00000576788 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
TRAP1-217ENST00000576788 SLC52A2Q9HAB3 445 aa13.08□□□□□ -0.32
TRAP1-217ENST00000576788 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
TRAP1-217ENST00000576788 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
TRAP1-217ENST00000576788 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAP1-217ENST00000576788 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
TRAP1-217ENST00000576788 MRC1P22897 1456 aa13.07□□□□□ -0.32
TRAP1-217ENST00000576788 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
TRAP1-217ENST00000576788 RFC4P35249 363 aa13.06□□□□□ -0.32
TRAP1-217ENST00000576788 TEFQ10587 303 aa13.06□□□□□ -0.32
TRAP1-217ENST00000576788 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
TRAP1-217ENST00000576788 NLGN2Q8NFZ4 835 aa13.06□□□□□ -0.32
TRAP1-217ENST00000576788 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
TRAP1-217ENST00000576788 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
TRAP1-217ENST00000576788 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
TRAP1-217ENST00000576788 NEFMP07197 916 aa13.05□□□□□ -0.32
TRAP1-217ENST00000576788 SLC39A6Q13433 755 aa13.05□□□□□ -0.32
TRAP1-217ENST00000576788 RALBP1Q15311 655 aa13.05□□□□□ -0.32
TRAP1-217ENST00000576788 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
TRAP1-217ENST00000576788 TJP1Q07157 1748 aa13.05□□□□□ -0.32
TRAP1-217ENST00000576788 CRKLP46109 303 aaKnown RBP13.04□□□□□ -0.32
TRAP1-217ENST00000576788 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
TRAP1-217ENST00000576788 RSPH6AQ9H0K4 717 aa13.04□□□□□ -0.32
TRAP1-217ENST00000576788 C4AP0C0L4 1744 aa13.03□□□□□ -0.32
TRAP1-217ENST00000576788 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
TRAP1-217ENST00000576788 ADRA2BP18089 450 aa13.03□□□□□ -0.32
TRAP1-217ENST00000576788 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
TRAP1-217ENST00000576788 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.32
TRAP1-217ENST00000576788 MMP10P09238 476 aa13.02□□□□□ -0.33
TRAP1-217ENST00000576788 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
TRAP1-217ENST00000576788 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
TRAP1-217ENST00000576788 WWC3Q9ULE0 1092 aa13.02□□□□□ -0.33
TRAP1-217ENST00000576788 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
TRAP1-217ENST00000576788 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
TRAP1-217ENST00000576788 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
TRAP1-217ENST00000576788 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
TRAP1-217ENST00000576788 MYBBP1AQ9BQG0 1328 aaKnown RBP13.01□□□□□ -0.33
TRAP1-217ENST00000576788 UBR2Q8IWV8 1755 aa13□□□□□ -0.33
TRAP1-217ENST00000576788 ZPR1O75312 459 aa13□□□□□ -0.33
TRAP1-217ENST00000576788 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
TRAP1-217ENST00000576788 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
TRAP1-217ENST00000576788 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
TRAP1-217ENST00000576788 KCPQ6ZWJ8 1503 aa12.99□□□□□ -0.33
TRAP1-217ENST00000576788 FCHSD2O94868 740 aa12.99□□□□□ -0.33
TRAP1-217ENST00000576788 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
TRAP1-217ENST00000576788 DLG5Q8TDM6 1919 aa12.99□□□□□ -0.33
TRAP1-217ENST00000576788 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
TRAP1-217ENST00000576788 GRIN3BO60391 1043 aa12.98□□□□□ -0.33
TRAP1-217ENST00000576788 STARD3NLO95772 234 aa12.98□□□□□ -0.33
TRAP1-217ENST00000576788 GYS1P13807 737 aa12.98□□□□□ -0.33
TRAP1-217ENST00000576788 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
TRAP1-217ENST00000576788 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
TRAP1-217ENST00000576788 SRP68Q9UHB9 627 aaKnown RBP12.98□□□□□ -0.33
TRAP1-217ENST00000576788 UTRNP46939 3433 aa12.98□□□□□ -0.33
TRAP1-217ENST00000576788 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
TRAP1-217ENST00000576788 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
TRAP1-217ENST00000576788 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
TRAP1-217ENST00000576788 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
TRAP1-217ENST00000576788 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRAP1-217ENST00000576788 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
TRAP1-217ENST00000576788 INTS5Q6P9B9 1019 aaKnown RBP12.97□□□□□ -0.33
TRAP1-217ENST00000576788 ZNF790Q6PG37 636 aa12.97□□□□□ -0.33
TRAP1-217ENST00000576788 MCM10Q7L590 875 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms