RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PZPP20742 1482 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 SMTNL1A8MU46 457 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 NLRP6P59044 892 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 CAGE1Q8TC20 777 aa15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 TFIP11Q9UBB9 837 aaKnown RBP15.45■□□□□ 0.06
PCDHGB3-201ENST00000576222 TSHZ3Q63HK5 1081 aa15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 CEP135Q66GS9 1140 aa15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 CNPY2Q9Y2B0 182 aa15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 COL17A1Q9UMD9 1497 aaPredicted RBP15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 CCDC186Q7Z3E2 898 aa15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 C16orf71Q8IYS4 520 aaPredicted RBP15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 SMARCE1Q969G3 411 aa15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 URI1O94763 535 aaPredicted RBP15.44■□□□□ 0.06
PCDHGB3-201ENST00000576222 AXDND1Q5T1B0 1012 aaPredicted RBP15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 POLR3GO15318 223 aaPredicted RBP15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 ANKRD44Q8N8A2 993 aa15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 CCDC47Q96A33 483 aaKnown RBP15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 SIL1Q9H173 461 aa15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 KDM4AO75164 1064 aa15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 ANAPC15P60006 121 aa15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 BMS1Q14692 1282 aaKnown RBP15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 PTPRCP08575 1304 aa15.43■□□□□ 0.06
PCDHGB3-201ENST00000576222 IGSF3O75054 1194 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 GTF2F1P35269 517 aaKnown RBP eCLIP15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 BRPF1P55201 1214 aaPredicted RBP15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 CFAP100Q494V2 611 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 FAM200AQ8TCP9 573 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 TIGD1Q96MW7 591 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 USP26Q9BXU7 913 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 ATP2B1P20020 1258 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 GAS2L3Q86XJ1 694 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 PPP1R9BQ96SB3 815 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 CTAGE5O15320 804 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 PDE1AP54750 535 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 PPFIBP1Q86W92 1011 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 NOL10Q9BSC4 688 aaKnown RBP15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
PCDHGB3-201ENST00000576222 FAM177BA6PVY3 158 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 PLEKHM2Q8IWE5 1019 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 SPG7Q9UQ90 795 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 EMILIN1Q9Y6C2 1016 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 NUTM2GQ5VZR2 741 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 ESYT1Q9BSJ8 1104 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 KIF14Q15058 1648 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 ERICH2A1L162 156 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 CAVIN2O95810 425 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 GSDMDP57764 484 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 BBXQ8WY36 941 aaPredicted RBP15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 DCTPP1Q9H773 170 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 LRRFIP2Q9Y608 721 aaKnown RBP15.41■□□□□ 0.06
PCDHGB3-201ENST00000576222 ANTXR1Q9H6X2 564 aa15.4■□□□□ 0.06
PCDHGB3-201ENST00000576222 TXNDC2Q86VQ3 553 aa15.4■□□□□ 0.06
PCDHGB3-201ENST00000576222 MYRIPQ8NFW9 859 aa15.4■□□□□ 0.06
PCDHGB3-201ENST00000576222 ZSCAN12O43309 604 aa15.4■□□□□ 0.06
PCDHGB3-201ENST00000576222 CCDC102AQ96A19 550 aa15.4■□□□□ 0.06
PCDHGB3-201ENST00000576222 MEIS3Q99687 375 aa15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 LMBRD1Q9NUN5 540 aa15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 RDXP35241 583 aaKnown RBP15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 CCDC171Q6TFL3 1326 aa15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 NAP1L1P55209 391 aaKnown RBP15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 SNW1Q13573 536 aaKnown RBP15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 FEZ1Q99689 392 aa15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 INTS4Q96HW7 963 aaKnown RBP15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 DACH1Q9UI36 760 aa15.39■□□□□ 0.05
PCDHGB3-201ENST00000576222 DEF6Q9H4E7 631 aa15.38■□□□□ 0.05
PCDHGB3-201ENST00000576222 MARCH6O60337 910 aa15.38■□□□□ 0.05
PCDHGB3-201ENST00000576222 KIF20AO95235 890 aa15.38■□□□□ 0.05
PCDHGB3-201ENST00000576222 ZNF500O60304 480 aaPredicted RBP15.38■□□□□ 0.05
PCDHGB3-201ENST00000576222 STX1AQ16623 288 aa15.38■□□□□ 0.05
PCDHGB3-201ENST00000576222 MRC2Q9UBG0 1479 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 NPC1L1Q9UHC9 1359 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 FAM83GA6ND36 823 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 F13A1P00488 732 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 ANO6Q4KMQ2 910 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 PIBF1Q8WXW3 757 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 C14orf93Q9H972 538 aaKnown RBP15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 FAM135AQ9P2D6 1515 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 CDR1P51861 262 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 VAMP4O75379 141 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 CLSTN1O94985 981 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 SKILP12757 684 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 ZMYM3Q14202 1370 aa15.37■□□□□ 0.05
PCDHGB3-201ENST00000576222 PATL2C9JE40 543 aaKnown RBP15.36■□□□□ 0.05
PCDHGB3-201ENST00000576222 DNM1Q05193 864 aaKnown RBP15.36■□□□□ 0.05
PCDHGB3-201ENST00000576222 OGFRQ9NZT2 677 aa15.36■□□□□ 0.05
PCDHGB3-201ENST00000576222 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
PCDHGB3-201ENST00000576222 ZBTB7BO15156 539 aaPredicted RBP15.36■□□□□ 0.05
PCDHGB3-201ENST00000576222 PTGS1P23219 599 aa15.36■□□□□ 0.05
PCDHGB3-201ENST00000576222 PDE4CQ08493 712 aa15.36■□□□□ 0.05
PCDHGB3-201ENST00000576222 XBP1P17861 261 aa15.36■□□□□ 0.05
PCDHGB3-201ENST00000576222 TMC6Q7Z403 805 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 NME9Q86XW9 330 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 C8orf58Q8NAV2 365 aa15.35■□□□□ 0.05
PCDHGB3-201ENST00000576222 DACT1Q9NYF0 836 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms