RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 DALRD3Q5D0E6 543 aaKnown RBP8.33□□□□□ -1.08
SMG6-219ENST00000575663 PIGBQ92521 554 aa8.33□□□□□ -1.08
SMG6-219ENST00000575663 L3MBTL2Q969R5 705 aa8.33□□□□□ -1.08
SMG6-219ENST00000575663 TMOD3Q9NYL9 352 aa8.33□□□□□ -1.08
SMG6-219ENST00000575663 PIM2Q9P1W9 311 aa8.33□□□□□ -1.08
SMG6-219ENST00000575663 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
SMG6-219ENST00000575663 PKD1L3Q7Z443 1732 aa8.32□□□□□ -1.08
SMG6-219ENST00000575663 KIAA1551Q9HCM1 1747 aa8.32□□□□□ -1.08
SMG6-219ENST00000575663 KIF13BQ9NQT8 1826 aa8.32□□□□□ -1.08
SMG6-219ENST00000575663 CYP27B1O15528 508 aa8.32□□□□□ -1.08
SMG6-219ENST00000575663 ADRA2BP18089 450 aa8.32□□□□□ -1.08
SMG6-219ENST00000575663 RRS1Q15050 365 aaKnown RBP8.32□□□□□ -1.08
SMG6-219ENST00000575663 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
SMG6-219ENST00000575663 DCAF5Q96JK2 942 aa8.32□□□□□ -1.08
SMG6-219ENST00000575663 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
SMG6-219ENST00000575663 RFC4P35249 363 aa8.31□□□□□ -1.08
SMG6-219ENST00000575663 ITPK1Q13572 414 aa8.31□□□□□ -1.08
SMG6-219ENST00000575663 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
SMG6-219ENST00000575663 SPG7Q9UQ90 795 aa8.31□□□□□ -1.08
SMG6-219ENST00000575663 INSRP06213 1382 aa8.31□□□□□ -1.08
SMG6-219ENST00000575663 FLT4P35916 1363 aa8.31□□□□□ -1.08
SMG6-219ENST00000575663 KIF24Q5T7B8 1368 aa8.31□□□□□ -1.08
SMG6-219ENST00000575663 C4AP0C0L4 1744 aa8.31□□□□□ -1.08
SMG6-219ENST00000575663 GYS1P13807 737 aa8.3□□□□□ -1.08
SMG6-219ENST00000575663 VEGFAP15692 232 aaPredicted RBP8.3□□□□□ -1.08
SMG6-219ENST00000575663 CARD11Q9BXL7 1154 aa8.3□□□□□ -1.08
SMG6-219ENST00000575663 N4BP2Q86UW6 1770 aaPredicted RBP8.3□□□□□ -1.08
SMG6-219ENST00000575663 GLTPD2A6NH11 291 aa8.29□□□□□ -1.08
SMG6-219ENST00000575663 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
SMG6-219ENST00000575663 FBLN1P23142 703 aa8.29□□□□□ -1.08
SMG6-219ENST00000575663 NKX1-1Q15270 411 aaPredicted RBP8.29□□□□□ -1.08
SMG6-219ENST00000575663 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
SMG6-219ENST00000575663 PRDM10Q9NQV6 1147 aa8.29□□□□□ -1.08
SMG6-219ENST00000575663 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
SMG6-219ENST00000575663 KDRP35968 1356 aa8.28□□□□□ -1.08
SMG6-219ENST00000575663 LMNB1P20700 586 aa8.28□□□□□ -1.08
SMG6-219ENST00000575663 KCNA3P22001 575 aa8.28□□□□□ -1.08
SMG6-219ENST00000575663 RASSF7Q02833 373 aa8.28□□□□□ -1.08
SMG6-219ENST00000575663 ARHGEF1Q92888 912 aaKnown RBP8.28□□□□□ -1.08
SMG6-219ENST00000575663 CREBZFQ9NS37 354 aa8.28□□□□□ -1.08
SMG6-219ENST00000575663 ASAP1Q9ULH1 1129 aa8.28□□□□□ -1.08
SMG6-219ENST00000575663 RGPD2P0DJD1 1756 aa8.27□□□□□ -1.08
SMG6-219ENST00000575663 MAP2P11137 1827 aaKnown RBP8.27□□□□□ -1.09
SMG6-219ENST00000575663 ARFGEF1Q9Y6D6 1849 aa8.27□□□□□ -1.09
SMG6-219ENST00000575663 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
SMG6-219ENST00000575663 HSP90AB2PQ58FF8 381 aa8.27□□□□□ -1.09
SMG6-219ENST00000575663 RC3H1Q5TC82 1133 aaKnown RBP8.27□□□□□ -1.09
SMG6-219ENST00000575663 RBM42Q9BTD8 480 aaKnown RBP8.27□□□□□ -1.09
SMG6-219ENST00000575663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMG6-219ENST00000575663 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
SMG6-219ENST00000575663 KDM6AO15550 1401 aaPredicted RBP8.27□□□□□ -1.09
SMG6-219ENST00000575663 BRCA1P38398 1863 aaKnown RBP8.26□□□□□ -1.09
SMG6-219ENST00000575663 FOXN1O15353 648 aa8.26□□□□□ -1.09
SMG6-219ENST00000575663 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
SMG6-219ENST00000575663 CTCFP49711 727 aaPredicted RBP8.26□□□□□ -1.09
SMG6-219ENST00000575663 DPY19L2Q6NUT2 758 aa8.26□□□□□ -1.09
SMG6-219ENST00000575663 IFNL2Q8IZJ0 200 aa8.26□□□□□ -1.09
SMG6-219ENST00000575663 GGNBP2Q9H3C7 697 aa8.26□□□□□ -1.09
SMG6-219ENST00000575663 ATG3Q9NT62 314 aa8.26□□□□□ -1.09
SMG6-219ENST00000575663 NCAPD2Q15021 1401 aa8.26□□□□□ -1.09
SMG6-219ENST00000575663 ITGB4P16144 1822 aa8.26□□□□□ -1.09
SMG6-219ENST00000575663 USP42Q9H9J4 1324 aaKnown RBP8.26□□□□□ -1.09
SMG6-219ENST00000575663 CNTNAP1P78357 1384 aa8.25□□□□□ -1.09
SMG6-219ENST00000575663 PHKG2P15735 406 aa8.25□□□□□ -1.09
SMG6-219ENST00000575663 CHRNA5P30532 468 aa8.25□□□□□ -1.09
SMG6-219ENST00000575663 FYB1O15117 783 aa8.24□□□□□ -1.09
SMG6-219ENST00000575663 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
SMG6-219ENST00000575663 CHADLQ6NUI6 762 aa8.24□□□□□ -1.09
SMG6-219ENST00000575663 TONSLQ96HA7 1378 aa8.23□□□□□ -1.09
SMG6-219ENST00000575663 ERVV-2B6SEH9 535 aa8.23□□□□□ -1.09
SMG6-219ENST00000575663 POLRMTO00411 1230 aaKnown RBP8.23□□□□□ -1.09
SMG6-219ENST00000575663 MLLT1Q03111 559 aaPredicted RBP8.23□□□□□ -1.09
SMG6-219ENST00000575663 DDR1Q08345 913 aa8.23□□□□□ -1.09
SMG6-219ENST00000575663 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
SMG6-219ENST00000575663 FKBP8Q14318 412 aa8.23□□□□□ -1.09
SMG6-219ENST00000575663 ABHD8Q96I13 439 aa8.23□□□□□ -1.09
SMG6-219ENST00000575663 ZNF831Q5JPB2 1677 aa8.23□□□□□ -1.09
SMG6-219ENST00000575663 PPM1GO15355 546 aaPredicted RBP8.22□□□□□ -1.09
SMG6-219ENST00000575663 ZPR1O75312 459 aa8.22□□□□□ -1.09
SMG6-219ENST00000575663 TTLL6Q8N841 843 aa8.22□□□□□ -1.09
SMG6-219ENST00000575663 SLC4A9Q96Q91 983 aa8.22□□□□□ -1.09
SMG6-219ENST00000575663 SIN3AQ96ST3 1273 aa8.22□□□□□ -1.09
SMG6-219ENST00000575663 SRP68Q9UHB9 627 aaKnown RBP8.22□□□□□ -1.09
SMG6-219ENST00000575663 EMILIN1Q9Y6C2 1016 aa8.22□□□□□ -1.09
SMG6-219ENST00000575663 TIAM2Q8IVF5 1701 aa8.22□□□□□ -1.09
SMG6-219ENST00000575663 COL5A3P25940 1745 aaPredicted RBP8.21□□□□□ -1.09
SMG6-219ENST00000575663 IQCA1LA6NCM1 817 aa8.21□□□□□ -1.1
SMG6-219ENST00000575663 CRKLP46109 303 aaKnown RBP8.21□□□□□ -1.1
SMG6-219ENST00000575663 LBX1P52954 281 aa8.21□□□□□ -1.1
SMG6-219ENST00000575663 TMEM88BA6NKF7 163 aa8.2□□□□□ -1.1
SMG6-219ENST00000575663 POTECB2RU33 542 aa8.2□□□□□ -1.1
SMG6-219ENST00000575663 NFKBIEO00221 500 aa8.2□□□□□ -1.1
SMG6-219ENST00000575663 CABP4P57796 275 aa8.2□□□□□ -1.1
SMG6-219ENST00000575663 MAP2K1Q02750 393 aaPredicted RBP8.2□□□□□ -1.1
SMG6-219ENST00000575663 ERFEQ4G0M1 354 aa8.2□□□□□ -1.1
SMG6-219ENST00000575663 TESK2Q96S53 571 aa8.2□□□□□ -1.1
SMG6-219ENST00000575663 EYA1Q99502 592 aa8.2□□□□□ -1.1
SMG6-219ENST00000575663 WASHC2AQ641Q2 1341 aa8.2□□□□□ -1.1
SMG6-219ENST00000575663 H0YIN7 160 aa8.19□□□□□ -1.1
SMG6-219ENST00000575663 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms