RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 AK7Q96M32 723 aa22.28■■□□□ 1.16
TMEM88-202ENST00000574668 EYA1Q99502 592 aa22.28■■□□□ 1.16
TMEM88-202ENST00000574668 FLAD1Q8NFF5 587 aa22.27■■□□□ 1.16
TMEM88-202ENST00000574668 NUDCQ9Y266 331 aa22.27■■□□□ 1.16
TMEM88-202ENST00000574668 NKX1-1Q15270 411 aaPredicted RBP22.26■■□□□ 1.15
TMEM88-202ENST00000574668 SPG7Q9UQ90 795 aa22.26■■□□□ 1.15
TMEM88-202ENST00000574668 CD2APQ9Y5K6 639 aa22.26■■□□□ 1.15
TMEM88-202ENST00000574668 U2SURPO15042 1029 aaKnown RBP22.25■■□□□ 1.15
TMEM88-202ENST00000574668 LINC00116Q8NCU8 138 aa22.25■■□□□ 1.15
TMEM88-202ENST00000574668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.24■■□□□ 1.15
TMEM88-202ENST00000574668 WWC3Q9ULE0 1092 aa22.24■■□□□ 1.15
TMEM88-202ENST00000574668 DIEXFQ68CQ4 756 aaKnown RBP22.23■■□□□ 1.15
TMEM88-202ENST00000574668 ASAP1Q9ULH1 1129 aa22.23■■□□□ 1.15
TMEM88-202ENST00000574668 IGSF1Q8N6C5 1336 aa22.23■■□□□ 1.15
TMEM88-202ENST00000574668 LOC102724428A0A0B4J2F2 783 aa22.22■■□□□ 1.15
TMEM88-202ENST00000574668 SIK1P57059 783 aa22.22■■□□□ 1.15
TMEM88-202ENST00000574668 UBR3Q6ZT12 1888 aa22.22■■□□□ 1.15
TMEM88-202ENST00000574668 COL3A1P02461 1466 aaPredicted RBP22.22■■□□□ 1.15
TMEM88-202ENST00000574668 HMGB2P26583 209 aaKnown RBP22.21■■□□□ 1.15
TMEM88-202ENST00000574668 ITPK1Q13572 414 aa22.21■■□□□ 1.15
TMEM88-202ENST00000574668 TMOD3Q9NYL9 352 aa22.21■■□□□ 1.15
TMEM88-202ENST00000574668 PHKG2P15735 406 aa22.2■■□□□ 1.14
TMEM88-202ENST00000574668 SULT6B1Q6IMI4 303 aa22.2■■□□□ 1.14
TMEM88-202ENST00000574668 ATP10DQ9P241 1426 aa22.2■■□□□ 1.14
TMEM88-202ENST00000574668 HMOX1P09601 288 aa22.18■■□□□ 1.14
TMEM88-202ENST00000574668 U2AF1L5P0DN76 240 aaPredicted RBP22.18■■□□□ 1.14
TMEM88-202ENST00000574668 SSFA2P28290 1259 aa22.18■■□□□ 1.14
TMEM88-202ENST00000574668 ATP6V1AP38606 617 aa22.18■■□□□ 1.14
TMEM88-202ENST00000574668 U2AF1Q01081 240 aaKnown RBP eCLIP22.18■■□□□ 1.14
TMEM88-202ENST00000574668 IFNL2Q8IZJ0 200 aa22.18■■□□□ 1.14
TMEM88-202ENST00000574668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.18■■□□□ 1.14
TMEM88-202ENST00000574668 GNPATO15228 680 aa22.17■■□□□ 1.14
TMEM88-202ENST00000574668 AEBP1Q8IUX7 1158 aa22.17■■□□□ 1.14
TMEM88-202ENST00000574668 ATG3Q9NT62 314 aa22.17■■□□□ 1.14
TMEM88-202ENST00000574668 ZNF526Q8TF50 670 aaPredicted RBP22.14■■□□□ 1.13
TMEM88-202ENST00000574668 WDR43Q15061 677 aaKnown RBP eCLIP22.13■■□□□ 1.13
TMEM88-202ENST00000574668 ADCY9O60503 1353 aa22.12■■□□□ 1.13
TMEM88-202ENST00000574668 PLEKHO1Q53GL0 409 aaPredicted RBP22.12■■□□□ 1.13
TMEM88-202ENST00000574668 SLC4A9Q96Q91 983 aa22.12■■□□□ 1.13
TMEM88-202ENST00000574668 GPBP1L1Q9HC44 474 aaPredicted RBP22.12■■□□□ 1.13
TMEM88-202ENST00000574668 MRS2Q9HD23 443 aa22.12■■□□□ 1.13
TMEM88-202ENST00000574668 KDRP35968 1356 aa22.12■■□□□ 1.13
TMEM88-202ENST00000574668 MMP10P09238 476 aa22.1■■□□□ 1.13
TMEM88-202ENST00000574668 AMOTQ4VCS5 1084 aa22.1■■□□□ 1.13
TMEM88-202ENST00000574668 FCHSD2O94868 740 aa22.09■■□□□ 1.13
TMEM88-202ENST00000574668 RBM42Q9BTD8 480 aaKnown RBP22.09■■□□□ 1.13
TMEM88-202ENST00000574668 PNNQ9H307 717 aaKnown RBP22.09■■□□□ 1.13
TMEM88-202ENST00000574668 NEFMP07197 916 aa22.08■■□□□ 1.13
TMEM88-202ENST00000574668 PRKAR2BP31323 418 aa22.08■■□□□ 1.13
TMEM88-202ENST00000574668 CCDC184Q52MB2 194 aa22.08■■□□□ 1.13
TMEM88-202ENST00000574668 RSPH6AQ9H0K4 717 aa22.07■■□□□ 1.12
TMEM88-202ENST00000574668 PLEKHG2Q9H7P9 1386 aa22.07■■□□□ 1.12
TMEM88-202ENST00000574668 KDM6AO15550 1401 aaPredicted RBP22.06■■□□□ 1.12
TMEM88-202ENST00000574668 ERVV-2B6SEH9 535 aa22.06■■□□□ 1.12
TMEM88-202ENST00000574668 TRAPPC3LQ5T215 181 aa22.06■■□□□ 1.12
TMEM88-202ENST00000574668 DCAF5Q96JK2 942 aa22.06■■□□□ 1.12
TMEM88-202ENST00000574668 RTCBQ9Y3I0 505 aaKnown RBP22.06■■□□□ 1.12
TMEM88-202ENST00000574668 CICQ96RK0 1608 aaPredicted RBP22.06■■□□□ 1.12
TMEM88-202ENST00000574668 PXDNLA1KZ92 1463 aa22.05■■□□□ 1.12
TMEM88-202ENST00000574668 ZNF530Q6P9A1 599 aaPredicted RBP22.05■■□□□ 1.12
TMEM88-202ENST00000574668 CEP350Q5VT06 3117 aa22.05■■□□□ 1.12
TMEM88-202ENST00000574668 ARHGEF1Q92888 912 aaKnown RBP22.04■■□□□ 1.12
TMEM88-202ENST00000574668 C1orf141Q5JVX7 400 aa22.03■■□□□ 1.12
TMEM88-202ENST00000574668 A0A0G2JLW4 131 aa22.02■■□□□ 1.12
TMEM88-202ENST00000574668 HSP90AB1P08238 724 aaKnown RBP22.02■■□□□ 1.12
TMEM88-202ENST00000574668 CABP4P57796 275 aa22.02■■□□□ 1.12
TMEM88-202ENST00000574668 KIAA1551Q9HCM1 1747 aa22.02■■□□□ 1.12
TMEM88-202ENST00000574668 MAPK8IP3Q9UPT6 1336 aa22.02■■□□□ 1.12
TMEM88-202ENST00000574668 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
TMEM88-202ENST00000574668 CCER2I3L3R5 266 aa22.01■■□□□ 1.11
TMEM88-202ENST00000574668 GYS1P13807 737 aa22.01■■□□□ 1.11
TMEM88-202ENST00000574668 MIER1Q8N108 512 aa22.01■■□□□ 1.11
TMEM88-202ENST00000574668 NLGN1Q8N2Q7 840 aa22.01■■□□□ 1.11
TMEM88-202ENST00000574668 GAS2L2Q8NHY3 880 aa22.01■■□□□ 1.11
TMEM88-202ENST00000574668 ADAMTS8Q9UP79 889 aa22.01■■□□□ 1.11
TMEM88-202ENST00000574668 CNTNAP4Q9C0A0 1308 aa22.01■■□□□ 1.11
TMEM88-202ENST00000574668 N4BP2Q86UW6 1770 aaPredicted RBP22■■□□□ 1.11
TMEM88-202ENST00000574668 C10orf71Q711Q0 1435 aa22■■□□□ 1.11
TMEM88-202ENST00000574668 PTCD1O75127 700 aaKnown RBP22■■□□□ 1.11
TMEM88-202ENST00000574668 MTHFSDQ2M296 383 aaKnown RBP22■■□□□ 1.11
TMEM88-202ENST00000574668 RC3H1Q5TC82 1133 aaKnown RBP22■■□□□ 1.11
TMEM88-202ENST00000574668 BCS1LQ9Y276 419 aa22■■□□□ 1.11
TMEM88-202ENST00000574668 ZNF831Q5JPB2 1677 aa22■■□□□ 1.11
TMEM88-202ENST00000574668 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
TMEM88-202ENST00000574668 RPS6KA4O75676 772 aa21.99■■□□□ 1.11
TMEM88-202ENST00000574668 RFC4P35249 363 aa21.99■■□□□ 1.11
TMEM88-202ENST00000574668 PNISRQ8TF01 805 aaKnown RBP21.99■■□□□ 1.11
TMEM88-202ENST00000574668 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
TMEM88-202ENST00000574668 DPEP1P16444 411 aa21.98■■□□□ 1.11
TMEM88-202ENST00000574668 HSPA6P17066 643 aa21.98■■□□□ 1.11
TMEM88-202ENST00000574668 ADRA2BP18089 450 aa21.98■■□□□ 1.11
TMEM88-202ENST00000574668 TGFB2P61812 414 aa21.98■■□□□ 1.11
TMEM88-202ENST00000574668 KIF3CO14782 793 aa21.97■■□□□ 1.11
TMEM88-202ENST00000574668 AKAP4Q5JQC9 854 aa21.97■■□□□ 1.11
TMEM88-202ENST00000574668 CCDC146Q8IYE0 955 aa21.97■■□□□ 1.11
TMEM88-202ENST00000574668 NFATC2IPQ8NCF5 419 aa21.97■■□□□ 1.11
TMEM88-202ENST00000574668 PLEKHF1Q96S99 279 aa21.97■■□□□ 1.11
TMEM88-202ENST00000574668 C4AP0C0L4 1744 aa21.97■■□□□ 1.11
TMEM88-202ENST00000574668 FAM9BQ8IZU0 186 aa21.96■■□□□ 1.11
TMEM88-202ENST00000574668 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms