RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 COL23A1Q86Y22 540 aaPredicted RBP22.21■■□□□ 1.15
TVP23B-206ENST00000574226 FHDC1Q9C0D6 1143 aaPredicted RBP22.21■■□□□ 1.15
TVP23B-206ENST00000574226 ATP6V1AP38606 617 aa22.2■■□□□ 1.14
TVP23B-206ENST00000574226 SYT17Q9BSW7 474 aa22.2■■□□□ 1.14
TVP23B-206ENST00000574226 SCN11AQ9UI33 1791 aa22.2■■□□□ 1.14
TVP23B-206ENST00000574226 HMOX1P09601 288 aa22.19■■□□□ 1.14
TVP23B-206ENST00000574226 SSFA2P28290 1259 aa22.19■■□□□ 1.14
TVP23B-206ENST00000574226 COL3A1P02461 1466 aaPredicted RBP22.19■■□□□ 1.14
TVP23B-206ENST00000574226 UBR3Q6ZT12 1888 aa22.18■■□□□ 1.14
TVP23B-206ENST00000574226 CNGB1Q14028 1251 aaPredicted RBP22.17■■□□□ 1.14
TVP23B-206ENST00000574226 NFATC2IPQ8NCF5 419 aa22.16■■□□□ 1.14
TVP23B-206ENST00000574226 NUDCQ9Y266 331 aa22.16■■□□□ 1.14
TVP23B-206ENST00000574226 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
TVP23B-206ENST00000574226 LINC00116Q8NCU8 138 aa22.15■■□□□ 1.14
TVP23B-206ENST00000574226 RBM42Q9BTD8 480 aaKnown RBP22.15■■□□□ 1.14
TVP23B-206ENST00000574226 ITPK1Q13572 414 aa22.14■■□□□ 1.13
TVP23B-206ENST00000574226 RC3H1Q5TC82 1133 aaKnown RBP22.14■■□□□ 1.13
TVP23B-206ENST00000574226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.13■■□□□ 1.13
TVP23B-206ENST00000574226 SLC52A2Q9HAB3 445 aa22.13■■□□□ 1.13
TVP23B-206ENST00000574226 GNPATO15228 680 aa22.12■■□□□ 1.13
TVP23B-206ENST00000574226 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
TVP23B-206ENST00000574226 MTHFSDQ2M296 383 aaKnown RBP22.12■■□□□ 1.13
TVP23B-206ENST00000574226 GAS2L2Q8NHY3 880 aa22.12■■□□□ 1.13
TVP23B-206ENST00000574226 CNTNAP4Q9C0A0 1308 aa22.11■■□□□ 1.13
TVP23B-206ENST00000574226 VIRMAQ69YN4 1812 aaKnown RBP22.11■■□□□ 1.13
TVP23B-206ENST00000574226 RNMTO43148 476 aaKnown RBP22.11■■□□□ 1.13
TVP23B-206ENST00000574226 ADRA2BP18089 450 aa22.11■■□□□ 1.13
TVP23B-206ENST00000574226 RTCBQ9Y3I0 505 aaKnown RBP22.11■■□□□ 1.13
TVP23B-206ENST00000574226 MRC1P22897 1456 aa22.1■■□□□ 1.13
TVP23B-206ENST00000574226 COL5A3P25940 1745 aaPredicted RBP22.1■■□□□ 1.13
TVP23B-206ENST00000574226 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
TVP23B-206ENST00000574226 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
TVP23B-206ENST00000574226 PHF14O94880 888 aa22.09■■□□□ 1.13
TVP23B-206ENST00000574226 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
TVP23B-206ENST00000574226 PTCD1O75127 700 aaKnown RBP22.08■■□□□ 1.13
TVP23B-206ENST00000574226 TRAPPC3LQ5T215 181 aa22.08■■□□□ 1.13
TVP23B-206ENST00000574226 LGR6Q9HBX8 967 aa22.08■■□□□ 1.13
TVP23B-206ENST00000574226 GNAT3A8MTJ3 354 aa22.07■■□□□ 1.12
TVP23B-206ENST00000574226 MSL1Q68DK7 614 aa22.07■■□□□ 1.12
TVP23B-206ENST00000574226 KLHL34Q8N239 644 aa22.07■■□□□ 1.12
TVP23B-206ENST00000574226 RPS6KA4O75676 772 aa22.06■■□□□ 1.12
TVP23B-206ENST00000574226 FCHSD2O94868 740 aa22.06■■□□□ 1.12
TVP23B-206ENST00000574226 CD2APQ9Y5K6 639 aa22.06■■□□□ 1.12
TVP23B-206ENST00000574226 AMIGO3Q86WK7 504 aa22.05■■□□□ 1.12
TVP23B-206ENST00000574226 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
TVP23B-206ENST00000574226 YY1P25490 414 aa22.04■■□□□ 1.12
TVP23B-206ENST00000574226 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
TVP23B-206ENST00000574226 RSPH6AQ9H0K4 717 aa22.04■■□□□ 1.12
TVP23B-206ENST00000574226 PRKAR2BP31323 418 aa22.03■■□□□ 1.12
TVP23B-206ENST00000574226 TEFQ10587 303 aa22.03■■□□□ 1.12
TVP23B-206ENST00000574226 VSIG10Q8N0Z9 540 aa22.03■■□□□ 1.12
TVP23B-206ENST00000574226 NLGN1Q8N2Q7 840 aa22.03■■□□□ 1.12
TVP23B-206ENST00000574226 MYH14Q7Z406 1995 aaKnown RBP22.02■■□□□ 1.12
TVP23B-206ENST00000574226 RFC4P35249 363 aa22.01■■□□□ 1.11
TVP23B-206ENST00000574226 CRKLP46109 303 aaKnown RBP22.01■■□□□ 1.11
TVP23B-206ENST00000574226 GPR162Q16538 588 aa22.01■■□□□ 1.11
TVP23B-206ENST00000574226 CHD4Q14839 1912 aa22.01■■□□□ 1.11
TVP23B-206ENST00000574226 TJP1Q07157 1748 aa22■■□□□ 1.11
TVP23B-206ENST00000574226 TTC5Q8N0Z6 440 aa22■■□□□ 1.11
TVP23B-206ENST00000574226 ARHGEF1Q92888 912 aaKnown RBP22■■□□□ 1.11
TVP23B-206ENST00000574226 NEFMP07197 916 aa21.99■■□□□ 1.11
TVP23B-206ENST00000574226 RALBP1Q15311 655 aa21.99■■□□□ 1.11
TVP23B-206ENST00000574226 SMIM5Q71RC9 77 aa21.98■■□□□ 1.11
TVP23B-206ENST00000574226 IL17REQ8NFR9 667 aa21.98■■□□□ 1.11
TVP23B-206ENST00000574226 PHACTR3Q96KR7 559 aa21.98■■□□□ 1.11
TVP23B-206ENST00000574226 CEMIPQ8WUJ3 1361 aa21.98■■□□□ 1.11
TVP23B-206ENST00000574226 UBR2Q8IWV8 1755 aa21.97■■□□□ 1.11
TVP23B-206ENST00000574226 GRIN3BO60391 1043 aa21.97■■□□□ 1.11
TVP23B-206ENST00000574226 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
TVP23B-206ENST00000574226 NLGN2Q8NFZ4 835 aa21.97■■□□□ 1.11
TVP23B-206ENST00000574226 RTF1Q92541 710 aaKnown RBP21.97■■□□□ 1.11
TVP23B-206ENST00000574226 TEX13AQ9BXU3 409 aaPredicted RBP21.97■■□□□ 1.11
TVP23B-206ENST00000574226 PNNQ9H307 717 aaKnown RBP21.97■■□□□ 1.11
TVP23B-206ENST00000574226 CCDC87Q9NVE4 849 aa21.97■■□□□ 1.11
TVP23B-206ENST00000574226 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
TVP23B-206ENST00000574226 HTATSF1O43719 755 aaKnown RBP21.96■■□□□ 1.11
TVP23B-206ENST00000574226 DNAJC10Q8IXB1 793 aa21.96■■□□□ 1.11
TVP23B-206ENST00000574226 SIPA1L3O60292 1781 aaPredicted RBP21.96■■□□□ 1.11
TVP23B-206ENST00000574226 STARD3NLO95772 234 aa21.95■■□□□ 1.1
TVP23B-206ENST00000574226 MMP10P09238 476 aa21.95■■□□□ 1.1
TVP23B-206ENST00000574226 ZNF790Q6PG37 636 aa21.95■■□□□ 1.1
TVP23B-206ENST00000574226 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
TVP23B-206ENST00000574226 CYP19A1P11511 503 aaPredicted RBP21.94■■□□□ 1.1
TVP23B-206ENST00000574226 GYS1P13807 737 aa21.94■■□□□ 1.1
TVP23B-206ENST00000574226 INTS5Q6P9B9 1019 aaKnown RBP21.94■■□□□ 1.1
TVP23B-206ENST00000574226 USP42Q9H9J4 1324 aaKnown RBP21.92■■□□□ 1.1
TVP23B-206ENST00000574226 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
TVP23B-206ENST00000574226 ZPR1O75312 459 aa21.91■■□□□ 1.1
TVP23B-206ENST00000574226 ZEB1P37275 1124 aaPredicted RBP21.91■■□□□ 1.1
TVP23B-206ENST00000574226 DDX10Q13206 875 aaKnown RBP21.91■■□□□ 1.1
TVP23B-206ENST00000574226 FMNL2Q96PY5 1086 aa21.91■■□□□ 1.1
TVP23B-206ENST00000574226 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
TVP23B-206ENST00000574226 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
TVP23B-206ENST00000574226 SOS1Q07889 1333 aaPredicted RBP21.9■■□□□ 1.1
TVP23B-206ENST00000574226 BTBD11A6QL63 1104 aa21.9■■□□□ 1.1
TVP23B-206ENST00000574226 KIF13BQ9NQT8 1826 aa21.9■■□□□ 1.1
TVP23B-206ENST00000574226 ZNF496Q96IT1 587 aaPredicted RBP21.89■■□□□ 1.09
TVP23B-206ENST00000574226 TGFB2P61812 414 aa21.88■■□□□ 1.09
TVP23B-206ENST00000574226 A0A087WZG4 1122 aa21.87■■□□□ 1.09
TVP23B-206ENST00000574226 NARFQ9UHQ1 456 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms