RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
NDE1-205ENST00000572756 CABP4P57796 275 aa21.68■■□□□ 1.06
NDE1-205ENST00000572756 ZEB1P37275 1124 aaPredicted RBP21.67■■□□□ 1.06
NDE1-205ENST00000572756 DDX10Q13206 875 aaKnown RBP21.67■■□□□ 1.06
NDE1-205ENST00000572756 SLC16A10Q8TF71 515 aa21.67■■□□□ 1.06
NDE1-205ENST00000572756 ITPK1Q13572 414 aa21.66■■□□□ 1.06
NDE1-205ENST00000572756 NFATC2IPQ8NCF5 419 aa21.66■■□□□ 1.06
NDE1-205ENST00000572756 LINC00116Q8NCU8 138 aa21.66■■□□□ 1.06
NDE1-205ENST00000572756 RSPH6AQ9H0K4 717 aa21.66■■□□□ 1.06
NDE1-205ENST00000572756 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
NDE1-205ENST00000572756 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
NDE1-205ENST00000572756 COL5A3P25940 1745 aaPredicted RBP21.66■■□□□ 1.06
NDE1-205ENST00000572756 RNMTO43148 476 aaKnown RBP21.65■■□□□ 1.06
NDE1-205ENST00000572756 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
NDE1-205ENST00000572756 PPP1R1BQ9UD71 204 aaPredicted RBP21.65■■□□□ 1.06
NDE1-205ENST00000572756 COL23A1Q86Y22 540 aaPredicted RBP21.64■■□□□ 1.05
NDE1-205ENST00000572756 SLC52A2Q9HAB3 445 aa21.64■■□□□ 1.05
NDE1-205ENST00000572756 CICQ96RK0 1608 aaPredicted RBP21.64■■□□□ 1.05
NDE1-205ENST00000572756 ATP6V1AP38606 617 aa21.63■■□□□ 1.05
NDE1-205ENST00000572756 AMIGO3Q86WK7 504 aa21.63■■□□□ 1.05
NDE1-205ENST00000572756 PRKAR2BP31323 418 aa21.62■■□□□ 1.05
NDE1-205ENST00000572756 GAS2L2Q8NHY3 880 aa21.62■■□□□ 1.05
NDE1-205ENST00000572756 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
NDE1-205ENST00000572756 MAP3K5Q99683 1374 aa21.61■■□□□ 1.05
NDE1-205ENST00000572756 SIPA1L3O60292 1781 aaPredicted RBP21.61■■□□□ 1.05
NDE1-205ENST00000572756 U2AF1L5P0DN76 240 aaPredicted RBP21.61■■□□□ 1.05
NDE1-205ENST00000572756 U2AF1Q01081 240 aaKnown RBP eCLIP21.61■■□□□ 1.05
NDE1-205ENST00000572756 RALBP1Q15311 655 aa21.61■■□□□ 1.05
NDE1-205ENST00000572756 AK7Q96M32 723 aa21.61■■□□□ 1.05
NDE1-205ENST00000572756 TJP1Q07157 1748 aa21.6■■□□□ 1.05
NDE1-205ENST00000572756 MYH14Q7Z406 1995 aaKnown RBP21.6■■□□□ 1.05
NDE1-205ENST00000572756 FCHSD2O94868 740 aa21.6■■□□□ 1.05
NDE1-205ENST00000572756 FLAD1Q8NFF5 587 aa21.6■■□□□ 1.05
NDE1-205ENST00000572756 RBM42Q9BTD8 480 aaKnown RBP21.6■■□□□ 1.05
NDE1-205ENST00000572756 UBR2Q8IWV8 1755 aa21.59■■□□□ 1.05
NDE1-205ENST00000572756 GNAT3A8MTJ3 354 aa21.58■■□□□ 1.05
NDE1-205ENST00000572756 KCPQ6ZWJ8 1503 aa21.57■■□□□ 1.04
NDE1-205ENST00000572756 PTCD1O75127 700 aaKnown RBP21.57■■□□□ 1.04
NDE1-205ENST00000572756 SSFA2P28290 1259 aa21.57■■□□□ 1.04
NDE1-205ENST00000572756 SMIM5Q71RC9 77 aa21.57■■□□□ 1.04
NDE1-205ENST00000572756 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
NDE1-205ENST00000572756 ARXQ96QS3 562 aa21.57■■□□□ 1.04
NDE1-205ENST00000572756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.56■■□□□ 1.04
NDE1-205ENST00000572756 MSH5O43196 834 aa21.56■■□□□ 1.04
NDE1-205ENST00000572756 CEMIPQ8WUJ3 1361 aa21.56■■□□□ 1.04
NDE1-205ENST00000572756 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
NDE1-205ENST00000572756 GNPATO15228 680 aa21.55■■□□□ 1.04
NDE1-205ENST00000572756 RC3H1Q5TC82 1133 aaKnown RBP21.55■■□□□ 1.04
NDE1-205ENST00000572756 POLD1P28340 1107 aa21.54■■□□□ 1.04
NDE1-205ENST00000572756 SLC39A6Q13433 755 aa21.54■■□□□ 1.04
NDE1-205ENST00000572756 FHDC1Q9C0D6 1143 aaPredicted RBP21.54■■□□□ 1.04
NDE1-205ENST00000572756 PHF14O94880 888 aa21.53■■□□□ 1.04
NDE1-205ENST00000572756 DLG5Q8TDM6 1919 aa21.53■■□□□ 1.04
NDE1-205ENST00000572756 MYBBP1AQ9BQG0 1328 aaKnown RBP21.53■■□□□ 1.04
NDE1-205ENST00000572756 SYT17Q9BSW7 474 aa21.52■■□□□ 1.04
NDE1-205ENST00000572756 MSL1Q68DK7 614 aa21.51■■□□□ 1.03
NDE1-205ENST00000572756 PLEKHF1Q96S99 279 aa21.51■■□□□ 1.03
NDE1-205ENST00000572756 C4AP0C0L4 1744 aa21.51■■□□□ 1.03
NDE1-205ENST00000572756 TEFQ10587 303 aa21.5■■□□□ 1.03
NDE1-205ENST00000572756 RTCBQ9Y3I0 505 aaKnown RBP21.5■■□□□ 1.03
NDE1-205ENST00000572756 RPS6KA4O75676 772 aa21.49■■□□□ 1.03
NDE1-205ENST00000572756 CRKLP46109 303 aaKnown RBP21.49■■□□□ 1.03
NDE1-205ENST00000572756 ADRA2BP18089 450 aa21.48■■□□□ 1.03
NDE1-205ENST00000572756 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
NDE1-205ENST00000572756 HTATSF1O43719 755 aaKnown RBP21.47■■□□□ 1.03
NDE1-205ENST00000572756 VSIG10Q8N0Z9 540 aa21.47■■□□□ 1.03
NDE1-205ENST00000572756 PRKRIP1Q9H875 184 aaPredicted RBP21.47■■□□□ 1.03
NDE1-205ENST00000572756 TRAPPC3LQ5T215 181 aa21.46■■□□□ 1.03
NDE1-205ENST00000572756 INTS5Q6P9B9 1019 aaKnown RBP21.46■■□□□ 1.03
NDE1-205ENST00000572756 ZNF790Q6PG37 636 aa21.46■■□□□ 1.03
NDE1-205ENST00000572756 ARHGEF1Q92888 912 aaKnown RBP21.46■■□□□ 1.03
NDE1-205ENST00000572756 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
NDE1-205ENST00000572756 MCM10Q7L590 875 aa21.45■■□□□ 1.02
NDE1-205ENST00000572756 TTC5Q8N0Z6 440 aa21.44■■□□□ 1.02
NDE1-205ENST00000572756 RTF1Q92541 710 aaKnown RBP21.44■■□□□ 1.02
NDE1-205ENST00000572756 ZNF496Q96IT1 587 aaPredicted RBP21.44■■□□□ 1.02
NDE1-205ENST00000572756 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
NDE1-205ENST00000572756 PNNQ9H307 717 aaKnown RBP21.43■■□□□ 1.02
NDE1-205ENST00000572756 CCDC87Q9NVE4 849 aa21.43■■□□□ 1.02
NDE1-205ENST00000572756 HEG1Q9ULI3 1381 aa21.43■■□□□ 1.02
NDE1-205ENST00000572756 NEFMP07197 916 aa21.42■■□□□ 1.02
NDE1-205ENST00000572756 NFE2L2Q16236 605 aa21.42■■□□□ 1.02
NDE1-205ENST00000572756 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
NDE1-205ENST00000572756 BTBD11A6QL63 1104 aa21.41■■□□□ 1.02
NDE1-205ENST00000572756 KCNQ3O43525 872 aa21.41■■□□□ 1.02
NDE1-205ENST00000572756 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
NDE1-205ENST00000572756 GYS1P13807 737 aa21.4■■□□□ 1.02
NDE1-205ENST00000572756 RFC4P35249 363 aa21.4■■□□□ 1.02
NDE1-205ENST00000572756 KLHL34Q8N239 644 aa21.39■■□□□ 1.01
NDE1-205ENST00000572756 NLGN2Q8NFZ4 835 aa21.39■■□□□ 1.01
NDE1-205ENST00000572756 FMNL2Q96PY5 1086 aa21.39■■□□□ 1.01
NDE1-205ENST00000572756 ZBTB1Q9Y2K1 713 aa21.39■■□□□ 1.01
NDE1-205ENST00000572756 USP42Q9H9J4 1324 aaKnown RBP21.38■■□□□ 1.01
NDE1-205ENST00000572756 MAPK8IP3Q9UPT6 1336 aa21.38■■□□□ 1.01
NDE1-205ENST00000572756 NLGN1Q8N2Q7 840 aa21.38■■□□□ 1.01
NDE1-205ENST00000572756 CD2APQ9Y5K6 639 aa21.38■■□□□ 1.01
NDE1-205ENST00000572756 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
NDE1-205ENST00000572756 UTRNP46939 3433 aa21.38■■□□□ 1.01
NDE1-205ENST00000572756 KIF13BQ9NQT8 1826 aa21.37■■□□□ 1.01
NDE1-205ENST00000572756 MMP10P09238 476 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms