RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 GTF2E1P29083 439 aaPredicted RBP6.48□□□□□ -1.37
CDC27-211ENST00000570740 GDF10P55107 478 aa6.48□□□□□ -1.37
CDC27-211ENST00000570740 GAS6Q14393 721 aa6.48□□□□□ -1.37
CDC27-211ENST00000570740 GNASQ5JWF2 1037 aa6.48□□□□□ -1.37
CDC27-211ENST00000570740 TMEM214Q6NUQ4 689 aaKnown RBP6.48□□□□□ -1.37
CDC27-211ENST00000570740 PPARGC1BQ86YN6 1023 aaKnown RBP6.48□□□□□ -1.37
CDC27-211ENST00000570740 A0A1B0GTH6 734 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 POM121CA8CG34 1229 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 PHKA2P46019 1235 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 TLR1Q15399 786 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 EML3Q32P44 896 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 C4orf17Q53FE4 359 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 ZNF385CQ66K41 422 aaPredicted RBP6.47□□□□□ -1.37
CDC27-211ENST00000570740 FOXR1Q6PIV2 292 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 ADAMTS19Q8TE59 1207 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 PCDHGA11Q9Y5H2 935 aa6.47□□□□□ -1.37
CDC27-211ENST00000570740 SRSF11Q05519 484 aaKnown RBP6.46□□□□□ -1.38
CDC27-211ENST00000570740 RHBDD1Q8TEB9 315 aa6.46□□□□□ -1.38
CDC27-211ENST00000570740 GTPBP3Q969Y2 492 aaKnown RBP6.46□□□□□ -1.38
CDC27-211ENST00000570740 TMEM229AB2RXF0 380 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 GPR25O00155 361 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 ADAMTS2O95450 1211 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 THBS1P07996 1170 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 SMTNP53814 917 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 NCOA4Q13772 614 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 HDGFL1Q5TGJ6 251 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 FNBP4Q8N3X1 1017 aaPredicted RBP6.45□□□□□ -1.38
CDC27-211ENST00000570740 SLC4A9Q96Q91 983 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 NUCKS1Q9H1E3 243 aaKnown RBP6.45□□□□□ -1.38
CDC27-211ENST00000570740 MBIPQ9NS73 344 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 NOD1Q9Y239 953 aa6.45□□□□□ -1.38
CDC27-211ENST00000570740 USP17L5A8MUK1 530 aa6.44□□□□□ -1.38
CDC27-211ENST00000570740 LBRQ14739 615 aaKnown RBP6.44□□□□□ -1.38
CDC27-211ENST00000570740 WHAMMQ8TF30 809 aa6.44□□□□□ -1.38
CDC27-211ENST00000570740 CLUAP1Q96AJ1 413 aa6.44□□□□□ -1.38
CDC27-211ENST00000570740 TRERF1Q96PN7 1200 aa6.44□□□□□ -1.38
CDC27-211ENST00000570740 UCN2Q96RP3 112 aa6.44□□□□□ -1.38
CDC27-211ENST00000570740 GPAMQ9HCL2 828 aa6.44□□□□□ -1.38
CDC27-211ENST00000570740 ARHGEF15O94989 841 aa6.43□□□□□ -1.38
CDC27-211ENST00000570740 MSX1P28360 303 aa6.43□□□□□ -1.38
CDC27-211ENST00000570740 GTF2IP78347 998 aa6.43□□□□□ -1.38
CDC27-211ENST00000570740 MTFR1Q15390 333 aa6.43□□□□□ -1.38
CDC27-211ENST00000570740 PROSER2Q86WR7 435 aaPredicted RBP6.43□□□□□ -1.38
CDC27-211ENST00000570740 DEPDC4Q8N2C3 294 aa6.43□□□□□ -1.38
CDC27-211ENST00000570740 SVOPQ8N4V2 548 aa6.43□□□□□ -1.38
CDC27-211ENST00000570740 SERTAD1Q9UHV2 236 aa6.43□□□□□ -1.38
CDC27-211ENST00000570740 ABCC9O60706 1549 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 A6NJY4 79 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 CDK2AP1O14519 115 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 PLA2G4AP47712 749 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 UBAP2LQ14157 1087 aaKnown RBP6.42□□□□□ -1.38
CDC27-211ENST00000570740 LYPD4Q6UWN0 246 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 TBC1D9Q6ZT07 1266 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 PLEKHM2Q8IWE5 1019 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 CFHR5Q9BXR6 569 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 NIFKQ9BYG3 293 aaKnown RBP6.42□□□□□ -1.38
CDC27-211ENST00000570740 ADAMTS8Q9UP79 889 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 IQSEC3Q9UPP2 1182 aaPredicted RBP6.42□□□□□ -1.38
CDC27-211ENST00000570740 IGF1RP08069 1367 aa6.42□□□□□ -1.38
CDC27-211ENST00000570740 A6NJR5 290 aa6.41□□□□□ -1.38
CDC27-211ENST00000570740 ATP9BO43861 1147 aa6.41□□□□□ -1.38
CDC27-211ENST00000570740 CSB-PGBD3P0DP91 1061 aa6.41□□□□□ -1.38
CDC27-211ENST00000570740 ZNF295-AS1Q8N0V1 137 aa6.41□□□□□ -1.38
CDC27-211ENST00000570740 PGBD3Q8N328 593 aa6.41□□□□□ -1.38
CDC27-211ENST00000570740 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
CDC27-211ENST00000570740 RUBCNLQ9H714 662 aa6.41□□□□□ -1.38
CDC27-211ENST00000570740 USP17L3A6NCW0 530 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 USP17L4A6NCW7 530 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 BACH1O14867 736 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 CELA2BP08218 269 aaPredicted RBP6.4□□□□□ -1.38
CDC27-211ENST00000570740 PSME1Q06323 249 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 EFHC2Q5JST6 749 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 USP17L2Q6R6M4 530 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 USP17L1Q7RTZ2 530 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 TRIM50Q86XT4 487 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.4□□□□□ -1.38
CDC27-211ENST00000570740 C1orf216Q8TAB5 229 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 ZNF358Q9NW07 568 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 USP3Q9Y6I4 520 aa6.4□□□□□ -1.38
CDC27-211ENST00000570740 ZBTB7BO15156 539 aaPredicted RBP6.39□□□□□ -1.39
CDC27-211ENST00000570740 MX2P20592 715 aa6.39□□□□□ -1.39
CDC27-211ENST00000570740 KCNMA1Q12791 1236 aa6.39□□□□□ -1.39
CDC27-211ENST00000570740 GLMNQ92990 594 aa6.39□□□□□ -1.39
CDC27-211ENST00000570740 NSFL1CQ9UNZ2 370 aaKnown RBP6.39□□□□□ -1.39
CDC27-211ENST00000570740 PHF24Q9UPV7 400 aa6.39□□□□□ -1.39
CDC27-211ENST00000570740 ATP4AP20648 1035 aa6.38□□□□□ -1.39
CDC27-211ENST00000570740 ATP1A2P50993 1020 aa6.38□□□□□ -1.39
CDC27-211ENST00000570740 EPHA4P54764 986 aa6.38□□□□□ -1.39
CDC27-211ENST00000570740 CLDN10P78369 228 aa6.38□□□□□ -1.39
CDC27-211ENST00000570740 MAP3K10Q02779 954 aa6.38□□□□□ -1.39
CDC27-211ENST00000570740 ERICH6Q7L0X2 663 aa6.38□□□□□ -1.39
CDC27-211ENST00000570740 NDFIP2Q9NV92 336 aa6.38□□□□□ -1.39
CDC27-211ENST00000570740 SCHIP1Q9P0W5 487 aaPredicted RBP6.38□□□□□ -1.39
CDC27-211ENST00000570740 KIAA1024Q9UPX6 916 aa6.38□□□□□ -1.39
CDC27-211ENST00000570740 MAP2K3P46734 347 aa6.37□□□□□ -1.39
CDC27-211ENST00000570740 GSK3AP49840 483 aa6.37□□□□□ -1.39
CDC27-211ENST00000570740 FOXK2Q01167 660 aa6.37□□□□□ -1.39
CDC27-211ENST00000570740 NBPF1Q3BBV0 1214 aa6.37□□□□□ -1.39
CDC27-211ENST00000570740 NLRP8Q86W28 1048 aa6.37□□□□□ -1.39
CDC27-211ENST00000570740 ACDQ96AP0 544 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms