RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ASAP1Q9ULH1 1129 aa23.19■■□□□ 1.3
MAP1LC3B-208ENST00000570189 ATG3Q9NT62 314 aa23.18■■□□□ 1.3
MAP1LC3B-208ENST00000570189 CHD4Q14839 1912 aa23.17■■□□□ 1.3
MAP1LC3B-208ENST00000570189 CC2D1BQ5T0F9 858 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3B-208ENST00000570189 SSFA2P28290 1259 aa23.15■■□□□ 1.3
MAP1LC3B-208ENST00000570189 C1orf141Q5JVX7 400 aa23.15■■□□□ 1.3
MAP1LC3B-208ENST00000570189 AK7Q96M32 723 aa23.15■■□□□ 1.3
MAP1LC3B-208ENST00000570189 MRC1P22897 1456 aa23.15■■□□□ 1.3
MAP1LC3B-208ENST00000570189 DIAPH1O60610 1272 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3B-208ENST00000570189 LINC00116Q8NCU8 138 aa23.14■■□□□ 1.29
MAP1LC3B-208ENST00000570189 ITPK1Q13572 414 aa23.13■■□□□ 1.29
MAP1LC3B-208ENST00000570189 ATP6V1AP38606 617 aa23.12■■□□□ 1.29
MAP1LC3B-208ENST00000570189 AKAP4Q5JQC9 854 aa23.12■■□□□ 1.29
MAP1LC3B-208ENST00000570189 UTRNP46939 3433 aa23.11■■□□□ 1.29
MAP1LC3B-208ENST00000570189 CABP4P57796 275 aa23.11■■□□□ 1.29
MAP1LC3B-208ENST00000570189 AMIGO3Q86WK7 504 aa23.11■■□□□ 1.29
MAP1LC3B-208ENST00000570189 MYH14Q7Z406 1995 aaKnown RBP23.1■■□□□ 1.29
MAP1LC3B-208ENST00000570189 SLC4A9Q96Q91 983 aa23.1■■□□□ 1.29
MAP1LC3B-208ENST00000570189 TJP1Q07157 1748 aa23.09■■□□□ 1.29
MAP1LC3B-208ENST00000570189 RC3H1Q5TC82 1133 aaKnown RBP23.09■■□□□ 1.29
MAP1LC3B-208ENST00000570189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.08■■□□□ 1.29
MAP1LC3B-208ENST00000570189 MSH5O43196 834 aa23.08■■□□□ 1.29
MAP1LC3B-208ENST00000570189 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.28
MAP1LC3B-208ENST00000570189 YY1P25490 414 aa23.07■■□□□ 1.28
MAP1LC3B-208ENST00000570189 HMOX1P09601 288 aa23.06■■□□□ 1.28
MAP1LC3B-208ENST00000570189 NFATC2IPQ8NCF5 419 aa23.06■■□□□ 1.28
MAP1LC3B-208ENST00000570189 ADRA2BP18089 450 aa23.05■■□□□ 1.28
MAP1LC3B-208ENST00000570189 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
MAP1LC3B-208ENST00000570189 UBR2Q8IWV8 1755 aa23.04■■□□□ 1.28
MAP1LC3B-208ENST00000570189 GNPATO15228 680 aa23.04■■□□□ 1.28
MAP1LC3B-208ENST00000570189 SLC52A2Q9HAB3 445 aa23.04■■□□□ 1.28
MAP1LC3B-208ENST00000570189 CD2APQ9Y5K6 639 aa23.04■■□□□ 1.28
MAP1LC3B-208ENST00000570189 MTHFSDQ2M296 383 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3B-208ENST00000570189 MSL1Q68DK7 614 aa23.03■■□□□ 1.28
MAP1LC3B-208ENST00000570189 RBM42Q9BTD8 480 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3B-208ENST00000570189 SIPA1L3O60292 1781 aaPredicted RBP23.03■■□□□ 1.28
MAP1LC3B-208ENST00000570189 GOLGB1Q14789 3259 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3B-208ENST00000570189 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
MAP1LC3B-208ENST00000570189 RNMTO43148 476 aaKnown RBP23.02■■□□□ 1.28
MAP1LC3B-208ENST00000570189 PHF14O94880 888 aa23.02■■□□□ 1.28
MAP1LC3B-208ENST00000570189 NLGN2Q8NFZ4 835 aa23.01■■□□□ 1.27
MAP1LC3B-208ENST00000570189 RTCBQ9Y3I0 505 aaKnown RBP23.01■■□□□ 1.27
MAP1LC3B-208ENST00000570189 KCPQ6ZWJ8 1503 aa23■■□□□ 1.27
MAP1LC3B-208ENST00000570189 LGR6Q9HBX8 967 aa23■■□□□ 1.27
MAP1LC3B-208ENST00000570189 RPS6KA4O75676 772 aa22.99■■□□□ 1.27
MAP1LC3B-208ENST00000570189 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
MAP1LC3B-208ENST00000570189 TRAPPC3LQ5T215 181 aa22.98■■□□□ 1.27
MAP1LC3B-208ENST00000570189 PPP2R1AP30153 589 aa22.97■■□□□ 1.27
MAP1LC3B-208ENST00000570189 SMIM5Q71RC9 77 aa22.97■■□□□ 1.27
MAP1LC3B-208ENST00000570189 KLHL34Q8N239 644 aa22.97■■□□□ 1.27
MAP1LC3B-208ENST00000570189 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
MAP1LC3B-208ENST00000570189 PTCD1O75127 700 aaKnown RBP22.96■■□□□ 1.27
MAP1LC3B-208ENST00000570189 GPR162Q16538 588 aa22.96■■□□□ 1.27
MAP1LC3B-208ENST00000570189 U2SURPO15042 1029 aaKnown RBP22.95■■□□□ 1.26
MAP1LC3B-208ENST00000570189 NLGN1Q8N2Q7 840 aa22.95■■□□□ 1.26
MAP1LC3B-208ENST00000570189 ARHGEF1Q92888 912 aaKnown RBP22.95■■□□□ 1.26
MAP1LC3B-208ENST00000570189 KIAA1551Q9HCM1 1747 aa22.94■■□□□ 1.26
MAP1LC3B-208ENST00000570189 CEMIPQ8WUJ3 1361 aa22.94■■□□□ 1.26
MAP1LC3B-208ENST00000570189 CRKLP46109 303 aaKnown RBP22.94■■□□□ 1.26
MAP1LC3B-208ENST00000570189 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
MAP1LC3B-208ENST00000570189 RSPH6AQ9H0K4 717 aa22.94■■□□□ 1.26
MAP1LC3B-208ENST00000570189 GNAT3A8MTJ3 354 aa22.93■■□□□ 1.26
MAP1LC3B-208ENST00000570189 NUDCQ9Y266 331 aa22.93■■□□□ 1.26
MAP1LC3B-208ENST00000570189 GRIN3BO60391 1043 aa22.92■■□□□ 1.26
MAP1LC3B-208ENST00000570189 GYS1P13807 737 aa22.91■■□□□ 1.26
MAP1LC3B-208ENST00000570189 MMP10P09238 476 aa22.9■■□□□ 1.26
MAP1LC3B-208ENST00000570189 RFC4P35249 363 aa22.9■■□□□ 1.26
MAP1LC3B-208ENST00000570189 CNGB1Q14028 1251 aaPredicted RBP22.9■■□□□ 1.26
MAP1LC3B-208ENST00000570189 INTS5Q6P9B9 1019 aaKnown RBP22.9■■□□□ 1.26
MAP1LC3B-208ENST00000570189 FCHSD2O94868 740 aa22.89■■□□□ 1.25
MAP1LC3B-208ENST00000570189 YBX3P16989 372 aaKnown RBP eCLIP22.89■■□□□ 1.257e-9■□□□□ 8.1
MAP1LC3B-208ENST00000570189 PRKAR2BP31323 418 aa22.89■■□□□ 1.25
MAP1LC3B-208ENST00000570189 IL17REQ8NFR9 667 aa22.89■■□□□ 1.25
MAP1LC3B-208ENST00000570189 C10orf71Q711Q0 1435 aa22.89■■□□□ 1.25
MAP1LC3B-208ENST00000570189 USP42Q9H9J4 1324 aaKnown RBP22.88■■□□□ 1.25
MAP1LC3B-208ENST00000570189 BRCA1P38398 1863 aaKnown RBP22.88■■□□□ 1.25
MAP1LC3B-208ENST00000570189 CYP19A1P11511 503 aaPredicted RBP22.88■■□□□ 1.25
MAP1LC3B-208ENST00000570189 SLC39A6Q13433 755 aa22.88■■□□□ 1.25
MAP1LC3B-208ENST00000570189 DNAJC10Q8IXB1 793 aa22.88■■□□□ 1.25
MAP1LC3B-208ENST00000570189 PHACTR3Q96KR7 559 aa22.88■■□□□ 1.25
MAP1LC3B-208ENST00000570189 CCDC87Q9NVE4 849 aa22.88■■□□□ 1.25
MAP1LC3B-208ENST00000570189 SOS1Q07889 1333 aaPredicted RBP22.86■■□□□ 1.25
MAP1LC3B-208ENST00000570189 ZNF784Q8NCA9 323 aaPredicted RBP22.86■■□□□ 1.25
MAP1LC3B-208ENST00000570189 TEFQ10587 303 aa22.85■■□□□ 1.25
MAP1LC3B-208ENST00000570189 PXDNLA1KZ92 1463 aa22.85■■□□□ 1.25
MAP1LC3B-208ENST00000570189 N4BP2Q86UW6 1770 aaPredicted RBP22.84■■□□□ 1.25
MAP1LC3B-208ENST00000570189 U2AF1L5P0DN76 240 aaPredicted RBP22.84■■□□□ 1.25
MAP1LC3B-208ENST00000570189 TGFB2P61812 414 aa22.84■■□□□ 1.25
MAP1LC3B-208ENST00000570189 U2AF1Q01081 240 aaKnown RBP eCLIP22.84■■□□□ 1.251e-6■■□□□ 13.5
MAP1LC3B-208ENST00000570189 ZNF790Q6PG37 636 aa22.84■■□□□ 1.25
MAP1LC3B-208ENST00000570189 DLG5Q8TDM6 1919 aa22.83■■□□□ 1.25
MAP1LC3B-208ENST00000570189 PELP1Q8IZL8 1130 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3B-208ENST00000570189 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.25
MAP1LC3B-208ENST00000570189 HEG1Q9ULI3 1381 aa22.83■■□□□ 1.25
MAP1LC3B-208ENST00000570189 NRXN2Q9P2S2 1712 aa22.82■■□□□ 1.24
MAP1LC3B-208ENST00000570189 HTATSF1O43719 755 aaKnown RBP22.82■■□□□ 1.24
MAP1LC3B-208ENST00000570189 TEX13AQ9BXU3 409 aaPredicted RBP22.82■■□□□ 1.24
MAP1LC3B-208ENST00000570189 COL15A1P39059 1388 aa22.81■■□□□ 1.24
MAP1LC3B-208ENST00000570189 PARP3Q9Y6F1 533 aa22.81■■□□□ 1.24
MAP1LC3B-208ENST00000570189 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms