RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
CDT1-203ENST00000569140 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.31
CDT1-203ENST00000569140 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
CDT1-203ENST00000569140 MCM10Q7L590 875 aa16.94■□□□□ 0.3
CDT1-203ENST00000569140 PLEKHF1Q96S99 279 aa16.94■□□□□ 0.3
CDT1-203ENST00000569140 MRC1P22897 1456 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 PAPPAQ13219 1627 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 PTCD1O75127 700 aaKnown RBP16.93■□□□□ 0.3
CDT1-203ENST00000569140 ATP6V1AP38606 617 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 SIK1P57059 783 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 NFE2L2Q16236 605 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 CCDC184Q52MB2 194 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 C5P01031 1676 aa16.93■□□□□ 0.3
CDT1-203ENST00000569140 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
CDT1-203ENST00000569140 DCTN1Q14203 1278 aa16.92■□□□□ 0.3
CDT1-203ENST00000569140 SLC15A2Q16348 729 aa16.92■□□□□ 0.3
CDT1-203ENST00000569140 ZNF827Q17R98 1081 aa16.92■□□□□ 0.3
CDT1-203ENST00000569140 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
CDT1-203ENST00000569140 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
CDT1-203ENST00000569140 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
CDT1-203ENST00000569140 TFCP2L1Q9NZI6 479 aa16.91■□□□□ 0.3
CDT1-203ENST00000569140 RRP7AQ9Y3A4 280 aaKnown RBP16.91■□□□□ 0.3
CDT1-203ENST00000569140 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
CDT1-203ENST00000569140 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
CDT1-203ENST00000569140 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
CDT1-203ENST00000569140 AK7Q96M32 723 aa16.9■□□□□ 0.3
CDT1-203ENST00000569140 MSH5O43196 834 aa16.89■□□□□ 0.29
CDT1-203ENST00000569140 RIPK4P57078 832 aa16.89■□□□□ 0.29
CDT1-203ENST00000569140 C4BP0C0L5 1744 aa16.88■□□□□ 0.29
CDT1-203ENST00000569140 BTBD11A6QL63 1104 aa16.88■□□□□ 0.29
CDT1-203ENST00000569140 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
CDT1-203ENST00000569140 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
CDT1-203ENST00000569140 CEMIPQ8WUJ3 1361 aa16.88■□□□□ 0.29
CDT1-203ENST00000569140 HTATSF1O43719 755 aaKnown RBP16.87■□□□□ 0.29
CDT1-203ENST00000569140 TMPOP42166 694 aaKnown RBP16.87■□□□□ 0.29
CDT1-203ENST00000569140 ITPK1Q13572 414 aa16.87■□□□□ 0.29
CDT1-203ENST00000569140 LINC00116Q8NCU8 138 aa16.87■□□□□ 0.29
CDT1-203ENST00000569140 AKT1S1Q96B36 256 aa16.87■□□□□ 0.29
CDT1-203ENST00000569140 THUMPD2Q9BTF0 503 aaKnown RBP16.87■□□□□ 0.29
CDT1-203ENST00000569140 PHF14O94880 888 aa16.86■□□□□ 0.29
CDT1-203ENST00000569140 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
CDT1-203ENST00000569140 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
CDT1-203ENST00000569140 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
CDT1-203ENST00000569140 PDGFDQ9GZP0 370 aaPredicted RBP16.85■□□□□ 0.29
CDT1-203ENST00000569140 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
CDT1-203ENST00000569140 GNPATO15228 680 aa16.84■□□□□ 0.29
CDT1-203ENST00000569140 ZBTB7AO95365 584 aa16.84■□□□□ 0.29
CDT1-203ENST00000569140 FAM9BQ8IZU0 186 aa16.84■□□□□ 0.29
CDT1-203ENST00000569140 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
CDT1-203ENST00000569140 KCPQ6ZWJ8 1503 aa16.84■□□□□ 0.29
CDT1-203ENST00000569140 TJP1Q07157 1748 aa16.83■□□□□ 0.28
CDT1-203ENST00000569140 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
CDT1-203ENST00000569140 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
CDT1-203ENST00000569140 PNPLA7Q6ZV29 1317 aa16.83■□□□□ 0.28
CDT1-203ENST00000569140 CASZ1Q86V15 1759 aa16.83■□□□□ 0.28
CDT1-203ENST00000569140 APAF1O14727 1248 aa16.82■□□□□ 0.28
CDT1-203ENST00000569140 TAF7Q15545 349 aaPredicted RBP16.82■□□□□ 0.28
CDT1-203ENST00000569140 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
CDT1-203ENST00000569140 PNISRQ8TF01 805 aaKnown RBP16.82■□□□□ 0.28
CDT1-203ENST00000569140 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
CDT1-203ENST00000569140 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
CDT1-203ENST00000569140 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
CDT1-203ENST00000569140 QSER1Q2KHR3 1735 aa16.82■□□□□ 0.28
CDT1-203ENST00000569140 ZNF831Q5JPB2 1677 aa16.81■□□□□ 0.28
CDT1-203ENST00000569140 KCNQ3O43525 872 aa16.81■□□□□ 0.28
CDT1-203ENST00000569140 SMIM5Q71RC9 77 aa16.81■□□□□ 0.28
CDT1-203ENST00000569140 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
CDT1-203ENST00000569140 ATF5Q9Y2D1 282 aaPredicted RBP16.81■□□□□ 0.28
CDT1-203ENST00000569140 LAS1LQ9Y4W2 734 aaKnown RBP16.81■□□□□ 0.28
CDT1-203ENST00000569140 CRKLP46109 303 aaKnown RBP16.8■□□□□ 0.28
CDT1-203ENST00000569140 ZNF496Q96IT1 587 aaPredicted RBP16.8■□□□□ 0.28
CDT1-203ENST00000569140 SPON1Q9HCB6 807 aa16.8■□□□□ 0.28
CDT1-203ENST00000569140 CNTNAP4Q9C0A0 1308 aa16.79■□□□□ 0.28
CDT1-203ENST00000569140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.79■□□□□ 0.28
CDT1-203ENST00000569140 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
CDT1-203ENST00000569140 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
CDT1-203ENST00000569140 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
CDT1-203ENST00000569140 HEG1Q9ULI3 1381 aa16.78■□□□□ 0.28
CDT1-203ENST00000569140 LRP5O75197 1615 aa16.78■□□□□ 0.28
CDT1-203ENST00000569140 UBR3Q6ZT12 1888 aa16.78■□□□□ 0.28
CDT1-203ENST00000569140 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
CDT1-203ENST00000569140 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
CDT1-203ENST00000569140 SSFA2P28290 1259 aa16.77■□□□□ 0.28
CDT1-203ENST00000569140 MSL1Q68DK7 614 aa16.77■□□□□ 0.28
CDT1-203ENST00000569140 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
CDT1-203ENST00000569140 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
CDT1-203ENST00000569140 MTFR1LQ9H019 292 aa16.77■□□□□ 0.28
CDT1-203ENST00000569140 CCDC87Q9NVE4 849 aa16.77■□□□□ 0.28
CDT1-203ENST00000569140 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.28
CDT1-203ENST00000569140 ZNF330Q9Y3S2 320 aaPredicted RBP16.77■□□□□ 0.28
CDT1-203ENST00000569140 CICQ96RK0 1608 aaPredicted RBP16.77■□□□□ 0.27
CDT1-203ENST00000569140 STARD3NLO95772 234 aa16.76■□□□□ 0.27
CDT1-203ENST00000569140 SALL2Q9Y467 1007 aaPredicted RBP16.76■□□□□ 0.27
CDT1-203ENST00000569140 KDM3BQ7LBC6 1761 aa16.76■□□□□ 0.27
CDT1-203ENST00000569140 CYP19A1P11511 503 aaPredicted RBP16.75■□□□□ 0.27
CDT1-203ENST00000569140 CANXP27824 592 aaKnown RBP16.75■□□□□ 0.27
CDT1-203ENST00000569140 TRAPPC3LQ5T215 181 aa16.75■□□□□ 0.27
CDT1-203ENST00000569140 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms