RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 IL2RBP14784 551 aa11.53□□□□□ -0.56
KLHDC4-220ENST00000568338 PPP2R1AP30153 589 aa11.53□□□□□ -0.56
KLHDC4-220ENST00000568338 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
KLHDC4-220ENST00000568338 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
KLHDC4-220ENST00000568338 NME9Q86XW9 330 aa11.52□□□□□ -0.57
KLHDC4-220ENST00000568338 COG3Q96JB2 828 aa11.52□□□□□ -0.57
KLHDC4-220ENST00000568338 CD2APQ9Y5K6 639 aa11.52□□□□□ -0.57
KLHDC4-220ENST00000568338 MSL1Q68DK7 614 aa11.51□□□□□ -0.57
KLHDC4-220ENST00000568338 USP31Q70CQ4 1352 aa11.51□□□□□ -0.57
KLHDC4-220ENST00000568338 KIF3CO14782 793 aa11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 TNNT2P45379 298 aaPredicted RBP11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 KCNQ4P56696 695 aa11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 CCDC184Q52MB2 194 aa11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 SYTL4Q96C24 671 aaPredicted RBP11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 ERBB3P21860 1342 aa11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 GOLGB1Q14789 3259 aaKnown RBP11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 NFAT5O94916 1531 aa11.5□□□□□ -0.57
KLHDC4-220ENST00000568338 RGPD5Q99666 1765 aa11.49□□□□□ -0.57
KLHDC4-220ENST00000568338 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
KLHDC4-220ENST00000568338 COL13A1Q5TAT6 717 aaPredicted RBP11.49□□□□□ -0.57
KLHDC4-220ENST00000568338 TNS4Q8IZW8 715 aa11.49□□□□□ -0.57
KLHDC4-220ENST00000568338 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
KLHDC4-220ENST00000568338 TOMM70O94826 608 aa11.48□□□□□ -0.57
KLHDC4-220ENST00000568338 COL23A1Q86Y22 540 aaPredicted RBP11.48□□□□□ -0.57
KLHDC4-220ENST00000568338 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
KLHDC4-220ENST00000568338 PHF12Q96QT6 1004 aa11.48□□□□□ -0.57
KLHDC4-220ENST00000568338 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
KLHDC4-220ENST00000568338 CCNL1Q9UK58 526 aaPredicted RBP11.48□□□□□ -0.57
KLHDC4-220ENST00000568338 SMG6Q86US8 1419 aaKnown RBP11.48□□□□□ -0.57
KLHDC4-220ENST00000568338 TUBGCP6Q96RT7 1819 aa11.48□□□□□ -0.57
KLHDC4-220ENST00000568338 CLCN6P51797 869 aa11.47□□□□□ -0.57
KLHDC4-220ENST00000568338 PRELPP51888 382 aa11.47□□□□□ -0.57
KLHDC4-220ENST00000568338 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
KLHDC4-220ENST00000568338 IGSF1Q8N6C5 1336 aa11.46□□□□□ -0.57
KLHDC4-220ENST00000568338 NUBP1P53384 320 aa11.46□□□□□ -0.57
KLHDC4-220ENST00000568338 ANKRD24Q8TF21 1146 aa11.46□□□□□ -0.57
KLHDC4-220ENST00000568338 WWC3Q9ULE0 1092 aa11.46□□□□□ -0.57
KLHDC4-220ENST00000568338 PRIM1P49642 420 aaKnown RBP11.45□□□□□ -0.58
KLHDC4-220ENST00000568338 MTHFSP49914 203 aa11.45□□□□□ -0.58
KLHDC4-220ENST00000568338 FAM9BQ8IZU0 186 aa11.45□□□□□ -0.58
KLHDC4-220ENST00000568338 PNISRQ8TF01 805 aaKnown RBP11.45□□□□□ -0.58
KLHDC4-220ENST00000568338 COL3A1P02461 1466 aaPredicted RBP11.44□□□□□ -0.58
KLHDC4-220ENST00000568338 FLAD1Q8NFF5 587 aa11.44□□□□□ -0.58
KLHDC4-220ENST00000568338 YTHDC1Q96MU7 727 aaKnown RBP11.44□□□□□ -0.58
KLHDC4-220ENST00000568338 LTN1O94822 1766 aa11.44□□□□□ -0.58
KLHDC4-220ENST00000568338 INSRP06213 1382 aa11.43□□□□□ -0.58
KLHDC4-220ENST00000568338 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
KLHDC4-220ENST00000568338 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
KLHDC4-220ENST00000568338 KLRG1Q96E93 195 aa11.43□□□□□ -0.58
KLHDC4-220ENST00000568338 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
KLHDC4-220ENST00000568338 LY75O60449 1722 aa11.43□□□□□ -0.58
KLHDC4-220ENST00000568338 DOT1LQ8TEK3 1739 aa11.43□□□□□ -0.58
KLHDC4-220ENST00000568338 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
KLHDC4-220ENST00000568338 KIF24Q5T7B8 1368 aa11.42□□□□□ -0.58
KLHDC4-220ENST00000568338 C16orf71Q8IYS4 520 aaPredicted RBP11.42□□□□□ -0.58
KLHDC4-220ENST00000568338 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
KLHDC4-220ENST00000568338 RTL1A6NKG5 1358 aa11.41□□□□□ -0.58
KLHDC4-220ENST00000568338 GALR2O43603 387 aaPredicted RBP11.41□□□□□ -0.58
KLHDC4-220ENST00000568338 RRS1Q15050 365 aaKnown RBP11.41□□□□□ -0.58
KLHDC4-220ENST00000568338 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
KLHDC4-220ENST00000568338 CICQ96RK0 1608 aaPredicted RBP11.41□□□□□ -0.58
KLHDC4-220ENST00000568338 FLT4P35916 1363 aa11.41□□□□□ -0.58
KLHDC4-220ENST00000568338 PPM1GO15355 546 aaPredicted RBP11.4□□□□□ -0.58
KLHDC4-220ENST00000568338 RBM46Q8TBY0 533 aaKnown RBP11.4□□□□□ -0.58
KLHDC4-220ENST00000568338 NUDCQ9Y266 331 aa11.4□□□□□ -0.58
KLHDC4-220ENST00000568338 MAP3K19Q56UN5 1328 aa11.39□□□□□ -0.59
KLHDC4-220ENST00000568338 DIAPH1O60610 1272 aaKnown RBP11.39□□□□□ -0.59
KLHDC4-220ENST00000568338 FBLN1P23142 703 aa11.39□□□□□ -0.59
KLHDC4-220ENST00000568338 HTRA3P83110 453 aa11.39□□□□□ -0.59
KLHDC4-220ENST00000568338 NMRK2Q9NPI5 230 aa11.39□□□□□ -0.59
KLHDC4-220ENST00000568338 C5P01031 1676 aa11.39□□□□□ -0.59
KLHDC4-220ENST00000568338 AMPHP49418 695 aa11.38□□□□□ -0.59
KLHDC4-220ENST00000568338 FSTL1Q12841 308 aa11.38□□□□□ -0.59
KLHDC4-220ENST00000568338 LTV1Q96GA3 475 aaPredicted RBP11.38□□□□□ -0.59
KLHDC4-220ENST00000568338 AK7Q96M32 723 aa11.38□□□□□ -0.59
KLHDC4-220ENST00000568338 FAM208AQ9UK61 1670 aaKnown RBP11.37□□□□□ -0.59
KLHDC4-220ENST00000568338 PHF14O94880 888 aa11.37□□□□□ -0.59
KLHDC4-220ENST00000568338 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
KLHDC4-220ENST00000568338 IFNLR1Q8IU57 520 aaPredicted RBP11.37□□□□□ -0.59
KLHDC4-220ENST00000568338 ZCRB1Q8TBF4 217 aaKnown RBP11.37□□□□□ -0.59
KLHDC4-220ENST00000568338 ADAMTS8Q9UP79 889 aa11.37□□□□□ -0.59
KLHDC4-220ENST00000568338 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
KLHDC4-220ENST00000568338 PALLDQ8WX93 1383 aa11.36□□□□□ -0.59
KLHDC4-220ENST00000568338 U2SURPO15042 1029 aaKnown RBP11.35□□□□□ -0.59
KLHDC4-220ENST00000568338 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
KLHDC4-220ENST00000568338 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
KLHDC4-220ENST00000568338 HOXC9P31274 260 aa11.35□□□□□ -0.59
KLHDC4-220ENST00000568338 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
KLHDC4-220ENST00000568338 ARHGAP27Q6ZUM4 889 aa11.35□□□□□ -0.59
KLHDC4-220ENST00000568338 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
KLHDC4-220ENST00000568338 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
KLHDC4-220ENST00000568338 PLEKHG2Q9H7P9 1386 aa11.34□□□□□ -0.59
KLHDC4-220ENST00000568338 SLC34A2O95436 690 aa11.34□□□□□ -0.59
KLHDC4-220ENST00000568338 IL13P35225 146 aa11.34□□□□□ -0.59
KLHDC4-220ENST00000568338 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
KLHDC4-220ENST00000568338 IP6K1Q92551 441 aa11.34□□□□□ -0.59
KLHDC4-220ENST00000568338 KIF12Q96FN5 646 aa11.34□□□□□ -0.59
KLHDC4-220ENST00000568338 KDM2BQ8NHM5 1336 aa11.34□□□□□ -0.59
KLHDC4-220ENST00000568338 C4BP0C0L5 1744 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms