RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
FANCA-227ENST00000567883 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
FANCA-227ENST00000567883 HSPA6P17066 643 aa15.3■□□□□ 0.04
FANCA-227ENST00000567883 EIF4A2Q14240 407 aaKnown RBP15.3■□□□□ 0.04
FANCA-227ENST00000567883 CICQ96RK0 1608 aaPredicted RBP15.3■□□□□ 0.04
FANCA-227ENST00000567883 KDRP35968 1356 aa15.29■□□□□ 0.04
FANCA-227ENST00000567883 TRAPPC3LQ5T215 181 aa15.29■□□□□ 0.04
FANCA-227ENST00000567883 RC3H1Q5TC82 1133 aaKnown RBP15.29■□□□□ 0.04
FANCA-227ENST00000567883 NLGN1Q8N2Q7 840 aa15.29■□□□□ 0.04
FANCA-227ENST00000567883 KIAA1551Q9HCM1 1747 aa15.29■□□□□ 0.04
FANCA-227ENST00000567883 MMP10P09238 476 aa15.28■□□□□ 0.04
FANCA-227ENST00000567883 TGFB2P61812 414 aa15.28■□□□□ 0.04
FANCA-227ENST00000567883 ZNF526Q8TF50 670 aaPredicted RBP15.28■□□□□ 0.04
FANCA-227ENST00000567883 RTCBQ9Y3I0 505 aaKnown RBP15.28■□□□□ 0.04
FANCA-227ENST00000567883 COL5A3P25940 1745 aaPredicted RBP15.28■□□□□ 0.04
FANCA-227ENST00000567883 HSP90AB1P08238 724 aaKnown RBP15.27■□□□□ 0.04
FANCA-227ENST00000567883 ADRA2BP18089 450 aa15.27■□□□□ 0.04
FANCA-227ENST00000567883 TRIM26Q12899 539 aaPredicted RBP15.27■□□□□ 0.04
FANCA-227ENST00000567883 DCAF5Q96JK2 942 aa15.27■□□□□ 0.04
FANCA-227ENST00000567883 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
FANCA-227ENST00000567883 PXDNLA1KZ92 1463 aa15.27■□□□□ 0.03
FANCA-227ENST00000567883 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
FANCA-227ENST00000567883 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
FANCA-227ENST00000567883 CNTNAP4Q9C0A0 1308 aa15.25■□□□□ 0.03
FANCA-227ENST00000567883 KIF3CO14782 793 aa15.25■□□□□ 0.03
FANCA-227ENST00000567883 PLEKHO1Q53GL0 409 aaPredicted RBP15.25■□□□□ 0.03
FANCA-227ENST00000567883 ARHGEF1Q92888 912 aaKnown RBP15.25■□□□□ 0.03
FANCA-227ENST00000567883 MYH14Q7Z406 1995 aaKnown RBP15.25■□□□□ 0.03
FANCA-227ENST00000567883 C10orf71Q711Q0 1435 aa15.25■□□□□ 0.03
FANCA-227ENST00000567883 RPS6KA4O75676 772 aa15.24■□□□□ 0.03
FANCA-227ENST00000567883 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
FANCA-227ENST00000567883 RBM42Q9BTD8 480 aaKnown RBP15.24■□□□□ 0.03
FANCA-227ENST00000567883 BRCA1P38398 1863 aaKnown RBP15.24■□□□□ 0.03
FANCA-227ENST00000567883 C4AP0C0L4 1744 aa15.23■□□□□ 0.03
FANCA-227ENST00000567883 GYS1P13807 737 aa15.23■□□□□ 0.03
FANCA-227ENST00000567883 RFC4P35249 363 aa15.23■□□□□ 0.03
FANCA-227ENST00000567883 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
FANCA-227ENST00000567883 CCDC87Q9NVE4 849 aa15.23■□□□□ 0.03
FANCA-227ENST00000567883 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
FANCA-227ENST00000567883 A0A0G2JLW4 131 aa15.22■□□□□ 0.03
FANCA-227ENST00000567883 CABP4P57796 275 aa15.22■□□□□ 0.03
FANCA-227ENST00000567883 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
FANCA-227ENST00000567883 KDM6AO15550 1401 aaPredicted RBP15.22■□□□□ 0.03
FANCA-227ENST00000567883 PARP3Q9Y6F1 533 aa15.21■□□□□ 0.03
FANCA-227ENST00000567883 ARFGEF1Q9Y6D6 1849 aa15.21■□□□□ 0.03
FANCA-227ENST00000567883 TOMM70O94826 608 aa15.2■□□□□ 0.02
FANCA-227ENST00000567883 DPEP1P16444 411 aa15.2■□□□□ 0.02
FANCA-227ENST00000567883 ZNF530Q6P9A1 599 aaPredicted RBP15.2■□□□□ 0.02
FANCA-227ENST00000567883 POLR3GLQ9BT43 218 aa15.2■□□□□ 0.02
FANCA-227ENST00000567883 KCNA3P22001 575 aa15.19■□□□□ 0.02
FANCA-227ENST00000567883 MTHFSP49914 203 aa15.19■□□□□ 0.02
FANCA-227ENST00000567883 ARHGAP27Q6ZUM4 889 aa15.19■□□□□ 0.02
FANCA-227ENST00000567883 PANK3Q9H999 370 aa15.19■□□□□ 0.02
FANCA-227ENST00000567883 PCNTO95613 3336 aa15.18■□□□□ 0.02
FANCA-227ENST00000567883 FCHSD2O94868 740 aa15.18■□□□□ 0.02
FANCA-227ENST00000567883 APLP1P51693 650 aa15.18■□□□□ 0.02
FANCA-227ENST00000567883 C1orf141Q5JVX7 400 aa15.18■□□□□ 0.02
FANCA-227ENST00000567883 NFATC2IPQ8NCF5 419 aa15.18■□□□□ 0.02
FANCA-227ENST00000567883 SCN11AQ9UI33 1791 aa15.17■□□□□ 0.02
FANCA-227ENST00000567883 CRKLP46109 303 aaKnown RBP15.17■□□□□ 0.02
FANCA-227ENST00000567883 EIF4G2P78344 907 aaKnown RBP eCLIP15.17■□□□□ 0.02
FANCA-227ENST00000567883 PTCD1O75127 700 aaKnown RBP15.16■□□□□ 0.02
FANCA-227ENST00000567883 AEBP1Q8IUX7 1158 aa15.16■□□□□ 0.02
FANCA-227ENST00000567883 PIM2Q9P1W9 311 aa15.16■□□□□ 0.02
FANCA-227ENST00000567883 TJP1Q07157 1748 aa15.16■□□□□ 0.02
FANCA-227ENST00000567883 USP42Q9H9J4 1324 aaKnown RBP15.16■□□□□ 0.02
FANCA-227ENST00000567883 MORC1Q86VD1 984 aa15.15■□□□□ 0.02
FANCA-227ENST00000567883 ADAMTS7Q9UKP4 1686 aa15.14■□□□□ 0.01
FANCA-227ENST00000567883 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
FANCA-227ENST00000567883 FKBP8Q14318 412 aa15.14■□□□□ 0.01
FANCA-227ENST00000567883 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
FANCA-227ENST00000567883 DNAJC5GQ8N7S2 189 aa15.14■□□□□ 0.01
FANCA-227ENST00000567883 SBF1O95248 1867 aa15.13■□□□□ 0.01
FANCA-227ENST00000567883 DDR1Q08345 913 aa15.13■□□□□ 0.01
FANCA-227ENST00000567883 DALRD3Q5D0E6 543 aaKnown RBP15.13■□□□□ 0.01
FANCA-227ENST00000567883 C9orf131Q5VYM1 1079 aa15.13■□□□□ 0.01
FANCA-227ENST00000567883 INTS5Q6P9B9 1019 aaKnown RBP15.13■□□□□ 0.01
FANCA-227ENST00000567883 RBM46Q8TBY0 533 aaKnown RBP15.13■□□□□ 0.01
FANCA-227ENST00000567883 NMRK2Q9NPI5 230 aa15.13■□□□□ 0.01
FANCA-227ENST00000567883 SRP68Q9UHB9 627 aaKnown RBP15.13■□□□□ 0.01
FANCA-227ENST00000567883 TM4SF1P30408 202 aa15.12■□□□□ 0.01
FANCA-227ENST00000567883 IL13P35225 146 aa15.12■□□□□ 0.01
FANCA-227ENST00000567883 AKAP4Q5JQC9 854 aa15.12■□□□□ 0.01
FANCA-227ENST00000567883 VIRMAQ69YN4 1812 aaKnown RBP15.11■□□□□ 0.01
FANCA-227ENST00000567883 POLRMTO00411 1230 aaKnown RBP15.11■□□□□ 0.01
FANCA-227ENST00000567883 KNSTRNQ9Y448 316 aa15.11■□□□□ 0.01
FANCA-227ENST00000567883 WDR90Q96KV7 1748 aa15.11■□□□□ 0.01
FANCA-227ENST00000567883 SLC52A2Q9HAB3 445 aa15.1■□□□□ 0.01
FANCA-227ENST00000567883 KDM2BQ8NHM5 1336 aa15.1■□□□□ 0.01
FANCA-227ENST00000567883 AFDNP55196 1824 aaKnown RBP15.09■□□□□ 0.01
FANCA-227ENST00000567883 ZPR1O75312 459 aa15.09■□□□□ 0.01
FANCA-227ENST00000567883 FSTL1Q12841 308 aa15.09■□□□□ 0.01
FANCA-227ENST00000567883 CYP19A1P11511 503 aaPredicted RBP15.08■□□□□ 0
FANCA-227ENST00000567883 CHRNA5P30532 468 aa15.08■□□□□ 0
FANCA-227ENST00000567883 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0
FANCA-227ENST00000567883 DNAJC10Q8IXB1 793 aa15.08■□□□□ 0
FANCA-227ENST00000567883 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0
FANCA-227ENST00000567883 LGR6Q9HBX8 967 aa15.08■□□□□ 0
FANCA-227ENST00000567883 RNF181Q9P0P0 153 aa15.08■□□□□ 0
FANCA-227ENST00000567883 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms