RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 CCDC8Q9H0W5 538 aaPredicted RBP13.87□□□□□ -0.19
SIN3A-208ENST00000567289 LMBRD1Q9NUN5 540 aa13.87□□□□□ -0.19
SIN3A-208ENST00000567289 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
SIN3A-208ENST00000567289 PTGS1P23219 599 aa13.87□□□□□ -0.19
SIN3A-208ENST00000567289 DHX37Q8IY37 1157 aaKnown RBP13.87□□□□□ -0.19
SIN3A-208ENST00000567289 UBXN4Q92575 508 aa13.87□□□□□ -0.19
SIN3A-208ENST00000567289 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
SIN3A-208ENST00000567289 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
SIN3A-208ENST00000567289 CCDC34Q96HJ3 373 aa13.86□□□□□ -0.19
SIN3A-208ENST00000567289 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
SIN3A-208ENST00000567289 VAMP4O75379 141 aa13.86□□□□□ -0.19
SIN3A-208ENST00000567289 URI1O94763 535 aaPredicted RBP13.86□□□□□ -0.19
SIN3A-208ENST00000567289 TRIM29Q14134 588 aa13.86□□□□□ -0.19
SIN3A-208ENST00000567289 CPLX2Q6PUV4 134 aaKnown RBP13.86□□□□□ -0.19
SIN3A-208ENST00000567289 PRIMPOLQ96LW4 560 aa13.86□□□□□ -0.19
SIN3A-208ENST00000567289 ASXL1Q8IXJ9 1541 aa13.86□□□□□ -0.19
SIN3A-208ENST00000567289 ZBTB7BO15156 539 aaPredicted RBP13.86□□□□□ -0.19
SIN3A-208ENST00000567289 CCDC94Q9BW85 323 aaPredicted RBP13.86□□□□□ -0.19
SIN3A-208ENST00000567289 ADAMTS12P58397 1594 aa13.85□□□□□ -0.19
SIN3A-208ENST00000567289 PCMTD1Q96MG8 357 aaPredicted RBP13.85□□□□□ -0.19
SIN3A-208ENST00000567289 UBE2HP62256 183 aa13.85□□□□□ -0.19
SIN3A-208ENST00000567289 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
SIN3A-208ENST00000567289 MRPL50Q8N5N7 158 aaKnown RBP13.85□□□□□ -0.19
SIN3A-208ENST00000567289 ZSWIM4Q9H7M6 989 aa13.85□□□□□ -0.19
SIN3A-208ENST00000567289 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
SIN3A-208ENST00000567289 TRDNQ13061 729 aa13.85□□□□□ -0.19
SIN3A-208ENST00000567289 TPM1P09493 284 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 TAF7Q15545 349 aaPredicted RBP13.84□□□□□ -0.19
SIN3A-208ENST00000567289 TSR1Q2NL82 804 aaKnown RBP13.84□□□□□ -0.19
SIN3A-208ENST00000567289 HSP90AA4PQ58FG1 418 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 LUZP1Q86V48 1076 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 DACT1Q9NYF0 836 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 MYL6BP14649 208 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 KIF18AQ8NI77 898 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 LRRC2Q9BYS8 371 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 ZMYM4Q5VZL5 1548 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 GRIN2AQ12879 1464 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 CEP57L1Q8IYX8 460 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
SIN3A-208ENST00000567289 DDX58O95786 925 aaKnown RBP13.83□□□□□ -0.2
SIN3A-208ENST00000567289 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
SIN3A-208ENST00000567289 CCT2P78371 535 aaKnown RBP13.83□□□□□ -0.2
SIN3A-208ENST00000567289 ANO6Q4KMQ2 910 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 ESYT1Q9BSJ8 1104 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 CFAP100Q494V2 611 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 OLFM4Q6UX06 510 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 DNAJC25Q9H1X3 360 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 ANKRD44Q8N8A2 993 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 JARID2Q92833 1246 aaPredicted RBP13.83□□□□□ -0.2
SIN3A-208ENST00000567289 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
SIN3A-208ENST00000567289 SYTL4Q96C24 671 aaPredicted RBP13.82□□□□□ -0.2
SIN3A-208ENST00000567289 VGLL3A8MV65 326 aa13.82□□□□□ -0.2
SIN3A-208ENST00000567289 SFPQP23246 707 aaKnown RBP eCLIP13.82□□□□□ -0.22e-7■■■■□ 20.4
SIN3A-208ENST00000567289 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
SIN3A-208ENST00000567289 ABCC11Q96J66 1382 aa13.82□□□□□ -0.2
SIN3A-208ENST00000567289 NOS1P29475 1434 aa13.82□□□□□ -0.2
SIN3A-208ENST00000567289 FLIIQ13045 1269 aa13.82□□□□□ -0.2
SIN3A-208ENST00000567289 DCTPP1Q9H773 170 aa13.82□□□□□ -0.2
SIN3A-208ENST00000567289 AKAP17AQ02040 695 aaKnown RBP13.81□□□□□ -0.2
SIN3A-208ENST00000567289 ABTB2Q8N961 1025 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
SIN3A-208ENST00000567289 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
SIN3A-208ENST00000567289 RIOK3O14730 519 aaKnown RBP13.81□□□□□ -0.2
SIN3A-208ENST00000567289 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 KIF1BPQ96EK5 621 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 TRIM35Q9UPQ4 493 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 EID1Q9Y6B2 187 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 CEP135Q66GS9 1140 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 TMCO3Q6UWJ1 677 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
SIN3A-208ENST00000567289 ADGRL2O95490 1459 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 ARHGEF12Q9NZN5 1544 aa13.81□□□□□ -0.2
SIN3A-208ENST00000567289 ZNF445P59923 1031 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 TTC5Q8N0Z6 440 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 ZSCAN31Q96LW9 406 aaPredicted RBP13.8□□□□□ -0.2
SIN3A-208ENST00000567289 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 IDI1Q13907 227 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 HS1BP3Q53T59 392 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 CEP85Q6P2H3 762 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 SLC26A8Q96RN1 970 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 FAM193AP78312 1265 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 SCAND2PQ9GZW5 306 aaPredicted RBP13.8□□□□□ -0.2
SIN3A-208ENST00000567289 CFAP45Q9UL16 551 aa13.8□□□□□ -0.2
SIN3A-208ENST00000567289 RRP12Q5JTH9 1297 aaKnown RBP13.8□□□□□ -0.2
SIN3A-208ENST00000567289 NUDT16Q96DE0 195 aaKnown RBP13.8□□□□□ -0.2
SIN3A-208ENST00000567289 POLR1AO95602 1720 aaPredicted RBP13.79□□□□□ -0.2
SIN3A-208ENST00000567289 IPO7O95373 1038 aaKnown RBP13.79□□□□□ -0.2
SIN3A-208ENST00000567289 SKILP12757 684 aa13.79□□□□□ -0.2
SIN3A-208ENST00000567289 GSPT1P15170 499 aaKnown RBP13.79□□□□□ -0.2
SIN3A-208ENST00000567289 AXDND1Q5T1B0 1012 aaPredicted RBP13.79□□□□□ -0.2
SIN3A-208ENST00000567289 COL17A1Q9UMD9 1497 aaPredicted RBP13.79□□□□□ -0.2
SIN3A-208ENST00000567289 GLRX3O76003 335 aaKnown RBP13.79□□□□□ -0.2
SIN3A-208ENST00000567289 CLSTN1O94985 981 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms