RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 LOC102724428A0A0B4J2F2 783 aa15.71■□□□□ 0.11
SPG7-216ENST00000567138 KIF3CO14782 793 aa15.71■□□□□ 0.11
SPG7-216ENST00000567138 SIK1P57059 783 aa15.71■□□□□ 0.11
SPG7-216ENST00000567138 TMF1P82094 1093 aa15.71■□□□□ 0.11
SPG7-216ENST00000567138 CCER1Q8TC90 406 aaPredicted RBP15.71■□□□□ 0.11
SPG7-216ENST00000567138 C4AP0C0L4 1744 aa15.7■□□□□ 0.1
SPG7-216ENST00000567138 GNPATO15228 680 aa15.7■□□□□ 0.1
SPG7-216ENST00000567138 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
SPG7-216ENST00000567138 ITPK1Q13572 414 aa15.69■□□□□ 0.1
SPG7-216ENST00000567138 ARFGEF1Q9Y6D6 1849 aa15.68■□□□□ 0.1
SPG7-216ENST00000567138 WDR90Q96KV7 1748 aa15.68■□□□□ 0.1
SPG7-216ENST00000567138 PPM1GO15355 546 aaPredicted RBP15.68■□□□□ 0.1
SPG7-216ENST00000567138 NKX1-1Q15270 411 aaPredicted RBP15.68■□□□□ 0.1
SPG7-216ENST00000567138 TMOD3Q9NYL9 352 aa15.68■□□□□ 0.1
SPG7-216ENST00000567138 ASAP1Q9ULH1 1129 aa15.68■□□□□ 0.1
SPG7-216ENST00000567138 SPG7Q9UQ90 795 aa15.68■□□□□ 0.1
SPG7-216ENST00000567138 ZNF831Q5JPB2 1677 aa15.68■□□□□ 0.1
SPG7-216ENST00000567138 MMP10P09238 476 aa15.67■□□□□ 0.1
SPG7-216ENST00000567138 MYH14Q7Z406 1995 aaKnown RBP15.67■□□□□ 0.1
SPG7-216ENST00000567138 ATP6V1AP38606 617 aa15.66■□□□□ 0.1
SPG7-216ENST00000567138 C10orf71Q711Q0 1435 aa15.66■□□□□ 0.1
SPG7-216ENST00000567138 CARD14Q9BXL6 1004 aa15.65■□□□□ 0.1
SPG7-216ENST00000567138 KDRP35968 1356 aa15.65■□□□□ 0.1
SPG7-216ENST00000567138 EYA1Q99502 592 aa15.64■□□□□ 0.09
SPG7-216ENST00000567138 BCS1LQ9Y276 419 aa15.64■□□□□ 0.09
SPG7-216ENST00000567138 CLSPNQ9HAW4 1339 aa15.64■□□□□ 0.09
SPG7-216ENST00000567138 PHKG2P15735 406 aa15.63■□□□□ 0.09
SPG7-216ENST00000567138 ATG3Q9NT62 314 aa15.63■□□□□ 0.09
SPG7-216ENST00000567138 A0A0G2JLW4 131 aa15.62■□□□□ 0.09
SPG7-216ENST00000567138 IFNL2Q8IZJ0 200 aa15.62■□□□□ 0.09
SPG7-216ENST00000567138 APLP1P51693 650 aa15.62■□□□□ 0.09
SPG7-216ENST00000567138 WASHC2AQ641Q2 1341 aa15.61■□□□□ 0.09
SPG7-216ENST00000567138 SBF1O95248 1867 aa15.61■□□□□ 0.09
SPG7-216ENST00000567138 CDCA8Q53HL2 280 aa15.61■□□□□ 0.09
SPG7-216ENST00000567138 NMRK2Q9NPI5 230 aa15.61■□□□□ 0.09
SPG7-216ENST00000567138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.09
SPG7-216ENST00000567138 RTCBQ9Y3I0 505 aaKnown RBP15.61■□□□□ 0.09
SPG7-216ENST00000567138 TJP1Q07157 1748 aa15.6■□□□□ 0.09
SPG7-216ENST00000567138 DPEP1P16444 411 aa15.6■□□□□ 0.09
SPG7-216ENST00000567138 TGFB2P61812 414 aa15.6■□□□□ 0.09
SPG7-216ENST00000567138 ARHGAP27Q6ZUM4 889 aa15.6■□□□□ 0.09
SPG7-216ENST00000567138 SLC4A9Q96Q91 983 aa15.6■□□□□ 0.09
SPG7-216ENST00000567138 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
SPG7-216ENST00000567138 VIRMAQ69YN4 1812 aaKnown RBP15.59■□□□□ 0.09
SPG7-216ENST00000567138 TOMM70O94826 608 aa15.59■□□□□ 0.09
SPG7-216ENST00000567138 TRAPPC3LQ5T215 181 aa15.59■□□□□ 0.09
SPG7-216ENST00000567138 CCDC87Q9NVE4 849 aa15.59■□□□□ 0.09
SPG7-216ENST00000567138 TNRC6CQ9HCJ0 1690 aaKnown RBP15.58■□□□□ 0.09
SPG7-216ENST00000567138 FCHSD2O94868 740 aa15.58■□□□□ 0.08
SPG7-216ENST00000567138 EIF4A2Q14240 407 aaKnown RBP15.58■□□□□ 0.08
SPG7-216ENST00000567138 NLGN1Q8N2Q7 840 aa15.58■□□□□ 0.08
SPG7-216ENST00000567138 ARHGEF1Q92888 912 aaKnown RBP15.58■□□□□ 0.08
SPG7-216ENST00000567138 POLKQ9UBT6 870 aa15.58■□□□□ 0.08
SPG7-216ENST00000567138 GYS1P13807 737 aa15.57■□□□□ 0.08
SPG7-216ENST00000567138 KDM6AO15550 1401 aaPredicted RBP15.56■□□□□ 0.08
SPG7-216ENST00000567138 CNTNAP4Q9C0A0 1308 aa15.56■□□□□ 0.08
SPG7-216ENST00000567138 TNNT2P45379 298 aaPredicted RBP15.56■□□□□ 0.08
SPG7-216ENST00000567138 DNAJC5GQ8N7S2 189 aa15.56■□□□□ 0.08
SPG7-216ENST00000567138 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
SPG7-216ENST00000567138 KCPQ6ZWJ8 1503 aa15.56■□□□□ 0.08
SPG7-216ENST00000567138 SCN11AQ9UI33 1791 aa15.56■□□□□ 0.08
SPG7-216ENST00000567138 CCDC88AQ3V6T2 1871 aa15.56■□□□□ 0.08
SPG7-216ENST00000567138 AFDNP55196 1824 aaKnown RBP15.55■□□□□ 0.08
SPG7-216ENST00000567138 RFC4P35249 363 aa15.55■□□□□ 0.08
SPG7-216ENST00000567138 C9orf131Q5VYM1 1079 aa15.55■□□□□ 0.08
SPG7-216ENST00000567138 ADAMTS7Q9UKP4 1686 aa15.55■□□□□ 0.08
SPG7-216ENST00000567138 PLEKHG2Q9H7P9 1386 aa15.55■□□□□ 0.08
SPG7-216ENST00000567138 RPS6KA4O75676 772 aa15.54■□□□□ 0.08
SPG7-216ENST00000567138 HTRA3P83110 453 aa15.54■□□□□ 0.08
SPG7-216ENST00000567138 RC3H1Q5TC82 1133 aaKnown RBP15.54■□□□□ 0.08
SPG7-216ENST00000567138 ERVV-2B6SEH9 535 aa15.53■□□□□ 0.08
SPG7-216ENST00000567138 KCNA3P22001 575 aa15.53■□□□□ 0.08
SPG7-216ENST00000567138 TIAM2Q8IVF5 1701 aa15.52■□□□□ 0.08
SPG7-216ENST00000567138 ZNF530Q6P9A1 599 aaPredicted RBP15.52■□□□□ 0.08
SPG7-216ENST00000567138 C16orf71Q8IYS4 520 aaPredicted RBP15.52■□□□□ 0.08
SPG7-216ENST00000567138 RBM46Q8TBY0 533 aaKnown RBP15.52■□□□□ 0.08
SPG7-216ENST00000567138 POLR3GLQ9BT43 218 aa15.52■□□□□ 0.08
SPG7-216ENST00000567138 SRP68Q9UHB9 627 aaKnown RBP15.52■□□□□ 0.08
SPG7-216ENST00000567138 DLEC1Q9Y238 1755 aa15.52■□□□□ 0.07
SPG7-216ENST00000567138 HSP90AB1P08238 724 aaKnown RBP15.51■□□□□ 0.07
SPG7-216ENST00000567138 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
SPG7-216ENST00000567138 PTCD1O75127 700 aaKnown RBP15.5■□□□□ 0.07
SPG7-216ENST00000567138 CRKLP46109 303 aaKnown RBP15.5■□□□□ 0.07
SPG7-216ENST00000567138 CABP4P57796 275 aa15.5■□□□□ 0.07
SPG7-216ENST00000567138 DDR1Q08345 913 aa15.5■□□□□ 0.07
SPG7-216ENST00000567138 RNF181Q9P0P0 153 aa15.5■□□□□ 0.07
SPG7-216ENST00000567138 PIM2Q9P1W9 311 aa15.5■□□□□ 0.07
SPG7-216ENST00000567138 TIMELESSQ9UNS1 1208 aa15.5■□□□□ 0.07
SPG7-216ENST00000567138 FKBP8Q14318 412 aa15.49■□□□□ 0.07
SPG7-216ENST00000567138 PLEKHO1Q53GL0 409 aaPredicted RBP15.49■□□□□ 0.07
SPG7-216ENST00000567138 USP42Q9H9J4 1324 aaKnown RBP15.49■□□□□ 0.07
SPG7-216ENST00000567138 CHRNA5P30532 468 aa15.49■□□□□ 0.07
SPG7-216ENST00000567138 DALRD3Q5D0E6 543 aaKnown RBP15.49■□□□□ 0.07
SPG7-216ENST00000567138 KLRG1Q96E93 195 aa15.49■□□□□ 0.07
SPG7-216ENST00000567138 KDM2BQ8NHM5 1336 aa15.48■□□□□ 0.07
SPG7-216ENST00000567138 AEBP1Q8IUX7 1158 aa15.48■□□□□ 0.07
SPG7-216ENST00000567138 NRXN2Q9P2S2 1712 aa15.48■□□□□ 0.07
SPG7-216ENST00000567138 FSTL1Q12841 308 aa15.47■□□□□ 0.07
SPG7-216ENST00000567138 RRAGCQ9HB90 399 aa15.47■□□□□ 0.07
SPG7-216ENST00000567138 MTHFSP49914 203 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms