RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 CABP4P57796 275 aa26.74■■□□□ 1.87
RNF40-210ENST00000566811 NCBP3Q53F19 620 aaKnown RBP26.74■■□□□ 1.87
RNF40-210ENST00000566811 TMPOP42166 694 aaKnown RBP26.73■■□□□ 1.87
RNF40-210ENST00000566811 CCDC146Q8IYE0 955 aa26.73■■□□□ 1.87
RNF40-210ENST00000566811 MIER1Q8N108 512 aa26.73■■□□□ 1.87
RNF40-210ENST00000566811 SLC52A2Q9HAB3 445 aa26.73■■□□□ 1.87
RNF40-210ENST00000566811 SMARCC1Q92922 1105 aaPredicted RBP26.72■■□□□ 1.87
RNF40-210ENST00000566811 CICQ96RK0 1608 aaPredicted RBP26.72■■□□□ 1.87
RNF40-210ENST00000566811 TEFQ10587 303 aa26.71■■□□□ 1.87
RNF40-210ENST00000566811 NGEFQ8N5V2 710 aa26.71■■□□□ 1.87
RNF40-210ENST00000566811 UBR2Q8IWV8 1755 aa26.71■■□□□ 1.87
RNF40-210ENST00000566811 NUP188Q5SRE5 1749 aa26.7■■□□□ 1.86
RNF40-210ENST00000566811 RIPK4P57078 832 aa26.69■■□□□ 1.86
RNF40-210ENST00000566811 FAM9BQ8IZU0 186 aa26.69■■□□□ 1.86
RNF40-210ENST00000566811 IL17REQ8NFR9 667 aa26.69■■□□□ 1.86
RNF40-210ENST00000566811 PIGBQ92521 554 aa26.69■■□□□ 1.86
RNF40-210ENST00000566811 LGR6Q9HBX8 967 aa26.68■■□□□ 1.86
RNF40-210ENST00000566811 PALLDQ8WX93 1383 aa26.67■■□□□ 1.86
RNF40-210ENST00000566811 KDM3BQ7LBC6 1761 aa26.66■■□□□ 1.86
RNF40-210ENST00000566811 SLC27A3Q5K4L6 730 aa26.66■■□□□ 1.86
RNF40-210ENST00000566811 PTF1AQ7RTS3 328 aa26.66■■□□□ 1.86
RNF40-210ENST00000566811 NFATC2IPQ8NCF5 419 aa26.66■■□□□ 1.86
RNF40-210ENST00000566811 APAF1O14727 1248 aa26.65■■□□□ 1.86
RNF40-210ENST00000566811 C5P01031 1676 aa26.65■■□□□ 1.86
RNF40-210ENST00000566811 TAF1LQ8IZX4 1826 aa26.65■■□□□ 1.86
RNF40-210ENST00000566811 NBPF14Q5TI25 921 aa26.64■■□□□ 1.86
RNF40-210ENST00000566811 MCM10Q7L590 875 aa26.64■■□□□ 1.86
RNF40-210ENST00000566811 CALD1Q05682 793 aaKnown RBP26.63■■□□□ 1.85
RNF40-210ENST00000566811 CCDC27Q2M243 656 aa26.63■■□□□ 1.85
RNF40-210ENST00000566811 BABAM1Q9NWV8 329 aa26.61■■□□□ 1.85
RNF40-210ENST00000566811 ATG3Q9NT62 314 aa26.6■■□□□ 1.85
RNF40-210ENST00000566811 RRP7AQ9Y3A4 280 aaKnown RBP26.6■■□□□ 1.85
RNF40-210ENST00000566811 KCPQ6ZWJ8 1503 aa26.6■■□□□ 1.85
RNF40-210ENST00000566811 COL5A3P25940 1745 aaPredicted RBP26.59■■□□□ 1.85
RNF40-210ENST00000566811 NEUROD2Q15784 382 aa26.59■■□□□ 1.85
RNF40-210ENST00000566811 TXNRD1Q16881 649 aa26.59■■□□□ 1.85
RNF40-210ENST00000566811 TTC5Q8N0Z6 440 aa26.59■■□□□ 1.85
RNF40-210ENST00000566811 TRIM35Q9UPQ4 493 aa26.59■■□□□ 1.85
RNF40-210ENST00000566811 DCTN1Q14203 1278 aa26.58■■□□□ 1.85
RNF40-210ENST00000566811 TAF7Q15545 349 aaPredicted RBP26.58■■□□□ 1.85
RNF40-210ENST00000566811 ASAP1Q9ULH1 1129 aa26.58■■□□□ 1.85
RNF40-210ENST00000566811 QSER1Q2KHR3 1735 aa26.57■■□□□ 1.84
RNF40-210ENST00000566811 BTBD11A6QL63 1104 aa26.57■■□□□ 1.84
RNF40-210ENST00000566811 TJP1Q07157 1748 aa26.56■■□□□ 1.84
RNF40-210ENST00000566811 CCNL1Q9UK58 526 aaPredicted RBP26.56■■□□□ 1.84
RNF40-210ENST00000566811 LOC102724428A0A0B4J2F2 783 aa26.55■■□□□ 1.84
RNF40-210ENST00000566811 SIK1P57059 783 aa26.55■■□□□ 1.84
RNF40-210ENST00000566811 ZNF790Q6PG37 636 aa26.55■■□□□ 1.84
RNF40-210ENST00000566811 SPON1Q9HCB6 807 aa26.55■■□□□ 1.84
RNF40-210ENST00000566811 VSIG10Q8N0Z9 540 aa26.54■■□□□ 1.84
RNF40-210ENST00000566811 LAMB4A4D0S4 1761 aa26.53■■□□□ 1.84
RNF40-210ENST00000566811 YY1P25490 414 aa26.53■■□□□ 1.84
RNF40-210ENST00000566811 C4BP0C0L5 1744 aa26.53■■□□□ 1.84
RNF40-210ENST00000566811 IL16Q14005 1332 aa26.51■■□□□ 1.83
RNF40-210ENST00000566811 PROM2Q8N271 834 aa26.51■■□□□ 1.83
RNF40-210ENST00000566811 PPP1R1BQ9UD71 204 aaPredicted RBP26.51■■□□□ 1.83
RNF40-210ENST00000566811 WWC1Q8IX03 1113 aa26.5■■□□□ 1.83
RNF40-210ENST00000566811 FMNL2Q96PY5 1086 aa26.5■■□□□ 1.83
RNF40-210ENST00000566811 THUMPD2Q9BTF0 503 aaKnown RBP26.5■■□□□ 1.83
RNF40-210ENST00000566811 RBM42Q9BTD8 480 aaKnown RBP26.49■■□□□ 1.83
RNF40-210ENST00000566811 ANO8Q9HCE9 1232 aaPredicted RBP26.49■■□□□ 1.83
RNF40-210ENST00000566811 IFT57Q9NWB7 429 aa26.49■■□□□ 1.83
RNF40-210ENST00000566811 ATP6V1AP38606 617 aa26.48■■□□□ 1.83
RNF40-210ENST00000566811 SLC39A6Q13433 755 aa26.48■■□□□ 1.83
RNF40-210ENST00000566811 CFAP44Q96MT7 982 aa26.48■■□□□ 1.83
RNF40-210ENST00000566811 TSPYL4Q9UJ04 414 aa26.48■■□□□ 1.83
RNF40-210ENST00000566811 HEG1Q9ULI3 1381 aa26.47■■□□□ 1.83
RNF40-210ENST00000566811 PTCD1O75127 700 aaKnown RBP26.47■■□□□ 1.83
RNF40-210ENST00000566811 GNAI1P63096 354 aa26.47■■□□□ 1.83
RNF40-210ENST00000566811 WDR63Q8IWG1 891 aa26.47■■□□□ 1.83
RNF40-210ENST00000566811 TEX13AQ9BXU3 409 aaPredicted RBP26.47■■□□□ 1.83
RNF40-210ENST00000566811 LRRC4BQ9NT99 713 aa26.47■■□□□ 1.83
RNF40-210ENST00000566811 TUBGCP6Q96RT7 1819 aa26.46■■□□□ 1.83
RNF40-210ENST00000566811 UBR3Q6ZT12 1888 aa26.45■■□□□ 1.83
RNF40-210ENST00000566811 CHL1O00533 1208 aa26.45■■□□□ 1.82
RNF40-210ENST00000566811 ZNF496Q96IT1 587 aaPredicted RBP26.44■■□□□ 1.82
RNF40-210ENST00000566811 ZNF853P0CG23 659 aa26.43■■□□□ 1.82
RNF40-210ENST00000566811 PDGFDQ9GZP0 370 aaPredicted RBP26.43■■□□□ 1.82
RNF40-210ENST00000566811 STK32BQ9NY57 414 aa26.43■■□□□ 1.82
RNF40-210ENST00000566811 CNTNAP4Q9C0A0 1308 aa26.42■■□□□ 1.82
RNF40-210ENST00000566811 SLC4A9Q96Q91 983 aa26.41■■□□□ 1.82
RNF40-210ENST00000566811 ZNF521Q96K83 1311 aa26.4■■□□□ 1.82
RNF40-210ENST00000566811 STARD3NLO95772 234 aa26.4■■□□□ 1.82
RNF40-210ENST00000566811 SNRPA1P09661 255 aaKnown RBP26.4■■□□□ 1.82
RNF40-210ENST00000566811 ITPK1Q13572 414 aa26.4■■□□□ 1.82
RNF40-210ENST00000566811 RC3H1Q5TC82 1133 aaKnown RBP26.4■■□□□ 1.82
RNF40-210ENST00000566811 CASZ1Q86V15 1759 aa26.4■■□□□ 1.82
RNF40-210ENST00000566811 MYH14Q7Z406 1995 aaKnown RBP26.4■■□□□ 1.82
RNF40-210ENST00000566811 EIF4A1P60842 406 aaKnown RBP26.39■■□□□ 1.82
RNF40-210ENST00000566811 SLC15A2Q16348 729 aa26.39■■□□□ 1.82
RNF40-210ENST00000566811 AKT1S1Q96B36 256 aa26.39■■□□□ 1.82
RNF40-210ENST00000566811 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
RNF40-210ENST00000566811 SOS1Q07889 1333 aaPredicted RBP26.39■■□□□ 1.81
RNF40-210ENST00000566811 AK7Q96M32 723 aa26.38■■□□□ 1.81
RNF40-210ENST00000566811 DCAF8L1A6NGE4 600 aa26.37■■□□□ 1.81
RNF40-210ENST00000566811 HOXB7P09629 217 aa26.37■■□□□ 1.81
RNF40-210ENST00000566811 LINC00116Q8NCU8 138 aa26.37■■□□□ 1.81
RNF40-210ENST00000566811 MIS18AQ9NYP9 233 aa26.37■■□□□ 1.81
RNF40-210ENST00000566811 KCNQ3O43525 872 aa26.36■■□□□ 1.81
RNF40-210ENST00000566811 FLAD1Q8NFF5 587 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms