RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 FLIIQ13045 1269 aa11.47□□□□□ -0.57
BBS4-210ENST00000566400 SPRYD3Q8NCJ5 442 aa11.47□□□□□ -0.57
BBS4-210ENST00000566400 CWC22Q9HCG8 908 aaKnown RBP11.47□□□□□ -0.57
BBS4-210ENST00000566400 PHF8Q9UPP1 1060 aa11.47□□□□□ -0.57
BBS4-210ENST00000566400 FAM208AQ9UK61 1670 aaKnown RBP11.47□□□□□ -0.57
BBS4-210ENST00000566400 N4BP2Q86UW6 1770 aaPredicted RBP11.47□□□□□ -0.57
BBS4-210ENST00000566400 FKBP5Q13451 457 aaPredicted RBP11.47□□□□□ -0.57
BBS4-210ENST00000566400 SLC4A10Q6U841 1118 aa11.47□□□□□ -0.57
BBS4-210ENST00000566400 NWD1Q149M9 1564 aa11.46□□□□□ -0.57
BBS4-210ENST00000566400 PHRF1Q9P1Y6 1649 aaKnown RBP11.46□□□□□ -0.57
BBS4-210ENST00000566400 FOXO3O43524 673 aa11.46□□□□□ -0.57
BBS4-210ENST00000566400 NUCB2P80303 420 aa11.46□□□□□ -0.57
BBS4-210ENST00000566400 CLEC17AQ6ZS10 378 aa11.46□□□□□ -0.57
BBS4-210ENST00000566400 IP6K1Q92551 441 aa11.46□□□□□ -0.57
BBS4-210ENST00000566400 USP26Q9BXU7 913 aa11.46□□□□□ -0.57
BBS4-210ENST00000566400 AOX1Q06278 1338 aa11.46□□□□□ -0.58
BBS4-210ENST00000566400 MARF1Q9Y4F3 1742 aaKnown RBP11.45□□□□□ -0.58
BBS4-210ENST00000566400 ERC2O15083 957 aa11.45□□□□□ -0.58
BBS4-210ENST00000566400 SDSP20132 328 aa11.45□□□□□ -0.58
BBS4-210ENST00000566400 MCM2P49736 904 aa11.45□□□□□ -0.58
BBS4-210ENST00000566400 LRRCC1Q9C099 1032 aa11.45□□□□□ -0.58
BBS4-210ENST00000566400 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
BBS4-210ENST00000566400 CHD2O14647 1828 aaKnown RBP11.45□□□□□ -0.58
BBS4-210ENST00000566400 MCCP23508 829 aa11.45□□□□□ -0.58
BBS4-210ENST00000566400 ATP8B2P98198 1209 aa11.45□□□□□ -0.58
BBS4-210ENST00000566400 MRE11P49959 708 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 MIS18AQ9NYP9 233 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 CEMIPQ8WUJ3 1361 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 OVOS2A0A0G2JMS6 1433 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 NCAPD2Q15021 1401 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 FSD2A1L4K1 749 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 RAB11FIP3O75154 756 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 PDE1AP54750 535 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 AMOTQ4VCS5 1084 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 FAM43AQ8N2R8 423 aa11.44□□□□□ -0.58
BBS4-210ENST00000566400 TNPO1Q92973 898 aaKnown RBP11.44□□□□□ -0.58
BBS4-210ENST00000566400 G2E3Q7L622 706 aa11.43□□□□□ -0.58
BBS4-210ENST00000566400 BRPF3Q9ULD4 1205 aa11.43□□□□□ -0.58
BBS4-210ENST00000566400 IBTKQ9P2D0 1353 aaPredicted RBP11.42□□□□□ -0.58
BBS4-210ENST00000566400 UBTFL1P0CB47 393 aaPredicted RBP11.42□□□□□ -0.58
BBS4-210ENST00000566400 HSP90AB4PQ58FF6 505 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 IL17REQ8NFR9 667 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 MED1Q15648 1581 aaPredicted RBP11.42□□□□□ -0.58
BBS4-210ENST00000566400 NFAT5O94916 1531 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 F6X3S4 739 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 ANAPC15P60006 121 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 PSME1Q06323 249 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 PLEKHO1Q53GL0 409 aaPredicted RBP11.42□□□□□ -0.58
BBS4-210ENST00000566400 C14orf37Q86TY3 774 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 C16orf71Q8IYS4 520 aaPredicted RBP11.42□□□□□ -0.58
BBS4-210ENST00000566400 STAP2Q9UGK3 403 aa11.42□□□□□ -0.58
BBS4-210ENST00000566400 LTN1O94822 1766 aa11.41□□□□□ -0.58
BBS4-210ENST00000566400 MX1P20591 662 aa11.41□□□□□ -0.58
BBS4-210ENST00000566400 AKAP4Q5JQC9 854 aa11.41□□□□□ -0.58
BBS4-210ENST00000566400 SALL3Q9BXA9 1300 aa11.4□□□□□ -0.58
BBS4-210ENST00000566400 SMARCA5O60264 1052 aaPredicted RBP11.39□□□□□ -0.59
BBS4-210ENST00000566400 TEFQ10587 303 aa11.39□□□□□ -0.59
BBS4-210ENST00000566400 SSH3Q8TE77 659 aa11.39□□□□□ -0.59
BBS4-210ENST00000566400 LMO7Q8WWI1 1683 aa11.39□□□□□ -0.59
BBS4-210ENST00000566400 APBB1O00213 710 aa11.39□□□□□ -0.59
BBS4-210ENST00000566400 LTV1Q96GA3 475 aaPredicted RBP11.39□□□□□ -0.59
BBS4-210ENST00000566400 PLEKHG2Q9H7P9 1386 aa11.38□□□□□ -0.59
BBS4-210ENST00000566400 ZNF335Q9H4Z2 1342 aaPredicted RBP11.38□□□□□ -0.59
BBS4-210ENST00000566400 EIF4A1P60842 406 aaKnown RBP11.38□□□□□ -0.59
BBS4-210ENST00000566400 C1orf141Q5JVX7 400 aa11.38□□□□□ -0.59
BBS4-210ENST00000566400 NUTM2GQ5VZR2 741 aa11.38□□□□□ -0.59
BBS4-210ENST00000566400 OTUD7AQ8TE49 926 aaPredicted RBP11.38□□□□□ -0.59
BBS4-210ENST00000566400 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
BBS4-210ENST00000566400 EXOC6BQ9Y2D4 811 aa11.38□□□□□ -0.59
BBS4-210ENST00000566400 SLIT3O75094 1523 aa11.38□□□□□ -0.59
BBS4-210ENST00000566400 KDM3BQ7LBC6 1761 aa11.38□□□□□ -0.59
BBS4-210ENST00000566400 CD2BP2O95400 341 aaKnown RBP11.37□□□□□ -0.59
BBS4-210ENST00000566400 ESCO1Q5FWF5 840 aa11.37□□□□□ -0.59
BBS4-210ENST00000566400 KIF1BPQ96EK5 621 aa11.37□□□□□ -0.59
BBS4-210ENST00000566400 ESYT1Q9BSJ8 1104 aa11.37□□□□□ -0.59
BBS4-210ENST00000566400 RBM42Q9BTD8 480 aaKnown RBP11.37□□□□□ -0.59
BBS4-210ENST00000566400 USP44Q9H0E7 712 aa11.37□□□□□ -0.59
BBS4-210ENST00000566400 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
BBS4-210ENST00000566400 POLA2Q14181 598 aa11.37□□□□□ -0.59
BBS4-210ENST00000566400 KLHL40Q2TBA0 621 aa11.37□□□□□ -0.59
BBS4-210ENST00000566400 DBF4Q9UBU7 674 aaPredicted RBP11.37□□□□□ -0.59
BBS4-210ENST00000566400 NBPF6Q5VWK0 638 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 DNAAF4Q8WXU2 420 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 NBPF4Q96M43 638 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 NPHP4O75161 1426 aaPredicted RBP11.36□□□□□ -0.59
BBS4-210ENST00000566400 MST1RQ04912 1400 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 PNMA6EA0A0J9YXQ4 647 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 ALDH1L1O75891 902 aa11.36□□□□□ -0.59
BBS4-210ENST00000566400 BAG4O95429 457 aaKnown RBP11.36□□□□□ -0.59
BBS4-210ENST00000566400 XRCC6P12956 609 aaKnown RBP eCLIP11.36□□□□□ -0.59
BBS4-210ENST00000566400 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
BBS4-210ENST00000566400 INTS4Q96HW7 963 aaKnown RBP11.36□□□□□ -0.59
BBS4-210ENST00000566400 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
BBS4-210ENST00000566400 CYP2E1P05181 493 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms