RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ATP2B4P23634 1241 aa7.19□□□□□ -1.26
LINC00561-201ENST00000565815 RNF20Q5VTR2 975 aa7.19□□□□□ -1.26
LINC00561-201ENST00000565815 ZNF428Q96B54 188 aa7.19□□□□□ -1.26
LINC00561-201ENST00000565815 C21orf2O43822 256 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 ZIC2O95409 532 aaPredicted RBP7.18□□□□□ -1.26
LINC00561-201ENST00000565815 SEC13P55735 322 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 RELBQ01201 579 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 KLRG1Q96E93 195 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 RIMBP3CA6NJZ7 1639 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 RIMBP3BA6NNM3 1639 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 RIMBP3Q9UFD9 1639 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 BRD1O95696 1058 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 IL2RAP01589 272 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 ZNF211Q13398 564 aaPredicted RBP7.18□□□□□ -1.26
LINC00561-201ENST00000565815 IFFO2Q5TF58 517 aa7.18□□□□□ -1.26
LINC00561-201ENST00000565815 TIMP2P16035 220 aa7.17□□□□□ -1.26
LINC00561-201ENST00000565815 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
LINC00561-201ENST00000565815 WDR4P57081 412 aaKnown RBP7.17□□□□□ -1.26
LINC00561-201ENST00000565815 MCCD1P59942 119 aaPredicted RBP7.17□□□□□ -1.26
LINC00561-201ENST00000565815 NAA30Q147X3 362 aaPredicted RBP7.17□□□□□ -1.26
LINC00561-201ENST00000565815 TOR4AQ9NXH8 423 aa7.17□□□□□ -1.26
LINC00561-201ENST00000565815 PARP3Q9Y6F1 533 aa7.17□□□□□ -1.26
LINC00561-201ENST00000565815 WASF2Q9Y6W5 498 aa7.17□□□□□ -1.26
LINC00561-201ENST00000565815 TTC24A2A3L6 582 aaPredicted RBP7.17□□□□□ -1.26
LINC00561-201ENST00000565815 BMP1P13497 986 aa7.17□□□□□ -1.26
LINC00561-201ENST00000565815 CHMP7Q8WUX9 453 aaPredicted RBP7.17□□□□□ -1.26
LINC00561-201ENST00000565815 CDV3Q9UKY7 258 aaKnown RBP7.16□□□□□ -1.26
LINC00561-201ENST00000565815 MYCP01106 439 aaPredicted RBP7.16□□□□□ -1.26
LINC00561-201ENST00000565815 EPHA4P54764 986 aa7.16□□□□□ -1.26
LINC00561-201ENST00000565815 TRIM50Q86XT4 487 aa7.16□□□□□ -1.26
LINC00561-201ENST00000565815 FANCD2Q9BXW9 1451 aa7.15□□□□□ -1.26
LINC00561-201ENST00000565815 NR5A1Q13285 461 aa7.15□□□□□ -1.26
LINC00561-201ENST00000565815 CLP1Q92989 425 aaKnown RBP7.15□□□□□ -1.26
LINC00561-201ENST00000565815 A0A1W2PRU2 124 aa7.15□□□□□ -1.26
LINC00561-201ENST00000565815 INHAP05111 366 aa7.14□□□□□ -1.27
LINC00561-201ENST00000565815 MYT1Q01538 1121 aa7.14□□□□□ -1.27
LINC00561-201ENST00000565815 ZNF592Q92610 1267 aa7.14□□□□□ -1.27
LINC00561-201ENST00000565815 FAM26DQ5JW98 314 aa7.14□□□□□ -1.27
LINC00561-201ENST00000565815 FOXD4L5Q5VV16 416 aaPredicted RBP7.14□□□□□ -1.27
LINC00561-201ENST00000565815 SNIP1Q8TAD8 396 aaKnown RBP7.14□□□□□ -1.27
LINC00561-201ENST00000565815 FOXD4L4Q8WXT5 416 aaPredicted RBP7.14□□□□□ -1.27
LINC00561-201ENST00000565815 CNKSR1Q969H4 720 aa7.14□□□□□ -1.27
LINC00561-201ENST00000565815 SAP130Q9H0E3 1048 aa7.14□□□□□ -1.27
LINC00561-201ENST00000565815 SCG3Q8WXD2 468 aaKnown RBP7.14□□□□□ -1.27
LINC00561-201ENST00000565815 CXXC1Q9P0U4 656 aaPredicted RBP7.14□□□□□ -1.27
LINC00561-201ENST00000565815 ARHGEF11O15085 1522 aa7.14□□□□□ -1.27
LINC00561-201ENST00000565815 IFT140Q96RY7 1462 aa7.13□□□□□ -1.27
LINC00561-201ENST00000565815 ABL1P00519 1130 aa7.13□□□□□ -1.27
LINC00561-201ENST00000565815 TXNDC2Q86VQ3 553 aa7.13□□□□□ -1.27
LINC00561-201ENST00000565815 CYP4X1Q8N118 509 aa7.13□□□□□ -1.27
LINC00561-201ENST00000565815 CFTRP13569 1480 aa7.13□□□□□ -1.27
LINC00561-201ENST00000565815 V9GY48 417 aaPredicted RBP7.13□□□□□ -1.27
LINC00561-201ENST00000565815 RSF1Q96T23 1441 aaPredicted RBP7.13□□□□□ -1.27
LINC00561-201ENST00000565815 ABCC8Q09428 1581 aa7.12□□□□□ -1.27
LINC00561-201ENST00000565815 LZTS3O60299 673 aaPredicted RBP7.12□□□□□ -1.27
LINC00561-201ENST00000565815 INSM2Q96T92 566 aaPredicted RBP7.12□□□□□ -1.27
LINC00561-201ENST00000565815 MEN1O00255 615 aa7.12□□□□□ -1.27
LINC00561-201ENST00000565815 WEE1P30291 646 aa7.12□□□□□ -1.27
LINC00561-201ENST00000565815 SWI5Q1ZZU3 235 aa7.12□□□□□ -1.27
LINC00561-201ENST00000565815 NOM1Q5C9Z4 860 aaKnown RBP7.12□□□□□ -1.27
LINC00561-201ENST00000565815 MPNDQ8N594 471 aa7.12□□□□□ -1.27
LINC00561-201ENST00000565815 MTMR7Q9Y216 660 aa7.12□□□□□ -1.27
LINC00561-201ENST00000565815 DHX9Q08211 1270 aaKnown RBP7.11□□□□□ -1.27
LINC00561-201ENST00000565815 EMILIN1Q9Y6C2 1016 aa7.11□□□□□ -1.27
LINC00561-201ENST00000565815 MROH2BQ7Z745 1585 aa7.11□□□□□ -1.27
LINC00561-201ENST00000565815 ADH1AP07327 375 aa7.11□□□□□ -1.27
LINC00561-201ENST00000565815 Q6ZVU0 165 aa7.1□□□□□ -1.27
LINC00561-201ENST00000565815 SLC9A9Q8IVB4 645 aa7.1□□□□□ -1.27
LINC00561-201ENST00000565815 PDZRN3Q9UPQ7 1066 aa7.1□□□□□ -1.27
LINC00561-201ENST00000565815 DNMT3AQ9Y6K1 912 aaPredicted RBP7.1□□□□□ -1.27
LINC00561-201ENST00000565815 CTSOP43234 321 aaPredicted RBP7.1□□□□□ -1.27
LINC00561-201ENST00000565815 MFAP1P55081 439 aaKnown RBP7.1□□□□□ -1.27
LINC00561-201ENST00000565815 TLR1Q15399 786 aa7.1□□□□□ -1.27
LINC00561-201ENST00000565815 C6orf118Q5T5N4 469 aa7.1□□□□□ -1.27
LINC00561-201ENST00000565815 ZDHHC1Q8WTX9 485 aa7.1□□□□□ -1.27
LINC00561-201ENST00000565815 ESF1Q9H501 851 aaKnown RBP7.1□□□□□ -1.27
LINC00561-201ENST00000565815 IQSEC3Q9UPP2 1182 aaPredicted RBP7.1□□□□□ -1.27
LINC00561-201ENST00000565815 ZNF295-AS1Q8N0V1 137 aa7.09□□□□□ -1.27
LINC00561-201ENST00000565815 HRH3Q9Y5N1 445 aa7.09□□□□□ -1.27
LINC00561-201ENST00000565815 SIRT1Q96EB6 747 aa7.09□□□□□ -1.27
LINC00561-201ENST00000565815 SCHIP1Q9P0W5 487 aaPredicted RBP7.09□□□□□ -1.27
LINC00561-201ENST00000565815 H3BRB1 525 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 KCNA1Q09470 495 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 TMCO4Q5TGY1 634 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 CYP2U1Q7Z449 544 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 GTF3C2Q8WUA4 911 aaPredicted RBP7.08□□□□□ -1.28
LINC00561-201ENST00000565815 TUT1Q9H6E5 874 aaKnown RBP7.08□□□□□ -1.28
LINC00561-201ENST00000565815 RBM19Q9Y4C8 960 aaKnown RBP7.08□□□□□ -1.28
LINC00561-201ENST00000565815 FAM187AA6NFU0 413 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 A6NJY4 79 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 ST8SIA5O15466 376 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 PRDM2Q13029 1718 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 NGLY1Q96IV0 654 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 PGPEP1Q9NXJ5 209 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 DACH1Q9UI36 760 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 LRFN2Q9ULH4 789 aa7.08□□□□□ -1.28
LINC00561-201ENST00000565815 SMTNP53814 917 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 ECM1Q16610 540 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 MEIOBQ8N635 442 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 FHDC1Q9C0D6 1143 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms