RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 ZSCAN10Q96SZ4 725 aaPredicted RBP8.44□□□□□ -1.06
CHD9-210ENST00000564582 FAM196BA6NMK8 535 aa8.43□□□□□ -1.06
CHD9-210ENST00000564582 SUPT5HO00267 1087 aaKnown RBP8.43□□□□□ -1.06
CHD9-210ENST00000564582 KANK4Q5T7N3 995 aaPredicted RBP8.43□□□□□ -1.06
CHD9-210ENST00000564582 SIX5Q8N196 739 aa8.43□□□□□ -1.06
CHD9-210ENST00000564582 ZNF594Q96JF6 807 aaPredicted RBP8.43□□□□□ -1.06
CHD9-210ENST00000564582 SOBPA7XYQ1 873 aa8.42□□□□□ -1.06
CHD9-210ENST00000564582 TMEM229AB2RXF0 380 aa8.42□□□□□ -1.06
CHD9-210ENST00000564582 GNASQ5JWF2 1037 aa8.42□□□□□ -1.06
CHD9-210ENST00000564582 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
CHD9-210ENST00000564582 PRICKLE2Q7Z3G6 844 aa8.42□□□□□ -1.06
CHD9-210ENST00000564582 NBPF15Q8N660 670 aa8.42□□□□□ -1.06
CHD9-210ENST00000564582 GRIP2Q9C0E4 1043 aa8.42□□□□□ -1.06
CHD9-210ENST00000564582 SERTAD1Q9UHV2 236 aa8.42□□□□□ -1.06
CHD9-210ENST00000564582 USP17L15C9J2P7 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L10C9JJH3 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L13C9JLJ4 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L12C9JPN9 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L11C9JVI0 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L21D6R901 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L18D6R9N7 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L22D6RA61 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L17D6RBQ6 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L19D6RCP7 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L20D6RJB6 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 ZBTB7BO15156 539 aaPredicted RBP8.41□□□□□ -1.06
CHD9-210ENST00000564582 STAU1O95793 577 aaKnown RBP8.41□□□□□ -1.06
CHD9-210ENST00000564582 SMTNP53814 917 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 USP17L24Q0WX57 530 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHD9-210ENST00000564582 PBXIP1Q96AQ6 731 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 SLC4A9Q96Q91 983 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 C1orf115Q9H7X2 142 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 ZNF358Q9NW07 568 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 KIAA1024Q9UPX6 916 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 HRH3Q9Y5N1 445 aa8.41□□□□□ -1.06
CHD9-210ENST00000564582 SPATA31C2B4DYI2 1134 aa8.4□□□□□ -1.06
CHD9-210ENST00000564582 M0R2N6 131 aa8.4□□□□□ -1.06
CHD9-210ENST00000564582 SEC13P55735 322 aa8.4□□□□□ -1.06
CHD9-210ENST00000564582 PTK7Q13308 1070 aa8.4□□□□□ -1.06
CHD9-210ENST00000564582 WDR44Q5JSH3 913 aa8.4□□□□□ -1.06
CHD9-210ENST00000564582 TAS1R3Q7RTX0 852 aa8.4□□□□□ -1.06
CHD9-210ENST00000564582 FHDC1Q9C0D6 1143 aaPredicted RBP8.4□□□□□ -1.06
CHD9-210ENST00000564582 CLSPNQ9HAW4 1339 aa8.39□□□□□ -1.07
CHD9-210ENST00000564582 A6NJY4 79 aa8.39□□□□□ -1.07
CHD9-210ENST00000564582 PTSQ03393 145 aa8.39□□□□□ -1.07
CHD9-210ENST00000564582 CRTC2Q53ET0 693 aaPredicted RBP8.39□□□□□ -1.07
CHD9-210ENST00000564582 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
CHD9-210ENST00000564582 NPAS3Q8IXF0 933 aa8.39□□□□□ -1.07
CHD9-210ENST00000564582 RHBDD1Q8TEB9 315 aa8.39□□□□□ -1.07
CHD9-210ENST00000564582 NXF1Q9UBU9 619 aaKnown RBP8.39□□□□□ -1.07
CHD9-210ENST00000564582 ACIN1Q9UKV3 1341 aaKnown RBP8.38□□□□□ -1.07
CHD9-210ENST00000564582 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
CHD9-210ENST00000564582 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
CHD9-210ENST00000564582 MTFR1Q15390 333 aa8.38□□□□□ -1.07
CHD9-210ENST00000564582 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
CHD9-210ENST00000564582 NBPF10Q6P3W6 841 aaKnown RBP8.38□□□□□ -1.07
CHD9-210ENST00000564582 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
CHD9-210ENST00000564582 CDK2AP1O14519 115 aa8.37□□□□□ -1.07
CHD9-210ENST00000564582 RHOQP17081 205 aa8.37□□□□□ -1.07
CHD9-210ENST00000564582 POU4F2Q12837 409 aa8.37□□□□□ -1.07
CHD9-210ENST00000564582 DPYDQ12882 1025 aa8.37□□□□□ -1.07
CHD9-210ENST00000564582 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
CHD9-210ENST00000564582 SLC16A10Q8TF71 515 aa8.37□□□□□ -1.07
CHD9-210ENST00000564582 NIFKQ9BYG3 293 aaKnown RBP8.37□□□□□ -1.07
CHD9-210ENST00000564582 CCDC155Q8N6L0 562 aa8.36□□□□□ -1.07
CHD9-210ENST00000564582 TIMMDC1Q9NPL8 285 aa8.36□□□□□ -1.07
CHD9-210ENST00000564582 SCHIP1Q9P0W5 487 aaPredicted RBP8.36□□□□□ -1.07
CHD9-210ENST00000564582 NOVA2Q9UNW9 492 aaKnown RBP8.36□□□□□ -1.07
CHD9-210ENST00000564582 CHMP3Q9Y3E7 222 aa8.36□□□□□ -1.07
CHD9-210ENST00000564582 SLC35F4A4IF30 521 aa8.35□□□□□ -1.07
CHD9-210ENST00000564582 SFI1A8K8P3 1242 aa8.35□□□□□ -1.07
CHD9-210ENST00000564582 ATG7O95352 703 aa8.35□□□□□ -1.07
CHD9-210ENST00000564582 ELOAQ14241 798 aaKnown RBP8.35□□□□□ -1.07
CHD9-210ENST00000564582 DYRK1BQ9Y463 629 aa8.35□□□□□ -1.07
CHD9-210ENST00000564582 TERTO14746 1132 aaKnown RBP8.34□□□□□ -1.07
CHD9-210ENST00000564582 DKK1O94907 266 aa8.34□□□□□ -1.07
CHD9-210ENST00000564582 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
CHD9-210ENST00000564582 C4orf17Q53FE4 359 aa8.34□□□□□ -1.07
CHD9-210ENST00000564582 TNS4Q8IZW8 715 aa8.34□□□□□ -1.07
CHD9-210ENST00000564582 TSEN2Q8NCE0 465 aaKnown RBP8.34□□□□□ -1.07
CHD9-210ENST00000564582 ARID3AQ99856 593 aa8.34□□□□□ -1.07
CHD9-210ENST00000564582 HINFPQ9BQA5 517 aa8.34□□□□□ -1.07
CHD9-210ENST00000564582 CABP1Q9NZU7 370 aa8.34□□□□□ -1.07
CHD9-210ENST00000564582 A0A1B0GTH6 734 aa8.33□□□□□ -1.08
CHD9-210ENST00000564582 PPFIA3O75145 1194 aa8.33□□□□□ -1.08
CHD9-210ENST00000564582 PHKA2P46019 1235 aa8.33□□□□□ -1.08
CHD9-210ENST00000564582 PLA2G4AP47712 749 aa8.33□□□□□ -1.08
CHD9-210ENST00000564582 NBPF1Q3BBV0 1214 aa8.33□□□□□ -1.08
CHD9-210ENST00000564582 EPHA4P54764 986 aa8.32□□□□□ -1.08
CHD9-210ENST00000564582 FOXK2Q01167 660 aa8.32□□□□□ -1.08
CHD9-210ENST00000564582 SLC9A9Q8IVB4 645 aa8.32□□□□□ -1.08
CHD9-210ENST00000564582 GAS2L2Q8NHY3 880 aa8.32□□□□□ -1.08
CHD9-210ENST00000564582 ZNF775Q96BV0 537 aaPredicted RBP8.32□□□□□ -1.08
CHD9-210ENST00000564582 ARXQ96QS3 562 aa8.32□□□□□ -1.08
CHD9-210ENST00000564582 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
CHD9-210ENST00000564582 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
CHD9-210ENST00000564582 SENP3-EIF4A1A0A087X0R7 540 aa8.31□□□□□ -1.08
CHD9-210ENST00000564582 H3BM21 787 aa8.31□□□□□ -1.08
CHD9-210ENST00000564582 H7C1W4 665 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms