RNA–Protein interactions for RNA: ENST00000564404.5

TRAPPC2L-207, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-207ENST00000564404 AK7Q96M32 723 aa16.37■□□□□ 0.21
TRAPPC2L-207ENST00000564404 COL5A3P25940 1745 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC2L-207ENST00000564404 CABP4P57796 275 aa16.36■□□□□ 0.21
TRAPPC2L-207ENST00000564404 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC2L-207ENST00000564404 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
TRAPPC2L-207ENST00000564404 ATG3Q9NT62 314 aa16.36■□□□□ 0.21
TRAPPC2L-207ENST00000564404 ZNF831Q5JPB2 1677 aa16.36■□□□□ 0.21
TRAPPC2L-207ENST00000564404 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC2L-207ENST00000564404 ATP6V1AP38606 617 aa16.35■□□□□ 0.21
TRAPPC2L-207ENST00000564404 U2SURPO15042 1029 aaKnown RBP16.34■□□□□ 0.21
TRAPPC2L-207ENST00000564404 PHF14O94880 888 aa16.34■□□□□ 0.21
TRAPPC2L-207ENST00000564404 LINC00116Q8NCU8 138 aa16.34■□□□□ 0.21
TRAPPC2L-207ENST00000564404 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
TRAPPC2L-207ENST00000564404 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
TRAPPC2L-207ENST00000564404 CHD4Q14839 1912 aa16.34■□□□□ 0.21
TRAPPC2L-207ENST00000564404 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.21
TRAPPC2L-207ENST00000564404 MSL1Q68DK7 614 aa16.33■□□□□ 0.2
TRAPPC2L-207ENST00000564404 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
TRAPPC2L-207ENST00000564404 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
TRAPPC2L-207ENST00000564404 ITPK1Q13572 414 aa16.32■□□□□ 0.2
TRAPPC2L-207ENST00000564404 AKAP4Q5JQC9 854 aa16.32■□□□□ 0.2
TRAPPC2L-207ENST00000564404 SMIM5Q71RC9 77 aa16.32■□□□□ 0.2
TRAPPC2L-207ENST00000564404 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
TRAPPC2L-207ENST00000564404 ZNF784Q8NCA9 323 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC2L-207ENST00000564404 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
TRAPPC2L-207ENST00000564404 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
TRAPPC2L-207ENST00000564404 TJP1Q07157 1748 aa16.31■□□□□ 0.2
TRAPPC2L-207ENST00000564404 GNPATO15228 680 aa16.3■□□□□ 0.2
TRAPPC2L-207ENST00000564404 ADAMTS7Q9UKP4 1686 aa16.3■□□□□ 0.2
TRAPPC2L-207ENST00000564404 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
TRAPPC2L-207ENST00000564404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.29■□□□□ 0.2
TRAPPC2L-207ENST00000564404 PTCD1O75127 700 aaKnown RBP16.29■□□□□ 0.2
TRAPPC2L-207ENST00000564404 MTHFSDQ2M296 383 aaKnown RBP16.29■□□□□ 0.2
TRAPPC2L-207ENST00000564404 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
TRAPPC2L-207ENST00000564404 SSFA2P28290 1259 aa16.28■□□□□ 0.2
TRAPPC2L-207ENST00000564404 SLC4A9Q96Q91 983 aa16.28■□□□□ 0.2
TRAPPC2L-207ENST00000564404 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
TRAPPC2L-207ENST00000564404 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
TRAPPC2L-207ENST00000564404 MRC1P22897 1456 aa16.27■□□□□ 0.19
TRAPPC2L-207ENST00000564404 CICQ96RK0 1608 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC2L-207ENST00000564404 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC2L-207ENST00000564404 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
TRAPPC2L-207ENST00000564404 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
TRAPPC2L-207ENST00000564404 SLC52A2Q9HAB3 445 aa16.26■□□□□ 0.19
TRAPPC2L-207ENST00000564404 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
TRAPPC2L-207ENST00000564404 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
TRAPPC2L-207ENST00000564404 RTCBQ9Y3I0 505 aaKnown RBP16.25■□□□□ 0.19
TRAPPC2L-207ENST00000564404 IFFO2Q5TF58 517 aa16.24■□□□□ 0.19
TRAPPC2L-207ENST00000564404 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
TRAPPC2L-207ENST00000564404 NLGN2Q8NFZ4 835 aa16.24■□□□□ 0.19
TRAPPC2L-207ENST00000564404 DLG5Q8TDM6 1919 aa16.23■□□□□ 0.19
TRAPPC2L-207ENST00000564404 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
TRAPPC2L-207ENST00000564404 PRKAR2BP31323 418 aa16.23■□□□□ 0.19
TRAPPC2L-207ENST00000564404 GPR162Q16538 588 aa16.23■□□□□ 0.19
TRAPPC2L-207ENST00000564404 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
TRAPPC2L-207ENST00000564404 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC2L-207ENST00000564404 C1QTNF8P60827 252 aa16.22■□□□□ 0.19
TRAPPC2L-207ENST00000564404 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
TRAPPC2L-207ENST00000564404 SLC39A6Q13433 755 aa16.22■□□□□ 0.19
TRAPPC2L-207ENST00000564404 TRAPPC3LQ5T215 181 aa16.22■□□□□ 0.19
TRAPPC2L-207ENST00000564404 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
TRAPPC2L-207ENST00000564404 KCPQ6ZWJ8 1503 aa16.21■□□□□ 0.19
TRAPPC2L-207ENST00000564404 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
TRAPPC2L-207ENST00000564404 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.19
TRAPPC2L-207ENST00000564404 RSPH6AQ9H0K4 717 aa16.21■□□□□ 0.19
TRAPPC2L-207ENST00000564404 RPS6KA4O75676 772 aa16.2■□□□□ 0.18
TRAPPC2L-207ENST00000564404 TEFQ10587 303 aa16.2■□□□□ 0.18
TRAPPC2L-207ENST00000564404 ADRA2BP18089 450 aa16.19■□□□□ 0.18
TRAPPC2L-207ENST00000564404 RFC4P35249 363 aa16.19■□□□□ 0.18
TRAPPC2L-207ENST00000564404 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
TRAPPC2L-207ENST00000564404 PHACTR3Q96KR7 559 aa16.19■□□□□ 0.18
TRAPPC2L-207ENST00000564404 KIF13BQ9NQT8 1826 aa16.19■□□□□ 0.18
TRAPPC2L-207ENST00000564404 N4BP2Q86UW6 1770 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC2L-207ENST00000564404 DNAJC10Q8IXB1 793 aa16.18■□□□□ 0.18
TRAPPC2L-207ENST00000564404 TTC5Q8N0Z6 440 aa16.18■□□□□ 0.18
TRAPPC2L-207ENST00000564404 MMP10P09238 476 aa16.17■□□□□ 0.18
TRAPPC2L-207ENST00000564404 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
TRAPPC2L-207ENST00000564404 CD2APQ9Y5K6 639 aa16.17■□□□□ 0.18
TRAPPC2L-207ENST00000564404 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
TRAPPC2L-207ENST00000564404 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
TRAPPC2L-207ENST00000564404 FCHSD2O94868 740 aa16.15■□□□□ 0.18
TRAPPC2L-207ENST00000564404 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
TRAPPC2L-207ENST00000564404 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
TRAPPC2L-207ENST00000564404 CEP350Q5VT06 3117 aa16.14■□□□□ 0.18
TRAPPC2L-207ENST00000564404 GYS1P13807 737 aa16.14■□□□□ 0.17
TRAPPC2L-207ENST00000564404 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
TRAPPC2L-207ENST00000564404 SRP68Q9UHB9 627 aaKnown RBP16.14■□□□□ 0.17
TRAPPC2L-207ENST00000564404 KIAA1551Q9HCM1 1747 aa16.14■□□□□ 0.17
TRAPPC2L-207ENST00000564404 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
TRAPPC2L-207ENST00000564404 AFDNP55196 1824 aaKnown RBP16.13■□□□□ 0.17
TRAPPC2L-207ENST00000564404 NEFMP07197 916 aa16.13■□□□□ 0.17
TRAPPC2L-207ENST00000564404 CYP19A1P11511 503 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC2L-207ENST00000564404 YBX3P16989 372 aaKnown RBP eCLIP16.13■□□□□ 0.177e-6■■□□□ 13.6
TRAPPC2L-207ENST00000564404 VSIG10Q8N0Z9 540 aa16.13■□□□□ 0.17
TRAPPC2L-207ENST00000564404 WWC3Q9ULE0 1092 aa16.13■□□□□ 0.17
TRAPPC2L-207ENST00000564404 ZNF790Q6PG37 636 aa16.12■□□□□ 0.17
TRAPPC2L-207ENST00000564404 MCM10Q7L590 875 aa16.12■□□□□ 0.17
TRAPPC2L-207ENST00000564404 ZNF496Q96IT1 587 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC2L-207ENST00000564404 ZBTB1Q9Y2K1 713 aa16.12■□□□□ 0.17
TRAPPC2L-207ENST00000564404 PARP3Q9Y6F1 533 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms