RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 SRCAPQ6ZRS2 3230 aa8.86□□□□□ -0.99
TCF4-220ENST00000563824 ARHGAP35Q9NRY4 1499 aa8.86□□□□□ -0.99
TCF4-220ENST00000563824 SOWAHBA6NEL2 793 aa8.86□□□□□ -0.99
TCF4-220ENST00000563824 NR1I2O75469 434 aa8.86□□□□□ -0.99
TCF4-220ENST00000563824 FMNL1O95466 1100 aaPredicted RBP8.86□□□□□ -0.99
TCF4-220ENST00000563824 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.992e-7■■■■■ 31.9
TCF4-220ENST00000563824 PPP1R12CQ9BZL4 782 aa8.86□□□□□ -0.99
TCF4-220ENST00000563824 ALG2Q9H553 416 aa8.86□□□□□ -0.99
TCF4-220ENST00000563824 SLAIN2Q9P270 581 aa8.86□□□□□ -0.99
TCF4-220ENST00000563824 MSH6P52701 1360 aa8.86□□□□□ -0.99
TCF4-220ENST00000563824 NKTRP30414 1462 aaKnown RBP8.85□□□□□ -0.99
TCF4-220ENST00000563824 LYPD8Q6UX82 237 aa8.85□□□□□ -0.99
TCF4-220ENST00000563824 TXNDC2Q86VQ3 553 aa8.85□□□□□ -0.99
TCF4-220ENST00000563824 CCDC125Q86Z20 511 aa8.85□□□□□ -0.99
TCF4-220ENST00000563824 WNT2BQ93097 391 aa8.85□□□□□ -0.99
TCF4-220ENST00000563824 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
TCF4-220ENST00000563824 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
TCF4-220ENST00000563824 CASKIN1Q8WXD9 1431 aa8.85□□□□□ -0.99
TCF4-220ENST00000563824 UBR1Q8IWV7 1749 aa8.85□□□□□ -0.99
TCF4-220ENST00000563824 SHPRHQ149N8 1683 aa8.85□□□□□ -0.99
TCF4-220ENST00000563824 CSB-PGBD3P0DP91 1061 aa8.84□□□□□ -0.99
TCF4-220ENST00000563824 LMOD1P29536 600 aaPredicted RBP8.84□□□□□ -0.99
TCF4-220ENST00000563824 APLP1P51693 650 aa8.84□□□□□ -0.99
TCF4-220ENST00000563824 CFAP70Q5T0N1 1121 aa8.84□□□□□ -0.99
TCF4-220ENST00000563824 NCOA3Q9Y6Q9 1424 aa8.84□□□□□ -0.99
TCF4-220ENST00000563824 PRDM15P57071 1507 aaPredicted RBP8.84□□□□□ -0.99
TCF4-220ENST00000563824 ATAD2Q6PL18 1390 aa8.84□□□□□ -0.99
TCF4-220ENST00000563824 CCNB3Q8WWL7 1395 aa8.84□□□□□ -0.99
TCF4-220ENST00000563824 COL16A1Q07092 1604 aaPredicted RBP8.83□□□□□ -1
TCF4-220ENST00000563824 A0A0G2JS52 829 aa8.83□□□□□ -1
TCF4-220ENST00000563824 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
TCF4-220ENST00000563824 JUNDP17535 347 aa8.83□□□□□ -1
TCF4-220ENST00000563824 RBM6P78332 1123 aaKnown RBP8.83□□□□□ -1
TCF4-220ENST00000563824 SALL2Q9Y467 1007 aaPredicted RBP8.83□□□□□ -1
TCF4-220ENST00000563824 MAP3K1Q13233 1512 aa8.83□□□□□ -1
TCF4-220ENST00000563824 TIAM1Q13009 1591 aa8.82□□□□□ -1
TCF4-220ENST00000563824 CTHP32929 405 aa8.82□□□□□ -1
TCF4-220ENST00000563824 NR1H3Q13133 447 aa8.82□□□□□ -1
TCF4-220ENST00000563824 PTPRNQ16849 979 aa8.82□□□□□ -1
TCF4-220ENST00000563824 BRICD5Q6PL45 260 aa8.82□□□□□ -1
TCF4-220ENST00000563824 SCUBE3Q8IX30 993 aa8.82□□□□□ -1
TCF4-220ENST00000563824 NGLY1Q96IV0 654 aa8.82□□□□□ -1
TCF4-220ENST00000563824 LRP6O75581 1613 aa8.82□□□□□ -1
TCF4-220ENST00000563824 ERVK-7P63135 1459 aa8.82□□□□□ -1
TCF4-220ENST00000563824 MBD5Q9P267 1494 aa8.82□□□□□ -1
TCF4-220ENST00000563824 ZBBXA8MT70 800 aa8.81□□□□□ -1
TCF4-220ENST00000563824 LTKP29376 864 aa8.81□□□□□ -1
TCF4-220ENST00000563824 PTPN5P54829 565 aa8.81□□□□□ -1
TCF4-220ENST00000563824 UCN2Q96RP3 112 aa8.81□□□□□ -1
TCF4-220ENST00000563824 MAP10Q9P2G4 905 aa8.81□□□□□ -1
TCF4-220ENST00000563824 FKBPLQ9UIM3 349 aa8.81□□□□□ -1
TCF4-220ENST00000563824 CAMSAP2Q08AD1 1489 aa8.81□□□□□ -1
TCF4-220ENST00000563824 KDM5AP29375 1690 aaKnown RBP8.81□□□□□ -1
TCF4-220ENST00000563824 AHDC1Q5TGY3 1603 aaPredicted RBP8.8□□□□□ -1
TCF4-220ENST00000563824 TFIP11Q9UBB9 837 aaKnown RBP8.8□□□□□ -1
TCF4-220ENST00000563824 NCOA2Q15596 1464 aa8.8□□□□□ -1
TCF4-220ENST00000563824 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
TCF4-220ENST00000563824 NWD1Q149M9 1564 aa8.79□□□□□ -1
TCF4-220ENST00000563824 FYCO1Q9BQS8 1478 aa8.79□□□□□ -1
TCF4-220ENST00000563824 TMEM2Q9UHN6 1383 aa8.79□□□□□ -1
TCF4-220ENST00000563824 F12P00748 615 aaPredicted RBP8.79□□□□□ -1
TCF4-220ENST00000563824 FBXO45P0C2W1 286 aa8.79□□□□□ -1
TCF4-220ENST00000563824 USTQ9Y2C2 406 aa8.79□□□□□ -1
TCF4-220ENST00000563824 RGS12O14924 1447 aa8.79□□□□□ -1
TCF4-220ENST00000563824 AFF2P51816 1311 aa8.79□□□□□ -1
TCF4-220ENST00000563824 THSD4Q6ZMP0 1018 aa8.78□□□□□ -1
TCF4-220ENST00000563824 THAP11Q96EK4 314 aa8.78□□□□□ -1
TCF4-220ENST00000563824 QTRT2Q9H974 415 aaKnown RBP8.78□□□□□ -1
TCF4-220ENST00000563824 MAFBQ9Y5Q3 323 aaPredicted RBP8.78□□□□□ -1
TCF4-220ENST00000563824 CCDC141Q6ZP82 1450 aa8.77□□□□□ -1
TCF4-220ENST00000563824 LRP5O75197 1615 aa8.77□□□□□ -1.01
TCF4-220ENST00000563824 CCNYL3P0C7X3 344 aa8.77□□□□□ -1.01
TCF4-220ENST00000563824 COPS2P61201 443 aa8.77□□□□□ -1.01
TCF4-220ENST00000563824 MSS51Q4VC12 460 aa8.77□□□□□ -1.01
TCF4-220ENST00000563824 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
TCF4-220ENST00000563824 TET3O43151 1660 aa8.77□□□□□ -1.01
TCF4-220ENST00000563824 ARHGAP31Q2M1Z3 1444 aa8.77□□□□□ -1.01
TCF4-220ENST00000563824 EIF2AK4Q9P2K8 1649 aaKnown RBP8.76□□□□□ -1.01
TCF4-220ENST00000563824 ATP9BO43861 1147 aa8.76□□□□□ -1.01
TCF4-220ENST00000563824 CDCA8Q53HL2 280 aa8.76□□□□□ -1.01
TCF4-220ENST00000563824 TBC1D9Q6ZT07 1266 aa8.76□□□□□ -1.01
TCF4-220ENST00000563824 SPSB2Q99619 263 aa8.76□□□□□ -1.01
TCF4-220ENST00000563824 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
TCF4-220ENST00000563824 SETBP1Q9Y6X0 1596 aa8.76□□□□□ -1.01
TCF4-220ENST00000563824 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
TCF4-220ENST00000563824 TSPY4P0CV99 314 aa8.75□□□□□ -1.01
TCF4-220ENST00000563824 TSPY10P0CW01 314 aa8.75□□□□□ -1.01
TCF4-220ENST00000563824 NBPF14Q5TI25 921 aa8.75□□□□□ -1.01
TCF4-220ENST00000563824 ARMC2Q8NEN0 867 aa8.75□□□□□ -1.01
TCF4-220ENST00000563824 SETD5Q9C0A6 1442 aa8.74□□□□□ -1.01
TCF4-220ENST00000563824 ZNF592Q92610 1267 aa8.74□□□□□ -1.01
TCF4-220ENST00000563824 C19orf44Q9H6X5 657 aa8.74□□□□□ -1.01
TCF4-220ENST00000563824 CFAP65Q6ZU64 1925 aaKnown RBP8.74□□□□□ -1.01
TCF4-220ENST00000563824 MTUS2Q5JR59 1369 aa8.73□□□□□ -1.01
TCF4-220ENST00000563824 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
TCF4-220ENST00000563824 ATF3P18847 181 aa8.73□□□□□ -1.01
TCF4-220ENST00000563824 PTK2Q05397 1052 aa8.73□□□□□ -1.01
TCF4-220ENST00000563824 LRRC59Q96AG4 307 aaKnown RBP8.73□□□□□ -1.01
TCF4-220ENST00000563824 PRDM9Q9NQV7 894 aa8.73□□□□□ -1.01
TCF4-220ENST00000563824 EFCAB6Q5THR3 1501 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms