RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 CHD4Q14839 1912 aa21.5■■□□□ 1.03
LPCAT4-205ENST00000563748 KDM6AO15550 1401 aaPredicted RBP21.5■■□□□ 1.03
LPCAT4-205ENST00000563748 ERVV-2B6SEH9 535 aa21.49■■□□□ 1.03
LPCAT4-205ENST00000563748 HSP90AB1P08238 724 aaKnown RBP21.49■■□□□ 1.03
LPCAT4-205ENST00000563748 IL13P35225 146 aa21.49■■□□□ 1.03
LPCAT4-205ENST00000563748 AMOTQ4VCS5 1084 aa21.49■■□□□ 1.03
LPCAT4-205ENST00000563748 DCAF5Q96JK2 942 aa21.49■■□□□ 1.03
LPCAT4-205ENST00000563748 AK7Q96M32 723 aa21.49■■□□□ 1.03
LPCAT4-205ENST00000563748 ATG3Q9NT62 314 aa21.49■■□□□ 1.03
LPCAT4-205ENST00000563748 ZNF530Q6P9A1 599 aaPredicted RBP21.48■■□□□ 1.03
LPCAT4-205ENST00000563748 NEFLP07196 543 aa21.48■■□□□ 1.03
LPCAT4-205ENST00000563748 AMIGO3Q86WK7 504 aa21.48■■□□□ 1.03
LPCAT4-205ENST00000563748 LINC00116Q8NCU8 138 aa21.48■■□□□ 1.03
LPCAT4-205ENST00000563748 SCN11AQ9UI33 1791 aa21.47■■□□□ 1.03
LPCAT4-205ENST00000563748 ITPK1Q13572 414 aa21.47■■□□□ 1.03
LPCAT4-205ENST00000563748 MSL1Q68DK7 614 aa21.47■■□□□ 1.03
LPCAT4-205ENST00000563748 SULT6B1Q6IMI4 303 aa21.47■■□□□ 1.03
LPCAT4-205ENST00000563748 COL5A3P25940 1745 aaPredicted RBP21.46■■□□□ 1.03
LPCAT4-205ENST00000563748 MTHFSP49914 203 aa21.46■■□□□ 1.03
LPCAT4-205ENST00000563748 KLHL34Q8N239 644 aa21.46■■□□□ 1.03
LPCAT4-205ENST00000563748 NPC1L1Q9UHC9 1359 aa21.45■■□□□ 1.02
LPCAT4-205ENST00000563748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.44■■□□□ 1.02
LPCAT4-205ENST00000563748 SSFA2P28290 1259 aa21.44■■□□□ 1.02
LPCAT4-205ENST00000563748 ATP6V1AP38606 617 aa21.44■■□□□ 1.02
LPCAT4-205ENST00000563748 UTRNP46939 3433 aa21.43■■□□□ 1.02
LPCAT4-205ENST00000563748 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
LPCAT4-205ENST00000563748 C1orf141Q5JVX7 400 aa21.43■■□□□ 1.02
LPCAT4-205ENST00000563748 NLGN2Q8NFZ4 835 aa21.43■■□□□ 1.02
LPCAT4-205ENST00000563748 PHF14O94880 888 aa21.42■■□□□ 1.02
LPCAT4-205ENST00000563748 CABP4P57796 275 aa21.42■■□□□ 1.02
LPCAT4-205ENST00000563748 HNRNPUQ00839 825 aaKnown RBP eCLIP21.42■■□□□ 1.02
LPCAT4-205ENST00000563748 CC2D1BQ5T0F9 858 aaKnown RBP21.42■■□□□ 1.02
LPCAT4-205ENST00000563748 SMIM5Q71RC9 77 aa21.42■■□□□ 1.02
LPCAT4-205ENST00000563748 SLC4A9Q96Q91 983 aa21.41■■□□□ 1.02
LPCAT4-205ENST00000563748 MRS2Q9HD23 443 aa21.41■■□□□ 1.02
LPCAT4-205ENST00000563748 GNPATO15228 680 aa21.4■■□□□ 1.02
LPCAT4-205ENST00000563748 GPR162Q16538 588 aa21.4■■□□□ 1.02
LPCAT4-205ENST00000563748 CICQ96RK0 1608 aaPredicted RBP21.4■■□□□ 1.02
LPCAT4-205ENST00000563748 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.02
LPCAT4-205ENST00000563748 ZBED9Q6R2W3 1325 aa21.38■■□□□ 1.01
LPCAT4-205ENST00000563748 MYH14Q7Z406 1995 aaKnown RBP21.38■■□□□ 1.01
LPCAT4-205ENST00000563748 RBM42Q9BTD8 480 aaKnown RBP21.37■■□□□ 1.01
LPCAT4-205ENST00000563748 CD2APQ9Y5K6 639 aa21.37■■□□□ 1.01
LPCAT4-205ENST00000563748 ADAMTS7Q9UKP4 1686 aa21.37■■□□□ 1.01
LPCAT4-205ENST00000563748 TJP1Q07157 1748 aa21.37■■□□□ 1.01
LPCAT4-205ENST00000563748 GOLGB1Q14789 3259 aaKnown RBP21.37■■□□□ 1.01
LPCAT4-205ENST00000563748 DIAPH1O60610 1272 aaKnown RBP21.36■■□□□ 1.01
LPCAT4-205ENST00000563748 RALBP1Q15311 655 aa21.36■■□□□ 1.01
LPCAT4-205ENST00000563748 AKAP4Q5JQC9 854 aa21.36■■□□□ 1.01
LPCAT4-205ENST00000563748 ERICH6BQ5W0A0 696 aa21.36■■□□□ 1.01
LPCAT4-205ENST00000563748 NFATC2IPQ8NCF5 419 aa21.36■■□□□ 1.01
LPCAT4-205ENST00000563748 MRC1P22897 1456 aa21.36■■□□□ 1.01
LPCAT4-205ENST00000563748 HMOX1P09601 288 aa21.36■■□□□ 1.01
LPCAT4-205ENST00000563748 RC3H1Q5TC82 1133 aaKnown RBP21.36■■□□□ 1.01
LPCAT4-205ENST00000563748 CNTNAP4Q9C0A0 1308 aa21.35■■□□□ 1.01
LPCAT4-205ENST00000563748 C4AP0C0L4 1744 aa21.34■■□□□ 1.01
LPCAT4-205ENST00000563748 RTCBQ9Y3I0 505 aaKnown RBP21.34■■□□□ 1.01
LPCAT4-205ENST00000563748 ZNF784Q8NCA9 323 aaPredicted RBP21.33■■□□□ 1
LPCAT4-205ENST00000563748 PTCD1O75127 700 aaKnown RBP21.32■■□□□ 1
LPCAT4-205ENST00000563748 YBX3P16989 372 aaKnown RBP eCLIP21.32■■□□□ 1
LPCAT4-205ENST00000563748 ADRA2BP18089 450 aa21.32■■□□□ 1
LPCAT4-205ENST00000563748 TRAPPC3LQ5T215 181 aa21.31■■□□□ 1
LPCAT4-205ENST00000563748 SLC52A2Q9HAB3 445 aa21.31■■□□□ 1
LPCAT4-205ENST00000563748 KIF13BQ9NQT8 1826 aa21.31■■□□□ 1
LPCAT4-205ENST00000563748 RPS6KA4O75676 772 aa21.3■■□□□ 1
LPCAT4-205ENST00000563748 CNGB1Q14028 1251 aaPredicted RBP21.3■■□□□ 1
LPCAT4-205ENST00000563748 MTHFSDQ2M296 383 aaKnown RBP21.3■■□□□ 1
LPCAT4-205ENST00000563748 LGR6Q9HBX8 967 aa21.3■■□□□ 1
LPCAT4-205ENST00000563748 RNMTO43148 476 aaKnown RBP21.29■■□□□ 1
LPCAT4-205ENST00000563748 GRIN3BO60391 1043 aa21.29■■□□□ 1
LPCAT4-205ENST00000563748 FKBP8Q14318 412 aa21.29■■□□□ 1
LPCAT4-205ENST00000563748 ARHGEF1Q92888 912 aaKnown RBP21.28■■□□□ 1
LPCAT4-205ENST00000563748 MYBBP1AQ9BQG0 1328 aaKnown RBP21.28■■□□□ 1
LPCAT4-205ENST00000563748 UBR2Q8IWV8 1755 aa21.27■■□□□ 1
LPCAT4-205ENST00000563748 KCPQ6ZWJ8 1503 aa21.27■■□□□ 1
LPCAT4-205ENST00000563748 MMP10P09238 476 aa21.27■■□□□ 1
LPCAT4-205ENST00000563748 CRKLP46109 303 aaKnown RBP21.27■■□□□ 1
LPCAT4-205ENST00000563748 KIAA1551Q9HCM1 1747 aa21.27■■□□□ 1
LPCAT4-205ENST00000563748 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
LPCAT4-205ENST00000563748 NLGN1Q8N2Q7 840 aa21.26■□□□□ 0.99
LPCAT4-205ENST00000563748 SIPA1L3O60292 1781 aaPredicted RBP21.25■□□□□ 0.99
LPCAT4-205ENST00000563748 U2SURPO15042 1029 aaKnown RBP21.25■□□□□ 0.99
LPCAT4-205ENST00000563748 GYS1P13807 737 aa21.24■□□□□ 0.99
LPCAT4-205ENST00000563748 RFC4P35249 363 aa21.24■□□□□ 0.99
LPCAT4-205ENST00000563748 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
LPCAT4-205ENST00000563748 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
LPCAT4-205ENST00000563748 C10orf71Q711Q0 1435 aa21.22■□□□□ 0.99
LPCAT4-205ENST00000563748 N4BP2Q86UW6 1770 aaPredicted RBP21.22■□□□□ 0.99
LPCAT4-205ENST00000563748 SLC39A6Q13433 755 aa21.22■□□□□ 0.99
LPCAT4-205ENST00000563748 DNAJC10Q8IXB1 793 aa21.22■□□□□ 0.99
LPCAT4-205ENST00000563748 CFAP53Q96M91 514 aa21.22■□□□□ 0.99
LPCAT4-205ENST00000563748 PXDNLA1KZ92 1463 aa21.21■□□□□ 0.99
LPCAT4-205ENST00000563748 USP42Q9H9J4 1324 aaKnown RBP21.2■□□□□ 0.98
LPCAT4-205ENST00000563748 GAS2L2Q8NHY3 880 aa21.2■□□□□ 0.98
LPCAT4-205ENST00000563748 CCDC87Q9NVE4 849 aa21.2■□□□□ 0.98
LPCAT4-205ENST00000563748 GNAT3A8MTJ3 354 aa21.19■□□□□ 0.98
LPCAT4-205ENST00000563748 CYP19A1P11511 503 aaPredicted RBP21.19■□□□□ 0.98
LPCAT4-205ENST00000563748 PPP2R1AP30153 589 aa21.19■□□□□ 0.98
LPCAT4-205ENST00000563748 PNISRQ8TF01 805 aaKnown RBP21.19■□□□□ 0.98
LPCAT4-205ENST00000563748 SRP68Q9UHB9 627 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms