RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 ANKRD36BQ8N2N9 1353 aa11.64□□□□□ -0.55
HERC2-203ENST00000563670 TTC21BQ7Z4L5 1316 aa11.63□□□□□ -0.55
HERC2-203ENST00000563670 KIF20BQ96Q89 1820 aa11.63□□□□□ -0.55
HERC2-203ENST00000563670 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
HERC2-203ENST00000563670 VEGFAP15692 232 aaPredicted RBP11.63□□□□□ -0.55
HERC2-203ENST00000563670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.55
HERC2-203ENST00000563670 ZC3H4Q9UPT8 1303 aaKnown RBP11.62□□□□□ -0.55
HERC2-203ENST00000563670 EDC4Q6P2E9 1401 aaKnown RBP11.62□□□□□ -0.55
HERC2-203ENST00000563670 NLRP6P59044 892 aa11.62□□□□□ -0.55
HERC2-203ENST00000563670 TGFB2P61812 414 aa11.62□□□□□ -0.55
HERC2-203ENST00000563670 CCNL1Q9UK58 526 aaPredicted RBP11.62□□□□□ -0.55
HERC2-203ENST00000563670 CD163L1Q9NR16 1453 aa11.62□□□□□ -0.55
HERC2-203ENST00000563670 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
HERC2-203ENST00000563670 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
HERC2-203ENST00000563670 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
HERC2-203ENST00000563670 HMGB2P26583 209 aaKnown RBP11.6□□□□□ -0.55
HERC2-203ENST00000563670 PANK3Q9H999 370 aa11.6□□□□□ -0.55
HERC2-203ENST00000563670 RNF181Q9P0P0 153 aa11.6□□□□□ -0.55
HERC2-203ENST00000563670 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
HERC2-203ENST00000563670 NSD2O96028 1365 aa11.59□□□□□ -0.55
HERC2-203ENST00000563670 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
HERC2-203ENST00000563670 VEGFBP49765 207 aa11.59□□□□□ -0.55
HERC2-203ENST00000563670 KNSTRNQ9Y448 316 aa11.59□□□□□ -0.55
HERC2-203ENST00000563670 NSD3Q9BZ95 1437 aa11.59□□□□□ -0.55
HERC2-203ENST00000563670 KIF13BQ9NQT8 1826 aa11.58□□□□□ -0.56
HERC2-203ENST00000563670 NME9Q86XW9 330 aa11.58□□□□□ -0.56
HERC2-203ENST00000563670 COG3Q96JB2 828 aa11.58□□□□□ -0.56
HERC2-203ENST00000563670 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
HERC2-203ENST00000563670 FCHSD2O94868 740 aa11.57□□□□□ -0.56
HERC2-203ENST00000563670 POTEHQ6S545 545 aa11.57□□□□□ -0.56
HERC2-203ENST00000563670 ARHGEF25Q86VW2 580 aa11.57□□□□□ -0.56
HERC2-203ENST00000563670 KCNH5Q8NCM2 988 aa11.57□□□□□ -0.56
HERC2-203ENST00000563670 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
HERC2-203ENST00000563670 VIRMAQ69YN4 1812 aaKnown RBP11.56□□□□□ -0.56
HERC2-203ENST00000563670 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
HERC2-203ENST00000563670 GLTPD2A6NH11 291 aa11.56□□□□□ -0.56
HERC2-203ENST00000563670 IL2RBP14784 551 aa11.56□□□□□ -0.56
HERC2-203ENST00000563670 MAP2K1Q02750 393 aaPredicted RBP11.56□□□□□ -0.56
HERC2-203ENST00000563670 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
HERC2-203ENST00000563670 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
HERC2-203ENST00000563670 ANKRD26Q9UPS8 1709 aa11.56□□□□□ -0.56
HERC2-203ENST00000563670 USP31Q70CQ4 1352 aa11.55□□□□□ -0.56
HERC2-203ENST00000563670 A0A0G2JLW4 131 aa11.55□□□□□ -0.56
HERC2-203ENST00000563670 SOX12O15370 315 aa11.55□□□□□ -0.56
HERC2-203ENST00000563670 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
HERC2-203ENST00000563670 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
HERC2-203ENST00000563670 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
HERC2-203ENST00000563670 ERBB3P21860 1342 aa11.55□□□□□ -0.56
HERC2-203ENST00000563670 LTN1O94822 1766 aa11.54□□□□□ -0.56
HERC2-203ENST00000563670 KDM6AO15550 1401 aaPredicted RBP11.54□□□□□ -0.56
HERC2-203ENST00000563670 MAP2P11137 1827 aaKnown RBP11.54□□□□□ -0.56
HERC2-203ENST00000563670 FYB1O15117 783 aa11.54□□□□□ -0.56
HERC2-203ENST00000563670 PRIM1P49642 420 aaKnown RBP11.54□□□□□ -0.56
HERC2-203ENST00000563670 DCAF5Q96JK2 942 aa11.54□□□□□ -0.56
HERC2-203ENST00000563670 C5P01031 1676 aa11.54□□□□□ -0.56
HERC2-203ENST00000563670 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
HERC2-203ENST00000563670 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
HERC2-203ENST00000563670 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
HERC2-203ENST00000563670 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
HERC2-203ENST00000563670 POTECB2RU33 542 aa11.52□□□□□ -0.57
HERC2-203ENST00000563670 DLL1O00548 723 aa11.52□□□□□ -0.57
HERC2-203ENST00000563670 DDX10Q13206 875 aaKnown RBP11.52□□□□□ -0.57
HERC2-203ENST00000563670 CHADLQ6NUI6 762 aa11.52□□□□□ -0.57
HERC2-203ENST00000563670 PASKQ96RG2 1323 aa11.52□□□□□ -0.57
HERC2-203ENST00000563670 TOGARAM1Q9Y4F4 1720 aa11.52□□□□□ -0.57
HERC2-203ENST00000563670 RGPD5Q99666 1765 aa11.51□□□□□ -0.57
HERC2-203ENST00000563670 DPEP1P16444 411 aa11.51□□□□□ -0.57
HERC2-203ENST00000563670 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
HERC2-203ENST00000563670 MORC1Q86VD1 984 aa11.51□□□□□ -0.57
HERC2-203ENST00000563670 AMIGO3Q86WK7 504 aa11.51□□□□□ -0.57
HERC2-203ENST00000563670 MIER1Q8N108 512 aa11.51□□□□□ -0.57
HERC2-203ENST00000563670 SYTL4Q96C24 671 aaPredicted RBP11.51□□□□□ -0.57
HERC2-203ENST00000563670 KCNA3P22001 575 aa11.5□□□□□ -0.57
HERC2-203ENST00000563670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
HERC2-203ENST00000563670 RASSF10A6NK89 507 aa11.49□□□□□ -0.57
HERC2-203ENST00000563670 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
HERC2-203ENST00000563670 MMP10P09238 476 aa11.49□□□□□ -0.57
HERC2-203ENST00000563670 AMPHP49418 695 aa11.49□□□□□ -0.57
HERC2-203ENST00000563670 HABP4Q5JVS0 413 aaKnown RBP11.49□□□□□ -0.57
HERC2-203ENST00000563670 CC2D1BQ5T0F9 858 aaKnown RBP11.49□□□□□ -0.57
HERC2-203ENST00000563670 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
HERC2-203ENST00000563670 SSFA2P28290 1259 aa11.48□□□□□ -0.57
HERC2-203ENST00000563670 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
HERC2-203ENST00000563670 SMIM5Q71RC9 77 aa11.48□□□□□ -0.57
HERC2-203ENST00000563670 PIM2Q9P1W9 311 aa11.48□□□□□ -0.57
HERC2-203ENST00000563670 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
HERC2-203ENST00000563670 NFAT5O94916 1531 aa11.48□□□□□ -0.57
HERC2-203ENST00000563670 THSD7BQ9C0I4 1608 aa11.48□□□□□ -0.57
HERC2-203ENST00000563670 C4BP0C0L5 1744 aa11.48□□□□□ -0.57
HERC2-203ENST00000563670 DOT1LQ8TEK3 1739 aa11.48□□□□□ -0.57
HERC2-203ENST00000563670 DDX54Q8TDD1 881 aaKnown RBP11.47□□□□□ -0.57
HERC2-203ENST00000563670 AK7Q96M32 723 aa11.47□□□□□ -0.57
HERC2-203ENST00000563670 SBF1O95248 1867 aa11.46□□□□□ -0.57
HERC2-203ENST00000563670 DALRD3Q5D0E6 543 aaKnown RBP11.46□□□□□ -0.57
HERC2-203ENST00000563670 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.57
HERC2-203ENST00000563670 NPC1L1Q9UHC9 1359 aa11.45□□□□□ -0.58
HERC2-203ENST00000563670 UBR3Q6ZT12 1888 aa11.45□□□□□ -0.58
HERC2-203ENST00000563670 WDR33Q9C0J8 1336 aaKnown RBP11.45□□□□□ -0.58
HERC2-203ENST00000563670 TAF1LQ8IZX4 1826 aa11.45□□□□□ -0.58
HERC2-203ENST00000563670 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms