RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 TAF1LQ8IZX4 1826 aa22.79■■□□□ 1.24
SPSB3-202ENST00000563668 ITPK1Q13572 414 aa22.79■■□□□ 1.24
SPSB3-202ENST00000563668 AKAP4Q5JQC9 854 aa22.79■■□□□ 1.24
SPSB3-202ENST00000563668 SMIM5Q71RC9 77 aa22.79■■□□□ 1.24
SPSB3-202ENST00000563668 CFAP53Q96M91 514 aa22.79■■□□□ 1.24
SPSB3-202ENST00000563668 SLC4A9Q96Q91 983 aa22.79■■□□□ 1.24
SPSB3-202ENST00000563668 LINC00116Q8NCU8 138 aa22.77■■□□□ 1.24
SPSB3-202ENST00000563668 PHACTR3Q96KR7 559 aa22.77■■□□□ 1.24
SPSB3-202ENST00000563668 SGIP1Q9BQI5 828 aa22.77■■□□□ 1.24
SPSB3-202ENST00000563668 MTFR1LQ9H019 292 aa22.77■■□□□ 1.24
SPSB3-202ENST00000563668 COL23A1Q86Y22 540 aaPredicted RBP22.77■■□□□ 1.24
SPSB3-202ENST00000563668 RSPH6AQ9H0K4 717 aa22.77■■□□□ 1.24
SPSB3-202ENST00000563668 SCN11AQ9UI33 1791 aa22.76■■□□□ 1.23
SPSB3-202ENST00000563668 QSER1Q2KHR3 1735 aa22.75■■□□□ 1.23
SPSB3-202ENST00000563668 RNMTO43148 476 aaKnown RBP22.75■■□□□ 1.23
SPSB3-202ENST00000563668 C4BP0C0L5 1744 aa22.74■■□□□ 1.23
SPSB3-202ENST00000563668 PRKAR2BP31323 418 aa22.74■■□□□ 1.23
SPSB3-202ENST00000563668 ATP6V1AP38606 617 aa22.74■■□□□ 1.23
SPSB3-202ENST00000563668 PPP1R1BQ9UD71 204 aaPredicted RBP22.74■■□□□ 1.23
SPSB3-202ENST00000563668 U2AF1L5P0DN76 240 aaPredicted RBP22.73■■□□□ 1.23
SPSB3-202ENST00000563668 U2AF1Q01081 240 aaKnown RBP eCLIP22.73■■□□□ 1.23
SPSB3-202ENST00000563668 RBM42Q9BTD8 480 aaKnown RBP22.73■■□□□ 1.23
SPSB3-202ENST00000563668 PRKRIP1Q9H875 184 aaPredicted RBP22.72■■□□□ 1.23
SPSB3-202ENST00000563668 SLC52A2Q9HAB3 445 aa22.72■■□□□ 1.23
SPSB3-202ENST00000563668 NUDCQ9Y266 331 aa22.72■■□□□ 1.23
SPSB3-202ENST00000563668 PTCD1O75127 700 aaKnown RBP22.71■■□□□ 1.23
SPSB3-202ENST00000563668 VIRMAQ69YN4 1812 aaKnown RBP22.7■■□□□ 1.23
SPSB3-202ENST00000563668 MSH5O43196 834 aa22.7■■□□□ 1.22
SPSB3-202ENST00000563668 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
SPSB3-202ENST00000563668 ADAMTS7Q9UKP4 1686 aa22.69■■□□□ 1.22
SPSB3-202ENST00000563668 SLC39A6Q13433 755 aa22.69■■□□□ 1.22
SPSB3-202ENST00000563668 SLC16A10Q8TF71 515 aa22.69■■□□□ 1.22
SPSB3-202ENST00000563668 AK7Q96M32 723 aa22.69■■□□□ 1.22
SPSB3-202ENST00000563668 PHF14O94880 888 aa22.68■■□□□ 1.22
SPSB3-202ENST00000563668 GAS2L2Q8NHY3 880 aa22.67■■□□□ 1.22
SPSB3-202ENST00000563668 UBR3Q6ZT12 1888 aa22.67■■□□□ 1.22
SPSB3-202ENST00000563668 MRC1P22897 1456 aa22.67■■□□□ 1.22
SPSB3-202ENST00000563668 GNAT3A8MTJ3 354 aa22.67■■□□□ 1.22
SPSB3-202ENST00000563668 FCHSD2O94868 740 aa22.67■■□□□ 1.22
SPSB3-202ENST00000563668 RALBP1Q15311 655 aa22.67■■□□□ 1.22
SPSB3-202ENST00000563668 MSL1Q68DK7 614 aa22.67■■□□□ 1.22
SPSB3-202ENST00000563668 MAP3K5Q99683 1374 aa22.66■■□□□ 1.22
SPSB3-202ENST00000563668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.66■■□□□ 1.22
SPSB3-202ENST00000563668 GNPATO15228 680 aa22.65■■□□□ 1.22
SPSB3-202ENST00000563668 ARXQ96QS3 562 aa22.65■■□□□ 1.22
SPSB3-202ENST00000563668 FHDC1Q9C0D6 1143 aaPredicted RBP22.65■■□□□ 1.22
SPSB3-202ENST00000563668 COL24A1Q17RW2 1714 aa22.65■■□□□ 1.22
SPSB3-202ENST00000563668 ZNF831Q5JPB2 1677 aa22.63■■□□□ 1.21
SPSB3-202ENST00000563668 SYT17Q9BSW7 474 aa22.62■■□□□ 1.21
SPSB3-202ENST00000563668 COL5A3P25940 1745 aaPredicted RBP22.62■■□□□ 1.21
SPSB3-202ENST00000563668 FLAD1Q8NFF5 587 aa22.62■■□□□ 1.21
SPSB3-202ENST00000563668 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
SPSB3-202ENST00000563668 HMGB2P26583 209 aaKnown RBP22.61■■□□□ 1.21
SPSB3-202ENST00000563668 SSFA2P28290 1259 aa22.61■■□□□ 1.21
SPSB3-202ENST00000563668 PLEKHF1Q96S99 279 aa22.61■■□□□ 1.21
SPSB3-202ENST00000563668 TJP1Q07157 1748 aa22.61■■□□□ 1.21
SPSB3-202ENST00000563668 DCTN1Q14203 1278 aa22.6■■□□□ 1.21
SPSB3-202ENST00000563668 KCPQ6ZWJ8 1503 aa22.6■■□□□ 1.21
SPSB3-202ENST00000563668 DNAJC10Q8IXB1 793 aa22.6■■□□□ 1.21
SPSB3-202ENST00000563668 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
SPSB3-202ENST00000563668 UTRNP46939 3433 aa22.59■■□□□ 1.21
SPSB3-202ENST00000563668 RC3H1Q5TC82 1133 aaKnown RBP22.59■■□□□ 1.21
SPSB3-202ENST00000563668 MCM10Q7L590 875 aa22.59■■□□□ 1.21
SPSB3-202ENST00000563668 MYBBP1AQ9BQG0 1328 aaKnown RBP22.58■■□□□ 1.21
SPSB3-202ENST00000563668 CNTNAP4Q9C0A0 1308 aa22.58■■□□□ 1.21
SPSB3-202ENST00000563668 POLD1P28340 1107 aa22.58■■□□□ 1.21
SPSB3-202ENST00000563668 SIPA1L3O60292 1781 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-202ENST00000563668 CRKLP46109 303 aaKnown RBP22.57■■□□□ 1.2
SPSB3-202ENST00000563668 TEFQ10587 303 aa22.57■■□□□ 1.2
SPSB3-202ENST00000563668 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
SPSB3-202ENST00000563668 INTS5Q6P9B9 1019 aaKnown RBP22.57■■□□□ 1.2
SPSB3-202ENST00000563668 RTCBQ9Y3I0 505 aaKnown RBP22.57■■□□□ 1.2
SPSB3-202ENST00000563668 GOLGB1Q14789 3259 aaKnown RBP22.57■■□□□ 1.2
SPSB3-202ENST00000563668 KCNQ3O43525 872 aa22.57■■□□□ 1.2
SPSB3-202ENST00000563668 RPS6KA4O75676 772 aa22.57■■□□□ 1.2
SPSB3-202ENST00000563668 ARHGEF1Q92888 912 aaKnown RBP22.57■■□□□ 1.2
SPSB3-202ENST00000563668 TRAPPC3LQ5T215 181 aa22.55■■□□□ 1.2
SPSB3-202ENST00000563668 KLHL34Q8N239 644 aa22.55■■□□□ 1.2
SPSB3-202ENST00000563668 ZNF496Q96IT1 587 aaPredicted RBP22.55■■□□□ 1.2
SPSB3-202ENST00000563668 CYP19A1P11511 503 aaPredicted RBP22.54■■□□□ 1.2
SPSB3-202ENST00000563668 ZNF790Q6PG37 636 aa22.54■■□□□ 1.2
SPSB3-202ENST00000563668 CICQ96RK0 1608 aaPredicted RBP22.54■■□□□ 1.2
SPSB3-202ENST00000563668 UBR2Q8IWV8 1755 aa22.54■■□□□ 1.2
SPSB3-202ENST00000563668 NLGN2Q8NFZ4 835 aa22.52■■□□□ 1.2
SPSB3-202ENST00000563668 MRS2Q9HD23 443 aa22.52■■□□□ 1.2
SPSB3-202ENST00000563668 RTF1Q92541 710 aaKnown RBP22.52■■□□□ 1.19
SPSB3-202ENST00000563668 BTBD11A6QL63 1104 aa22.51■■□□□ 1.19
SPSB3-202ENST00000563668 TTC5Q8N0Z6 440 aa22.51■■□□□ 1.19
SPSB3-202ENST00000563668 DLG5Q8TDM6 1919 aa22.5■■□□□ 1.19
SPSB3-202ENST00000563668 VSIG10Q8N0Z9 540 aa22.5■■□□□ 1.19
SPSB3-202ENST00000563668 CCDC87Q9NVE4 849 aa22.5■■□□□ 1.19
SPSB3-202ENST00000563668 SRP68Q9UHB9 627 aaKnown RBP22.5■■□□□ 1.19
SPSB3-202ENST00000563668 HTATSF1O43719 755 aaKnown RBP22.49■■□□□ 1.19
SPSB3-202ENST00000563668 NFE2L2Q16236 605 aa22.49■■□□□ 1.19
SPSB3-202ENST00000563668 THUMPD2Q9BTF0 503 aaKnown RBP22.49■■□□□ 1.19
SPSB3-202ENST00000563668 ZBTB1Q9Y2K1 713 aa22.49■■□□□ 1.19
SPSB3-202ENST00000563668 HEG1Q9ULI3 1381 aa22.48■■□□□ 1.19
SPSB3-202ENST00000563668 GYS1P13807 737 aa22.48■■□□□ 1.19
SPSB3-202ENST00000563668 ADRA2BP18089 450 aa22.48■■□□□ 1.19
SPSB3-202ENST00000563668 RFC4P35249 363 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms