RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 TRPC6Q9Y210 931 aa8.36□□□□□ -1.07
CNOT1-204ENST00000563130 TATP17735 454 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-204ENST00000563130 ZCRB1Q8TBF4 217 aaKnown RBP8.36□□□□□ -1.07
CNOT1-204ENST00000563130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.36□□□□□ -1.072e-10■□□□□ 9.9
CNOT1-204ENST00000563130 SHANK3Q9BYB0 1731 aa8.36□□□□□ -1.07
CNOT1-204ENST00000563130 DIAPH1O60610 1272 aaKnown RBP8.34□□□□□ -1.07
CNOT1-204ENST00000563130 RALBP1Q15311 655 aa8.34□□□□□ -1.07
CNOT1-204ENST00000563130 TMEM106CQ9BVX2 250 aa8.34□□□□□ -1.07
CNOT1-204ENST00000563130 BMP2KQ9NSY1 1161 aaPredicted RBP8.34□□□□□ -1.07
CNOT1-204ENST00000563130 PKD1L3Q7Z443 1732 aa8.34□□□□□ -1.07
CNOT1-204ENST00000563130 TRIM37O94972 964 aa8.34□□□□□ -1.07
CNOT1-204ENST00000563130 AEBP1Q8IUX7 1158 aa8.34□□□□□ -1.07
CNOT1-204ENST00000563130 TNS1Q9HBL0 1735 aaKnown RBP8.34□□□□□ -1.07
CNOT1-204ENST00000563130 SBF2Q86WG5 1849 aa8.34□□□□□ -1.07
CNOT1-204ENST00000563130 CYP27B1O15528 508 aa8.33□□□□□ -1.08
CNOT1-204ENST00000563130 ASTLQ6HA08 431 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-204ENST00000563130 SULT6B1Q6IMI4 303 aa8.33□□□□□ -1.08
CNOT1-204ENST00000563130 DDX54Q8TDD1 881 aaKnown RBP8.33□□□□□ -1.08
CNOT1-204ENST00000563130 PCDH11XQ9BZA7 1347 aa8.33□□□□□ -1.08
CNOT1-204ENST00000563130 PCDH11YQ9BZA8 1340 aa8.33□□□□□ -1.08
CNOT1-204ENST00000563130 PTF1AQ7RTS3 328 aa8.33□□□□□ -1.08
CNOT1-204ENST00000563130 DEFB132Q7Z7B7 95 aa8.33□□□□□ -1.08
CNOT1-204ENST00000563130 BCL11BQ9C0K0 894 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-204ENST00000563130 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
CNOT1-204ENST00000563130 ATMINO43313 823 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-204ENST00000563130 SF3B2Q13435 895 aaKnown RBP8.32□□□□□ -1.08
CNOT1-204ENST00000563130 NKX1-1Q15270 411 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-204ENST00000563130 CFAP53Q96M91 514 aa8.32□□□□□ -1.08
CNOT1-204ENST00000563130 PRKRIP1Q9H875 184 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-204ENST00000563130 KCNQ2O43526 872 aa8.32□□□□□ -1.08
CNOT1-204ENST00000563130 SPG7Q9UQ90 795 aa8.32□□□□□ -1.08
CNOT1-204ENST00000563130 BAG6P46379 1132 aa8.31□□□□□ -1.08
CNOT1-204ENST00000563130 CAMKK2Q96RR4 588 aa8.31□□□□□ -1.08
CNOT1-204ENST00000563130 NHSQ6T4R5 1651 aa8.31□□□□□ -1.08
CNOT1-204ENST00000563130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-204ENST00000563130 PLSCR1O15162 318 aa8.31□□□□□ -1.08
CNOT1-204ENST00000563130 APBA3O96018 575 aa8.31□□□□□ -1.08
CNOT1-204ENST00000563130 HMOX1P09601 288 aa8.31□□□□□ -1.08
CNOT1-204ENST00000563130 PHKG2P15735 406 aa8.31□□□□□ -1.08
CNOT1-204ENST00000563130 AMOTQ4VCS5 1084 aa8.31□□□□□ -1.08
CNOT1-204ENST00000563130 ZFP91Q96JP5 570 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-204ENST00000563130 MYBBP1AQ9BQG0 1328 aaKnown RBP8.31□□□□□ -1.08
CNOT1-204ENST00000563130 POTEIP0CG38 1075 aa8.3□□□□□ -1.08
CNOT1-204ENST00000563130 EN1Q05925 392 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-204ENST00000563130 PLEKHO1Q53GL0 409 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-204ENST00000563130 IFNL2Q8IZJ0 200 aa8.3□□□□□ -1.08
CNOT1-204ENST00000563130 ACSBG1Q96GR2 724 aa8.3□□□□□ -1.08
CNOT1-204ENST00000563130 ATN1P54259 1190 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-204ENST00000563130 NUDCQ9Y266 331 aa8.29□□□□□ -1.08
CNOT1-204ENST00000563130 RGPD3A6NKT7 1758 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-204ENST00000563130 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
CNOT1-204ENST00000563130 PRIM1P49642 420 aaKnown RBP8.29□□□□□ -1.08
CNOT1-204ENST00000563130 EZH2Q15910 746 aaKnown RBP8.29□□□□□ -1.08
CNOT1-204ENST00000563130 RGPD4Q7Z3J3 1758 aa8.29□□□□□ -1.08
CNOT1-204ENST00000563130 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
CNOT1-204ENST00000563130 DOT1LQ8TEK3 1739 aa8.28□□□□□ -1.08
CNOT1-204ENST00000563130 TOGARAM1Q9Y4F4 1720 aa8.28□□□□□ -1.08
CNOT1-204ENST00000563130 FCHSD2O94868 740 aa8.28□□□□□ -1.08
CNOT1-204ENST00000563130 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-204ENST00000563130 KDM6AO15550 1401 aaPredicted RBP8.27□□□□□ -1.08
CNOT1-204ENST00000563130 U2AF1L5P0DN76 240 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-204ENST00000563130 U2AF1Q01081 240 aaKnown RBP eCLIP8.27□□□□□ -1.09
CNOT1-204ENST00000563130 GOLGA2Q08379 1002 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 MTHFSDQ2M296 383 aaKnown RBP8.27□□□□□ -1.09
CNOT1-204ENST00000563130 DCAF5Q96JK2 942 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 TRIM35Q9UPQ4 493 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 BTAF1O14981 1849 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 RREB1Q92766 1687 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 STK25O00506 426 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 HSP90AB1P08238 724 aaKnown RBP8.27□□□□□ -1.09
CNOT1-204ENST00000563130 PRKAR2BP31323 418 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 AKAP4Q5JQC9 854 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 PHACTR3Q96KR7 559 aa8.27□□□□□ -1.09
CNOT1-204ENST00000563130 ERVV-2B6SEH9 535 aa8.26□□□□□ -1.09
CNOT1-204ENST00000563130 SYTL4Q96C24 671 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-204ENST00000563130 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
CNOT1-204ENST00000563130 C1orf141Q5JVX7 400 aa8.26□□□□□ -1.09
CNOT1-204ENST00000563130 PIGBQ92521 554 aa8.26□□□□□ -1.09
CNOT1-204ENST00000563130 PLEKHF1Q96S99 279 aa8.26□□□□□ -1.09
CNOT1-204ENST00000563130 ADAMTS7Q9UKP4 1686 aa8.25□□□□□ -1.09
CNOT1-204ENST00000563130 MPRIPQ6WCQ1 1025 aa8.25□□□□□ -1.09
CNOT1-204ENST00000563130 SLC39A7Q92504 469 aa8.25□□□□□ -1.09
CNOT1-204ENST00000563130 STK24Q9Y6E0 443 aa8.25□□□□□ -1.09
CNOT1-204ENST00000563130 NUP188Q5SRE5 1749 aa8.25□□□□□ -1.09
CNOT1-204ENST00000563130 ITGB4P16144 1822 aa8.25□□□□□ -1.09
CNOT1-204ENST00000563130 KAT6BQ8WYB5 2073 aa8.24□□□□□ -1.09
CNOT1-204ENST00000563130 PELP1Q8IZL8 1130 aaKnown RBP8.24□□□□□ -1.09
CNOT1-204ENST00000563130 HS6ST3Q8IZP7 471 aa8.24□□□□□ -1.09
CNOT1-204ENST00000563130 GAS2L2Q8NHY3 880 aa8.24□□□□□ -1.09
CNOT1-204ENST00000563130 IER5LQ5T953 404 aa8.24□□□□□ -1.09
CNOT1-204ENST00000563130 LRRC4BQ9NT99 713 aa8.24□□□□□ -1.09
CNOT1-204ENST00000563130 MRC1P22897 1456 aa8.24□□□□□ -1.09
CNOT1-204ENST00000563130 LY75O60449 1722 aa8.24□□□□□ -1.09
CNOT1-204ENST00000563130 ANP32CO43423 234 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 C7P10643 843 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 MKRN3Q13064 507 aaKnown RBP8.23□□□□□ -1.09
CNOT1-204ENST00000563130 SLC27A3Q5K4L6 730 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 LGR6Q9HBX8 967 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 SCN11AQ9UI33 1791 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 252.7 ms