RNA–Protein interactions for RNA: ENST00000563028.1

KIFC3-213, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-213ENST00000563028 LINC00116Q8NCU8 138 aa31.57■■■□□ 2.64
KIFC3-213ENST00000563028 U2SURPO15042 1029 aaKnown RBP31.56■■■□□ 2.64
KIFC3-213ENST00000563028 ITPK1Q13572 414 aa31.56■■■□□ 2.64
KIFC3-213ENST00000563028 FLAD1Q8NFF5 587 aa31.56■■■□□ 2.64
KIFC3-213ENST00000563028 SYT17Q9BSW7 474 aa31.56■■■□□ 2.64
KIFC3-213ENST00000563028 DCAF8L1A6NGE4 600 aa31.53■■■□□ 2.64
KIFC3-213ENST00000563028 NFATC2IPQ8NCF5 419 aa31.53■■■□□ 2.64
KIFC3-213ENST00000563028 CFAP53Q96M91 514 aa31.53■■■□□ 2.64
KIFC3-213ENST00000563028 RBM42Q9BTD8 480 aaKnown RBP31.53■■■□□ 2.64
KIFC3-213ENST00000563028 COL24A1Q17RW2 1714 aa31.52■■■□□ 2.64
KIFC3-213ENST00000563028 MTHFSDQ2M296 383 aaKnown RBP31.52■■■□□ 2.64
KIFC3-213ENST00000563028 AMIGO3Q86WK7 504 aa31.52■■■□□ 2.64
KIFC3-213ENST00000563028 PPP2R1AP30153 589 aa31.51■■■□□ 2.63
KIFC3-213ENST00000563028 PHF14O94880 888 aa31.5■■■□□ 2.63
KIFC3-213ENST00000563028 SLC4A9Q96Q91 983 aa31.5■■■□□ 2.63
KIFC3-213ENST00000563028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.49■■■□□ 2.63
KIFC3-213ENST00000563028 MSL1Q68DK7 614 aa31.49■■■□□ 2.63
KIFC3-213ENST00000563028 SMIM5Q71RC9 77 aa31.49■■■□□ 2.63
KIFC3-213ENST00000563028 LGR6Q9HBX8 967 aa31.49■■■□□ 2.63
KIFC3-213ENST00000563028 SCN11AQ9UI33 1791 aa31.48■■■□□ 2.63
KIFC3-213ENST00000563028 UBR3Q6ZT12 1888 aa31.47■■■□□ 2.63
KIFC3-213ENST00000563028 GNPATO15228 680 aa31.47■■■□□ 2.63
KIFC3-213ENST00000563028 MAP3K5Q99683 1374 aa31.46■■■□□ 2.63
KIFC3-213ENST00000563028 RNMTO43148 476 aaKnown RBP31.46■■■□□ 2.63
KIFC3-213ENST00000563028 SSFA2P28290 1259 aa31.46■■■□□ 2.63
KIFC3-213ENST00000563028 KLHL34Q8N239 644 aa31.46■■■□□ 2.63
KIFC3-213ENST00000563028 PTCD1O75127 700 aaKnown RBP31.45■■■□□ 2.63
KIFC3-213ENST00000563028 SLC52A2Q9HAB3 445 aa31.45■■■□□ 2.63
KIFC3-213ENST00000563028 NUDCQ9Y266 331 aa31.44■■■□□ 2.62
KIFC3-213ENST00000563028 ZNF831Q5JPB2 1677 aa31.44■■■□□ 2.62
KIFC3-213ENST00000563028 GAS2L2Q8NHY3 880 aa31.4■■■□□ 2.62
KIFC3-213ENST00000563028 RTCBQ9Y3I0 505 aaKnown RBP31.39■■■□□ 2.62
KIFC3-213ENST00000563028 MRC1P22897 1456 aa31.39■■■□□ 2.62
KIFC3-213ENST00000563028 PRKAR2BP31323 418 aa31.38■■■□□ 2.61
KIFC3-213ENST00000563028 RC3H1Q5TC82 1133 aaKnown RBP31.38■■■□□ 2.61
KIFC3-213ENST00000563028 RSPH6AQ9H0K4 717 aa31.38■■■□□ 2.61
KIFC3-213ENST00000563028 CNTNAP4Q9C0A0 1308 aa31.38■■■□□ 2.61
KIFC3-213ENST00000563028 U2AF1L5P0DN76 240 aaPredicted RBP31.37■■■□□ 2.61
KIFC3-213ENST00000563028 U2AF1Q01081 240 aaKnown RBP eCLIP31.37■■■□□ 2.61
KIFC3-213ENST00000563028 COL5A3P25940 1745 aaPredicted RBP31.37■■■□□ 2.61
KIFC3-213ENST00000563028 ADAMTS7Q9UKP4 1686 aa31.36■■■□□ 2.61
KIFC3-213ENST00000563028 VIRMAQ69YN4 1812 aaKnown RBP31.35■■■□□ 2.61
KIFC3-213ENST00000563028 GNAT3A8MTJ3 354 aa31.35■■■□□ 2.61
KIFC3-213ENST00000563028 SLC39A6Q13433 755 aa31.35■■■□□ 2.61
KIFC3-213ENST00000563028 TRAPPC3LQ5T215 181 aa31.35■■■□□ 2.61
KIFC3-213ENST00000563028 PHACTR3Q96KR7 559 aa31.34■■■□□ 2.61
KIFC3-213ENST00000563028 RPS6KA4O75676 772 aa31.33■■■□□ 2.61
KIFC3-213ENST00000563028 NLGN2Q8NFZ4 835 aa31.33■■■□□ 2.61
KIFC3-213ENST00000563028 CRKLP46109 303 aaKnown RBP31.31■■■□□ 2.6
KIFC3-213ENST00000563028 IL17REQ8NFR9 667 aa31.31■■■□□ 2.6
KIFC3-213ENST00000563028 ADRA2BP18089 450 aa31.3■■■□□ 2.6
KIFC3-213ENST00000563028 YY1P25490 414 aa31.3■■■□□ 2.6
KIFC3-213ENST00000563028 ARHGEF1Q92888 912 aaKnown RBP31.3■■■□□ 2.6
KIFC3-213ENST00000563028 TJP1Q07157 1748 aa31.29■■■□□ 2.6
KIFC3-213ENST00000563028 FCHSD2O94868 740 aa31.29■■■□□ 2.6
KIFC3-213ENST00000563028 TEFQ10587 303 aa31.28■■■□□ 2.6
KIFC3-213ENST00000563028 DDX10Q13206 875 aaKnown RBP31.28■■■□□ 2.6
KIFC3-213ENST00000563028 DNAJC10Q8IXB1 793 aa31.28■■■□□ 2.6
KIFC3-213ENST00000563028 MYH14Q7Z406 1995 aaKnown RBP31.28■■■□□ 2.6
KIFC3-213ENST00000563028 CICQ96RK0 1608 aaPredicted RBP31.27■■■□□ 2.6
KIFC3-213ENST00000563028 RFC4P35249 363 aa31.27■■■□□ 2.6
KIFC3-213ENST00000563028 GPR162Q16538 588 aa31.27■■■□□ 2.6
KIFC3-213ENST00000563028 KCPQ6ZWJ8 1503 aa31.26■■■□□ 2.59
KIFC3-213ENST00000563028 CD2APQ9Y5K6 639 aa31.26■■■□□ 2.59
KIFC3-213ENST00000563028 PELP1Q8IZL8 1130 aaKnown RBP31.25■■■□□ 2.59
KIFC3-213ENST00000563028 INTS5Q6P9B9 1019 aaKnown RBP31.24■■■□□ 2.59
KIFC3-213ENST00000563028 TTC5Q8N0Z6 440 aa31.24■■■□□ 2.59
KIFC3-213ENST00000563028 NLGN1Q8N2Q7 840 aa31.23■■■□□ 2.59
KIFC3-213ENST00000563028 CEMIPQ8WUJ3 1361 aa31.22■■■□□ 2.59
KIFC3-213ENST00000563028 MMP10P09238 476 aa31.22■■■□□ 2.59
KIFC3-213ENST00000563028 CCDC87Q9NVE4 849 aa31.22■■■□□ 2.59
KIFC3-213ENST00000563028 CYP19A1P11511 503 aaPredicted RBP31.21■■■□□ 2.59
KIFC3-213ENST00000563028 VSIG10Q8N0Z9 540 aa31.21■■■□□ 2.59
KIFC3-213ENST00000563028 GYS1P13807 737 aa31.2■■■□□ 2.59
KIFC3-213ENST00000563028 RALBP1Q15311 655 aa31.2■■■□□ 2.59
KIFC3-213ENST00000563028 ZNF790Q6PG37 636 aa31.19■■■□□ 2.58
KIFC3-213ENST00000563028 UBR2Q8IWV8 1755 aa31.18■■■□□ 2.58
KIFC3-213ENST00000563028 RTF1Q92541 710 aaKnown RBP31.18■■■□□ 2.58
KIFC3-213ENST00000563028 C4AP0C0L4 1744 aa31.18■■■□□ 2.58
KIFC3-213ENST00000563028 SIPA1L3O60292 1781 aaPredicted RBP31.17■■■□□ 2.58
KIFC3-213ENST00000563028 UTRNP46939 3433 aa31.16■■■□□ 2.58
KIFC3-213ENST00000563028 ZNF496Q96IT1 587 aaPredicted RBP31.16■■■□□ 2.58
KIFC3-213ENST00000563028 SRP68Q9UHB9 627 aaKnown RBP31.16■■■□□ 2.58
KIFC3-213ENST00000563028 NEFMP07197 916 aa31.15■■■□□ 2.58
KIFC3-213ENST00000563028 MCM10Q7L590 875 aa31.15■■■□□ 2.58
KIFC3-213ENST00000563028 SOS1Q07889 1333 aaPredicted RBP31.15■■■□□ 2.58
KIFC3-213ENST00000563028 USP42Q9H9J4 1324 aaKnown RBP31.15■■■□□ 2.58
KIFC3-213ENST00000563028 BTBD11A6QL63 1104 aa31.14■■■□□ 2.58
KIFC3-213ENST00000563028 ZBTB1Q9Y2K1 713 aa31.14■■■□□ 2.58
KIFC3-213ENST00000563028 YBX3P16989 372 aaKnown RBP eCLIP31.13■■■□□ 2.57
KIFC3-213ENST00000563028 HEG1Q9ULI3 1381 aa31.13■■■□□ 2.57
KIFC3-213ENST00000563028 HTATSF1O43719 755 aaKnown RBP31.12■■■□□ 2.57
KIFC3-213ENST00000563028 STARD3NLO95772 234 aa31.12■■■□□ 2.57
KIFC3-213ENST00000563028 DCTN1Q14203 1278 aa31.12■■■□□ 2.57
KIFC3-213ENST00000563028 KCNQ3O43525 872 aa31.11■■■□□ 2.57
KIFC3-213ENST00000563028 FMNL2Q96PY5 1086 aa31.11■■■□□ 2.57
KIFC3-213ENST00000563028 PLEKHF1Q96S99 279 aa31.11■■■□□ 2.57
KIFC3-213ENST00000563028 FKBP8Q14318 412 aa31.1■■■□□ 2.57
KIFC3-213ENST00000563028 PARP3Q9Y6F1 533 aa31.1■■■□□ 2.57
KIFC3-213ENST00000563028 GOLGB1Q14789 3259 aaKnown RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms