RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PRDM11Q9NQV5 511 aa11.88□□□□□ -0.51
LINC00838-201ENST00000562956 SOS1Q07889 1333 aaPredicted RBP11.88□□□□□ -0.51
LINC00838-201ENST00000562956 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
LINC00838-201ENST00000562956 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
LINC00838-201ENST00000562956 C8orf34Q49A92 452 aa11.88□□□□□ -0.51
LINC00838-201ENST00000562956 SMC5Q8IY18 1101 aa11.87□□□□□ -0.51
LINC00838-201ENST00000562956 F6X3S4 739 aa11.87□□□□□ -0.51
LINC00838-201ENST00000562956 FAM161AQ3B820 660 aa11.87□□□□□ -0.51
LINC00838-201ENST00000562956 OVOS2A0A0G2JMS6 1433 aa11.87□□□□□ -0.51
LINC00838-201ENST00000562956 SIRT2Q8IXJ6 389 aa11.87□□□□□ -0.51
LINC00838-201ENST00000562956 FLIIQ13045 1269 aa11.86□□□□□ -0.51
LINC00838-201ENST00000562956 HDGFL1Q5TGJ6 251 aa11.86□□□□□ -0.51
LINC00838-201ENST00000562956 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
LINC00838-201ENST00000562956 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
LINC00838-201ENST00000562956 PHKG2P15735 406 aa11.85□□□□□ -0.51
LINC00838-201ENST00000562956 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
LINC00838-201ENST00000562956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC00838-201ENST00000562956 EIF2S2P20042 333 aaKnown RBP11.85□□□□□ -0.51
LINC00838-201ENST00000562956 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
LINC00838-201ENST00000562956 FKBP5Q13451 457 aaPredicted RBP11.84□□□□□ -0.51
LINC00838-201ENST00000562956 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
LINC00838-201ENST00000562956 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
LINC00838-201ENST00000562956 NHSL1Q5SYE7 1610 aa11.84□□□□□ -0.51
LINC00838-201ENST00000562956 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
LINC00838-201ENST00000562956 MEIS3Q99687 375 aa11.84□□□□□ -0.51
LINC00838-201ENST00000562956 CYP27B1O15528 508 aa11.83□□□□□ -0.51
LINC00838-201ENST00000562956 HOXB7P09629 217 aa11.83□□□□□ -0.51
LINC00838-201ENST00000562956 IL27Q8NEV9 243 aa11.83□□□□□ -0.51
LINC00838-201ENST00000562956 PHAXQ9H814 394 aaKnown RBP11.83□□□□□ -0.51
LINC00838-201ENST00000562956 COL5A2P05997 1499 aaPredicted RBP11.83□□□□□ -0.52
LINC00838-201ENST00000562956 NUCB1Q02818 461 aa11.83□□□□□ -0.52
LINC00838-201ENST00000562956 TOM1L2Q6ZVM7 507 aa11.83□□□□□ -0.52
LINC00838-201ENST00000562956 IFNL2Q8IZJ0 200 aa11.83□□□□□ -0.52
LINC00838-201ENST00000562956 ADAMTS7Q9UKP4 1686 aa11.83□□□□□ -0.52
LINC00838-201ENST00000562956 ANP32AP39687 249 aaKnown RBP11.83□□□□□ -0.52
LINC00838-201ENST00000562956 CCT4P50991 539 aaKnown RBP11.83□□□□□ -0.52
LINC00838-201ENST00000562956 CHPF2Q9P2E5 772 aa11.83□□□□□ -0.52
LINC00838-201ENST00000562956 NOP58Q9Y2X3 529 aaKnown RBP11.83□□□□□ -0.52
LINC00838-201ENST00000562956 SLC52A2Q9HAB3 445 aa11.82□□□□□ -0.52
LINC00838-201ENST00000562956 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
LINC00838-201ENST00000562956 ABCA3Q99758 1704 aa11.82□□□□□ -0.52
LINC00838-201ENST00000562956 PRAMEF22A3QJZ6 481 aa11.82□□□□□ -0.52
LINC00838-201ENST00000562956 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
LINC00838-201ENST00000562956 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
LINC00838-201ENST00000562956 PLEKHG2Q9H7P9 1386 aa11.81□□□□□ -0.52
LINC00838-201ENST00000562956 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
LINC00838-201ENST00000562956 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
LINC00838-201ENST00000562956 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
LINC00838-201ENST00000562956 SLC39A6Q13433 755 aa11.81□□□□□ -0.52
LINC00838-201ENST00000562956 LNPKQ9C0E8 428 aa11.81□□□□□ -0.52
LINC00838-201ENST00000562956 ANXA1P04083 346 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 CEP85Q6P2H3 762 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
LINC00838-201ENST00000562956 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 ANKRD45Q5TZF3 282 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 LTBP4Q8N2S1 1624 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
LINC00838-201ENST00000562956 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
LINC00838-201ENST00000562956 EVA1CP58658 441 aa11.79□□□□□ -0.52
LINC00838-201ENST00000562956 ROBO1Q9Y6N7 1651 aa11.79□□□□□ -0.52
LINC00838-201ENST00000562956 RPAP2Q8IXW5 612 aaPredicted RBP11.79□□□□□ -0.52
LINC00838-201ENST00000562956 IPO9Q96P70 1041 aaKnown RBP11.79□□□□□ -0.52
LINC00838-201ENST00000562956 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
LINC00838-201ENST00000562956 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
LINC00838-201ENST00000562956 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
LINC00838-201ENST00000562956 PROSER3Q2NL68 480 aa11.78□□□□□ -0.52
LINC00838-201ENST00000562956 ZCRB1Q8TBF4 217 aaKnown RBP11.78□□□□□ -0.52
LINC00838-201ENST00000562956 DBF4Q9UBU7 674 aaPredicted RBP11.78□□□□□ -0.52
LINC00838-201ENST00000562956 SEC24BO95487 1268 aa11.78□□□□□ -0.52
LINC00838-201ENST00000562956 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
LINC00838-201ENST00000562956 DCTPP1Q9H773 170 aa11.78□□□□□ -0.52
LINC00838-201ENST00000562956 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.52
LINC00838-201ENST00000562956 IL2RBP14784 551 aa11.77□□□□□ -0.52
LINC00838-201ENST00000562956 MRC1P22897 1456 aa11.77□□□□□ -0.53
LINC00838-201ENST00000562956 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.53
LINC00838-201ENST00000562956 PCDH11XQ9BZA7 1347 aa11.77□□□□□ -0.53
LINC00838-201ENST00000562956 PCDH11YQ9BZA8 1340 aa11.77□□□□□ -0.53
LINC00838-201ENST00000562956 BTG4Q9NY30 223 aa11.77□□□□□ -0.53
LINC00838-201ENST00000562956 PXDNLA1KZ92 1463 aa11.77□□□□□ -0.53
LINC00838-201ENST00000562956 PI4KAP2A4QPH2 592 aa11.76□□□□□ -0.53
LINC00838-201ENST00000562956 PI4KAP1Q8N8J0 262 aa11.76□□□□□ -0.53
LINC00838-201ENST00000562956 ZNF496Q96IT1 587 aaPredicted RBP11.76□□□□□ -0.53
LINC00838-201ENST00000562956 USP35Q9P2H5 1018 aa11.76□□□□□ -0.53
LINC00838-201ENST00000562956 GNAI2P04899 355 aa11.76□□□□□ -0.53
LINC00838-201ENST00000562956 CABP4P57796 275 aa11.76□□□□□ -0.53
LINC00838-201ENST00000562956 USP44Q9H0E7 712 aa11.76□□□□□ -0.53
LINC00838-201ENST00000562956 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
LINC00838-201ENST00000562956 ADCY9O60503 1353 aa11.75□□□□□ -0.53
LINC00838-201ENST00000562956 GNAI3P08754 354 aa11.75□□□□□ -0.53
LINC00838-201ENST00000562956 PDIA6Q15084 440 aa11.75□□□□□ -0.53
LINC00838-201ENST00000562956 DNAAF4Q8WXU2 420 aa11.75□□□□□ -0.53
LINC00838-201ENST00000562956 BEND3Q5T5X7 828 aa11.75□□□□□ -0.53
LINC00838-201ENST00000562956 DDX54Q8TDD1 881 aaKnown RBP11.75□□□□□ -0.53
LINC00838-201ENST00000562956 SRCIN1Q9C0H9 1055 aa11.75□□□□□ -0.53
LINC00838-201ENST00000562956 PARP4Q9UKK3 1724 aaKnown RBP11.75□□□□□ -0.53
LINC00838-201ENST00000562956 TTC5Q8N0Z6 440 aa11.74□□□□□ -0.53
LINC00838-201ENST00000562956 LRRFIP2Q9Y608 721 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms