RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 TRAK1Q9UPV9 953 aa5.92□□□□□ -1.46
TCF4-215ENST00000562638 FRMD4BQ9Y2L6 1034 aa5.92□□□□□ -1.46
TCF4-215ENST00000562638 BOLA1Q9Y3E2 137 aa5.92□□□□□ -1.46
TCF4-215ENST00000562638 RRBP1Q9P2E9 1410 aaKnown RBP5.91□□□□□ -1.46
TCF4-215ENST00000562638 CCDC88BA6NC98 1476 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 SMAPO00193 183 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 EPB41L2O43491 1005 aaKnown RBP5.91□□□□□ -1.46
TCF4-215ENST00000562638 PAX3P23760 479 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 SRPK2P78362 688 aaKnown RBP5.91□□□□□ -1.46
TCF4-215ENST00000562638 NCBP1Q09161 790 aaKnown RBP5.91□□□□□ -1.46
TCF4-215ENST00000562638 SART3Q15020 963 aaKnown RBP5.91□□□□□ -1.46
TCF4-215ENST00000562638 PDCD2Q16342 344 aaPredicted RBP5.91□□□□□ -1.46
TCF4-215ENST00000562638 TSNAXIP1Q2TAA8 658 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 ZKSCAN2Q63HK3 967 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 SYT10Q6XYQ8 523 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 MMS22LQ6ZRQ5 1243 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 PACS2Q86VP3 889 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 IFNLR1Q8IU57 520 aaPredicted RBP5.91□□□□□ -1.46
TCF4-215ENST00000562638 TSC1Q92574 1164 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
TCF4-215ENST00000562638 MIEF2Q96C03 454 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 IRAK4Q9NWZ3 460 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 RPGRIP1LQ68CZ1 1315 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 FHAD1B1AJZ9 1412 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 YEATS2Q9ULM3 1422 aa5.91□□□□□ -1.46
TCF4-215ENST00000562638 TPD52L2O43399 206 aaKnown RBP5.9□□□□□ -1.46
TCF4-215ENST00000562638 MYBL2P10244 700 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 TNNT1P13805 278 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 RPS6KA3P51812 740 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 TBC1D8BQ0IIM8 1120 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 IFT88Q13099 833 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 SLFNL1Q499Z3 407 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 AP1ARQ63HQ0 302 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 NUTM1Q86Y26 1132 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 FMNL3Q8IVF7 1028 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 SH3GL3Q99963 347 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 UBA5Q9GZZ9 404 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 IRF2BPLQ9H1B7 796 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 SLKQ9H2G2 1235 aaPredicted RBP5.9□□□□□ -1.46
TCF4-215ENST00000562638 DIAPH3Q9NSV4 1193 aa5.9□□□□□ -1.46
TCF4-215ENST00000562638 CIZ1Q9ULV3 898 aaPredicted RBP5.9□□□□□ -1.46
TCF4-215ENST00000562638 CGNL1Q0VF96 1302 aa5.9□□□□□ -1.47
TCF4-215ENST00000562638 H7C1W4 665 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 TRIM66O15016 1216 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 ECEL1O95672 775 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 HOXB1P14653 301 aaPredicted RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 MCCD1P59942 119 aaPredicted RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 SF3B2Q13435 895 aaKnown RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 NOM1Q5C9Z4 860 aaKnown RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 RBM26Q5T8P6 1007 aaKnown RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 LEKR1Q6ZMV7 388 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 CENPQQ7L2Z9 268 aaPredicted RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 MICALL1Q8N3F8 863 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 EVI5LQ96CN4 794 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 C22orf23Q9BZE7 217 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 TMX4Q9H1E5 349 aaPredicted RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 UTP6Q9NYH9 597 aaKnown RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.89□□□□□ -1.47
TCF4-215ENST00000562638 ERBB3P21860 1342 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 SOS1Q07889 1333 aaPredicted RBP5.89□□□□□ -1.47
TCF4-215ENST00000562638 MIA2Q96PC5 1412 aa5.89□□□□□ -1.47
TCF4-215ENST00000562638 RBM47A0AV96 593 aaKnown RBP5.88□□□□□ -1.47
TCF4-215ENST00000562638 ERICH4A6NGS2 130 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 OATP04181 439 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 TRPC1P48995 793 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 PSMC1P62191 440 aaKnown RBP5.88□□□□□ -1.47
TCF4-215ENST00000562638 CCDC181Q5TID7 509 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 NUTM2GQ5VZR2 741 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 NAIF1Q69YI7 327 aaPredicted RBP5.88□□□□□ -1.47
TCF4-215ENST00000562638 TTC19Q6DKK2 380 aaPredicted RBP5.88□□□□□ -1.47
TCF4-215ENST00000562638 KLHL10Q6JEL2 608 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 KCNV1Q6PIU1 500 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 NOL8Q76FK4 1167 aaKnown RBP5.88□□□□□ -1.47
TCF4-215ENST00000562638 C10orf67Q8IYJ2 551 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 SAMD3Q8N6K7 520 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 FBXO18Q8NFZ0 1043 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 ZNF483Q8TF39 744 aaPredicted RBP5.88□□□□□ -1.47
TCF4-215ENST00000562638 SPOCK2Q92563 424 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 SNX21Q969T3 373 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 TRERF1Q96PN7 1200 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 POLR3CQ9BUI4 534 aaPredicted RBP5.88□□□□□ -1.47
TCF4-215ENST00000562638 TBC1D2Q9BYX2 928 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 PSD3Q9NYI0 1048 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 LCMT1Q9UIC8 334 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 AKAP2Q9Y2D5 859 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 SUGT1Q9Y2Z0 365 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 RRP15Q9Y3B9 282 aaKnown RBP5.88□□□□□ -1.47
TCF4-215ENST00000562638 RTEL1-TNFRSF6BF6WH68 1400 aa5.88□□□□□ -1.47
TCF4-215ENST00000562638 IPO5O00410 1097 aaKnown RBP5.87□□□□□ -1.47
TCF4-215ENST00000562638 RTN2O75298 545 aa5.87□□□□□ -1.47
TCF4-215ENST00000562638 PPFIA4O75335 1185 aa5.87□□□□□ -1.47
TCF4-215ENST00000562638 SMC2O95347 1197 aa5.87□□□□□ -1.47
TCF4-215ENST00000562638 TPM1P09493 284 aa5.87□□□□□ -1.47
TCF4-215ENST00000562638 PRPHP41219 470 aa5.87□□□□□ -1.47
TCF4-215ENST00000562638 EIF5P55010 431 aaKnown RBP5.87□□□□□ -1.47
TCF4-215ENST00000562638 RBM6P78332 1123 aaKnown RBP5.87□□□□□ -1.47
TCF4-215ENST00000562638 MCM6Q14566 821 aa5.87□□□□□ -1.47
TCF4-215ENST00000562638 KLHL40Q2TBA0 621 aa5.87□□□□□ -1.47
TCF4-215ENST00000562638 LONRF3Q496Y0 759 aa5.87□□□□□ -1.47
TCF4-215ENST00000562638 HSP90AB2PQ58FF8 381 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms