RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
USB1-206ENST00000562534 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
USB1-206ENST00000562534 TAF7Q15545 349 aaPredicted RBP21.49■■□□□ 1.03
USB1-206ENST00000562534 TXNRD1Q16881 649 aa21.49■■□□□ 1.03
USB1-206ENST00000562534 SLC27A3Q5K4L6 730 aa21.48■■□□□ 1.03
USB1-206ENST00000562534 PROM2Q8N271 834 aa21.48■■□□□ 1.03
USB1-206ENST00000562534 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
USB1-206ENST00000562534 TNS1Q9HBL0 1735 aaKnown RBP21.47■■□□□ 1.03
USB1-206ENST00000562534 NGEFQ8N5V2 710 aa21.47■■□□□ 1.03
USB1-206ENST00000562534 TRIM35Q9UPQ4 493 aa21.47■■□□□ 1.03
USB1-206ENST00000562534 ITGB4P16144 1822 aa21.47■■□□□ 1.03
USB1-206ENST00000562534 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
USB1-206ENST00000562534 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
USB1-206ENST00000562534 BTAF1O14981 1849 aa21.45■■□□□ 1.03
USB1-206ENST00000562534 ADAMTS7Q9UKP4 1686 aa21.45■■□□□ 1.02
USB1-206ENST00000562534 PALLDQ8WX93 1383 aa21.45■■□□□ 1.02
USB1-206ENST00000562534 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
USB1-206ENST00000562534 CCDC27Q2M243 656 aa21.44■■□□□ 1.02
USB1-206ENST00000562534 TTC5Q8N0Z6 440 aa21.44■■□□□ 1.02
USB1-206ENST00000562534 LOC102724428A0A0B4J2F2 783 aa21.43■■□□□ 1.02
USB1-206ENST00000562534 SIK1P57059 783 aa21.43■■□□□ 1.02
USB1-206ENST00000562534 ZNF790Q6PG37 636 aa21.43■■□□□ 1.02
USB1-206ENST00000562534 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
USB1-206ENST00000562534 THUMPD2Q9BTF0 503 aaKnown RBP21.43■■□□□ 1.02
USB1-206ENST00000562534 BABAM1Q9NWV8 329 aa21.43■■□□□ 1.02
USB1-206ENST00000562534 CCNL1Q9UK58 526 aaPredicted RBP21.43■■□□□ 1.02
USB1-206ENST00000562534 MRC1P22897 1456 aa21.42■■□□□ 1.02
USB1-206ENST00000562534 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
USB1-206ENST00000562534 NBPF14Q5TI25 921 aa21.42■■□□□ 1.02
USB1-206ENST00000562534 PTCD1O75127 700 aaKnown RBP21.41■■□□□ 1.02
USB1-206ENST00000562534 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
USB1-206ENST00000562534 ATP6V1AP38606 617 aa21.4■■□□□ 1.02
USB1-206ENST00000562534 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
USB1-206ENST00000562534 WWC1Q8IX03 1113 aa21.39■■□□□ 1.01
USB1-206ENST00000562534 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
USB1-206ENST00000562534 RGPD3A6NKT7 1758 aaPredicted RBP21.38■■□□□ 1.01
USB1-206ENST00000562534 RGPD4Q7Z3J3 1758 aa21.38■■□□□ 1.01
USB1-206ENST00000562534 MIS18AQ9NYP9 233 aa21.38■■□□□ 1.01
USB1-206ENST00000562534 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
USB1-206ENST00000562534 KCNQ4P56696 695 aa21.37■■□□□ 1.01
USB1-206ENST00000562534 FMNL2Q96PY5 1086 aa21.37■■□□□ 1.01
USB1-206ENST00000562534 SALL2Q9Y467 1007 aaPredicted RBP21.37■■□□□ 1.01
USB1-206ENST00000562534 CHL1O00533 1208 aa21.36■■□□□ 1.01
USB1-206ENST00000562534 WDR63Q8IWG1 891 aa21.36■■□□□ 1.01
USB1-206ENST00000562534 CFAP44Q96MT7 982 aa21.36■■□□□ 1.01
USB1-206ENST00000562534 TEX13AQ9BXU3 409 aaPredicted RBP21.36■■□□□ 1.01
USB1-206ENST00000562534 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
USB1-206ENST00000562534 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
USB1-206ENST00000562534 KCNQ3O43525 872 aa21.35■■□□□ 1.01
USB1-206ENST00000562534 ZNF496Q96IT1 587 aaPredicted RBP21.35■■□□□ 1.01
USB1-206ENST00000562534 SLC4A9Q96Q91 983 aa21.35■■□□□ 1.01
USB1-206ENST00000562534 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
USB1-206ENST00000562534 GNAI1P63096 354 aa21.34■■□□□ 1.01
USB1-206ENST00000562534 STK32BQ9NY57 414 aa21.34■■□□□ 1.01
USB1-206ENST00000562534 LY75O60449 1722 aa21.34■■□□□ 1.01
USB1-206ENST00000562534 ITPK1Q13572 414 aa21.33■■□□□ 1.01
USB1-206ENST00000562534 IFT57Q9NWB7 429 aa21.33■■□□□ 1.01
USB1-206ENST00000562534 ZNF853P0CG23 659 aa21.32■■□□□ 1
USB1-206ENST00000562534 SLC15A2Q16348 729 aa21.32■■□□□ 1
USB1-206ENST00000562534 SIPA1L3O60292 1781 aaPredicted RBP21.32■■□□□ 1
USB1-206ENST00000562534 IL16Q14005 1332 aa21.31■■□□□ 1
USB1-206ENST00000562534 SNRPA1P09661 255 aaKnown RBP21.31■■□□□ 1
USB1-206ENST00000562534 EIF4A1P60842 406 aaKnown RBP21.31■■□□□ 1
USB1-206ENST00000562534 RC3H1Q5TC82 1133 aaKnown RBP21.31■■□□□ 1
USB1-206ENST00000562534 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
USB1-206ENST00000562534 STARD3NLO95772 234 aa21.3■■□□□ 1
USB1-206ENST00000562534 AKT1S1Q96B36 256 aa21.3■■□□□ 1
USB1-206ENST00000562534 RREB1Q92766 1687 aa21.29■■□□□ 1
USB1-206ENST00000562534 DNAJC10Q8IXB1 793 aa21.29■■□□□ 1
USB1-206ENST00000562534 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
USB1-206ENST00000562534 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
USB1-206ENST00000562534 AK7Q96M32 723 aa21.28■■□□□ 1
USB1-206ENST00000562534 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
USB1-206ENST00000562534 CYP19A1P11511 503 aaPredicted RBP21.27■■□□□ 1
USB1-206ENST00000562534 MBIPQ9NS73 344 aa21.27■■□□□ 1
USB1-206ENST00000562534 KCPQ6ZWJ8 1503 aa21.27■■□□□ 1
USB1-206ENST00000562534 ZNF831Q5JPB2 1677 aa21.27■■□□□ 1
USB1-206ENST00000562534 PAPPAQ13219 1627 aa21.26■□□□□ 0.99
USB1-206ENST00000562534 FLAD1Q8NFF5 587 aa21.26■□□□□ 0.99
USB1-206ENST00000562534 ANO8Q9HCE9 1232 aaPredicted RBP21.26■□□□□ 0.99
USB1-206ENST00000562534 CNTNAP4Q9C0A0 1308 aa21.26■□□□□ 0.99
USB1-206ENST00000562534 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
USB1-206ENST00000562534 R3HDM1Q15032 1099 aaKnown RBP21.25■□□□□ 0.99
USB1-206ENST00000562534 ZNF827Q17R98 1081 aa21.25■□□□□ 0.99
USB1-206ENST00000562534 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
USB1-206ENST00000562534 NUP188Q5SRE5 1749 aa21.24■□□□□ 0.99
USB1-206ENST00000562534 RPS6KA4O75676 772 aa21.24■□□□□ 0.99
USB1-206ENST00000562534 CCDC87Q9NVE4 849 aa21.24■□□□□ 0.99
USB1-206ENST00000562534 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
USB1-206ENST00000562534 ZNF521Q96K83 1311 aa21.24■□□□□ 0.99
USB1-206ENST00000562534 GOLGA2Q08379 1002 aa21.23■□□□□ 0.99
USB1-206ENST00000562534 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
USB1-206ENST00000562534 MYH16Q9H6N6 1097 aa21.23■□□□□ 0.99
USB1-206ENST00000562534 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
USB1-206ENST00000562534 GNPATO15228 680 aa21.22■□□□□ 0.99
USB1-206ENST00000562534 HNRNPUQ00839 825 aaKnown RBP eCLIP21.22■□□□□ 0.99
USB1-206ENST00000562534 CHMP4AQ9BY43 222 aa21.22■□□□□ 0.99
USB1-206ENST00000562534 PRAMEF22A3QJZ6 481 aa21.21■□□□□ 0.99
USB1-206ENST00000562534 PSDA5PKW4 1024 aaPredicted RBP21.21■□□□□ 0.99
USB1-206ENST00000562534 HOXB7P09629 217 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms