RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 TMOD3Q9NYL9 352 aa29.48■■■□□ 2.31
SYNGR3-202ENST00000562045 RRP7AQ9Y3A4 280 aaKnown RBP29.48■■■□□ 2.31
SYNGR3-202ENST00000562045 MRC1P22897 1456 aa29.48■■■□□ 2.31
SYNGR3-202ENST00000562045 NFATC2IPQ8NCF5 419 aa29.48■■■□□ 2.31
SYNGR3-202ENST00000562045 LY75O60449 1722 aa29.47■■■□□ 2.31
SYNGR3-202ENST00000562045 SIPA1L3O60292 1781 aaPredicted RBP29.47■■■□□ 2.31
SYNGR3-202ENST00000562045 NEFMP07197 916 aa29.47■■■□□ 2.31
SYNGR3-202ENST00000562045 MCM10Q7L590 875 aa29.47■■■□□ 2.31
SYNGR3-202ENST00000562045 CABP4P57796 275 aa29.46■■■□□ 2.31
SYNGR3-202ENST00000562045 SALL2Q9Y467 1007 aaPredicted RBP29.46■■■□□ 2.31
SYNGR3-202ENST00000562045 NUP188Q5SRE5 1749 aa29.46■■■□□ 2.31
SYNGR3-202ENST00000562045 ASAP1Q9ULH1 1129 aa29.45■■■□□ 2.31
SYNGR3-202ENST00000562045 TMPOP42166 694 aaKnown RBP29.45■■■□□ 2.3
SYNGR3-202ENST00000562045 SLC52A2Q9HAB3 445 aa29.45■■■□□ 2.3
SYNGR3-202ENST00000562045 CEMIPQ8WUJ3 1361 aa29.44■■■□□ 2.3
SYNGR3-202ENST00000562045 KCNQ4P56696 695 aa29.42■■■□□ 2.3
SYNGR3-202ENST00000562045 NEUROD2Q15784 382 aa29.42■■■□□ 2.3
SYNGR3-202ENST00000562045 ATG3Q9NT62 314 aa29.42■■■□□ 2.3
SYNGR3-202ENST00000562045 THUMPD2Q9BTF0 503 aaKnown RBP29.42■■■□□ 2.3
SYNGR3-202ENST00000562045 RIPK4P57078 832 aa29.41■■■□□ 2.3
SYNGR3-202ENST00000562045 TXNRD1Q16881 649 aa29.41■■■□□ 2.3
SYNGR3-202ENST00000562045 NCBP3Q53F19 620 aaKnown RBP29.41■■■□□ 2.3
SYNGR3-202ENST00000562045 PAPPAQ13219 1627 aa29.41■■■□□ 2.3
SYNGR3-202ENST00000562045 PALLDQ8WX93 1383 aa29.4■■■□□ 2.3
SYNGR3-202ENST00000562045 RTF1Q92541 710 aaKnown RBP29.4■■■□□ 2.3
SYNGR3-202ENST00000562045 LRRC4BQ9NT99 713 aa29.4■■■□□ 2.3
SYNGR3-202ENST00000562045 HTATSF1O43719 755 aaKnown RBP29.37■■■□□ 2.29
SYNGR3-202ENST00000562045 SLC39A6Q13433 755 aa29.37■■■□□ 2.29
SYNGR3-202ENST00000562045 TRIM35Q9UPQ4 493 aa29.37■■■□□ 2.29
SYNGR3-202ENST00000562045 ZNF521Q96K83 1311 aa29.36■■■□□ 2.29
SYNGR3-202ENST00000562045 TEFQ10587 303 aa29.36■■■□□ 2.29
SYNGR3-202ENST00000562045 CCDC27Q2M243 656 aa29.34■■■□□ 2.29
SYNGR3-202ENST00000562045 TAF1LQ8IZX4 1826 aa29.33■■■□□ 2.29
SYNGR3-202ENST00000562045 SMARCC1Q92922 1105 aaPredicted RBP29.33■■■□□ 2.29
SYNGR3-202ENST00000562045 SLC4A9Q96Q91 983 aa29.33■■■□□ 2.29
SYNGR3-202ENST00000562045 UBR2Q8IWV8 1755 aa29.32■■■□□ 2.28
SYNGR3-202ENST00000562045 CCNL1Q9UK58 526 aaPredicted RBP29.31■■■□□ 2.28
SYNGR3-202ENST00000562045 WWC1Q8IX03 1113 aa29.31■■■□□ 2.28
SYNGR3-202ENST00000562045 ANO8Q9HCE9 1232 aaPredicted RBP29.31■■■□□ 2.28
SYNGR3-202ENST00000562045 KCPQ6ZWJ8 1503 aa29.3■■■□□ 2.28
SYNGR3-202ENST00000562045 C5P01031 1676 aa29.3■■■□□ 2.28
SYNGR3-202ENST00000562045 KCNQ3O43525 872 aa29.3■■■□□ 2.28
SYNGR3-202ENST00000562045 PTCD1O75127 700 aaKnown RBP29.3■■■□□ 2.28
SYNGR3-202ENST00000562045 MIS18AQ9NYP9 233 aa29.3■■■□□ 2.28
SYNGR3-202ENST00000562045 LOC102724428A0A0B4J2F2 783 aa29.29■■■□□ 2.28
SYNGR3-202ENST00000562045 SIK1P57059 783 aa29.29■■■□□ 2.28
SYNGR3-202ENST00000562045 GOLGA2Q08379 1002 aa29.28■■■□□ 2.28
SYNGR3-202ENST00000562045 RBM42Q9BTD8 480 aaKnown RBP29.28■■■□□ 2.28
SYNGR3-202ENST00000562045 SLC27A3Q5K4L6 730 aa29.28■■■□□ 2.28
SYNGR3-202ENST00000562045 BTBD11A6QL63 1104 aa29.27■■■□□ 2.28
SYNGR3-202ENST00000562045 ITPK1Q13572 414 aa29.27■■■□□ 2.28
SYNGR3-202ENST00000562045 TJP1Q07157 1748 aa29.27■■■□□ 2.28
SYNGR3-202ENST00000562045 KDM3BQ7LBC6 1761 aa29.26■■■□□ 2.28
SYNGR3-202ENST00000562045 ZNF831Q5JPB2 1677 aa29.25■■■□□ 2.27
SYNGR3-202ENST00000562045 LMOD3Q0VAK6 560 aa29.25■■■□□ 2.27
SYNGR3-202ENST00000562045 TAF7Q15545 349 aaPredicted RBP29.25■■■□□ 2.27
SYNGR3-202ENST00000562045 ZNF790Q6PG37 636 aa29.25■■■□□ 2.27
SYNGR3-202ENST00000562045 ATP6V1AP38606 617 aa29.24■■■□□ 2.27
SYNGR3-202ENST00000562045 WDR63Q8IWG1 891 aa29.24■■■□□ 2.27
SYNGR3-202ENST00000562045 COL5A3P25940 1745 aaPredicted RBP29.23■■■□□ 2.27
SYNGR3-202ENST00000562045 ZNF827Q17R98 1081 aa29.23■■■□□ 2.27
SYNGR3-202ENST00000562045 CDCA7LQ96GN5 454 aa29.23■■■□□ 2.27
SYNGR3-202ENST00000562045 TUBGCP6Q96RT7 1819 aa29.23■■■□□ 2.27
SYNGR3-202ENST00000562045 LINC00116Q8NCU8 138 aa29.22■■■□□ 2.27
SYNGR3-202ENST00000562045 ZNF496Q96IT1 587 aaPredicted RBP29.22■■■□□ 2.27
SYNGR3-202ENST00000562045 C4BP0C0L5 1744 aa29.22■■■□□ 2.27
SYNGR3-202ENST00000562045 CICQ96RK0 1608 aaPredicted RBP29.21■■■□□ 2.27
SYNGR3-202ENST00000562045 PSDA5PKW4 1024 aaPredicted RBP29.2■■■□□ 2.27
SYNGR3-202ENST00000562045 E9PSI1 815 aa29.2■■■□□ 2.26
SYNGR3-202ENST00000562045 TTC5Q8N0Z6 440 aa29.2■■■□□ 2.26
SYNGR3-202ENST00000562045 AKT1S1Q96B36 256 aa29.2■■■□□ 2.26
SYNGR3-202ENST00000562045 R3HDM1Q15032 1099 aaKnown RBP29.19■■■□□ 2.26
SYNGR3-202ENST00000562045 SLFN5Q08AF3 891 aa29.18■■■□□ 2.26
SYNGR3-202ENST00000562045 MYH14Q7Z406 1995 aaKnown RBP29.18■■■□□ 2.26
SYNGR3-202ENST00000562045 SLC15A2Q16348 729 aa29.17■■■□□ 2.26
SYNGR3-202ENST00000562045 NBPF14Q5TI25 921 aa29.17■■■□□ 2.26
SYNGR3-202ENST00000562045 DNAJC10Q8IXB1 793 aa29.17■■■□□ 2.26
SYNGR3-202ENST00000562045 AMIGO3Q86WK7 504 aa29.16■■■□□ 2.26
SYNGR3-202ENST00000562045 PRAMEF22A3QJZ6 481 aa29.15■■■□□ 2.26
SYNGR3-202ENST00000562045 SMIM5Q71RC9 77 aa29.15■■■□□ 2.26
SYNGR3-202ENST00000562045 LAS1LQ9Y4W2 734 aaKnown RBP29.15■■■□□ 2.26
SYNGR3-202ENST00000562045 HEG1Q9ULI3 1381 aa29.15■■■□□ 2.26
SYNGR3-202ENST00000562045 PDGFDQ9GZP0 370 aaPredicted RBP29.14■■■□□ 2.26
SYNGR3-202ENST00000562045 STK32BQ9NY57 414 aa29.14■■■□□ 2.26
SYNGR3-202ENST00000562045 IL16Q14005 1332 aa29.14■■■□□ 2.26
SYNGR3-202ENST00000562045 CALD1Q05682 793 aaKnown RBP29.14■■■□□ 2.25
SYNGR3-202ENST00000562045 DUSP27Q5VZP5 1158 aa29.14■■■□□ 2.25
SYNGR3-202ENST00000562045 TRMT2AQ8IZ69 625 aaKnown RBP29.14■■■□□ 2.25
SYNGR3-202ENST00000562045 TSPYL4Q9UJ04 414 aa29.14■■■□□ 2.25
SYNGR3-202ENST00000562045 UBR3Q6ZT12 1888 aa29.14■■■□□ 2.25
SYNGR3-202ENST00000562045 FMNL2Q96PY5 1086 aa29.13■■■□□ 2.25
SYNGR3-202ENST00000562045 SPINK5Q9NQ38 1064 aaPredicted RBP29.13■■■□□ 2.25
SYNGR3-202ENST00000562045 CHL1O00533 1208 aa29.12■■■□□ 2.25
SYNGR3-202ENST00000562045 ZNF853P0CG23 659 aa29.11■■■□□ 2.25
SYNGR3-202ENST00000562045 EIF4A1P60842 406 aaKnown RBP29.11■■■□□ 2.25
SYNGR3-202ENST00000562045 VSIG10Q8N0Z9 540 aa29.11■■■□□ 2.25
SYNGR3-202ENST00000562045 MYH16Q9H6N6 1097 aa29.11■■■□□ 2.25
SYNGR3-202ENST00000562045 QSER1Q2KHR3 1735 aa29.1■■■□□ 2.25
SYNGR3-202ENST00000562045 CFAP44Q96MT7 982 aa29.09■■■□□ 2.25
SYNGR3-202ENST00000562045 CASZ1Q86V15 1759 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms