RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PHKG2P15735 406 aa34.51■■■■□ 3.12
NME3-202ENST00000561637 PIGBQ92521 554 aa34.51■■■■□ 3.12
NME3-202ENST00000561637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.5■■■■□ 3.11
NME3-202ENST00000561637 SMARCC1Q92922 1105 aaPredicted RBP34.5■■■■□ 3.11
NME3-202ENST00000561637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.5■■■■□ 3.11
NME3-202ENST00000561637 HMGB2P26583 209 aaKnown RBP34.49■■■■□ 3.11
NME3-202ENST00000561637 CC2D1BQ5T0F9 858 aaKnown RBP34.49■■■■□ 3.11
NME3-202ENST00000561637 CNGB1Q14028 1251 aaPredicted RBP34.47■■■■□ 3.11
NME3-202ENST00000561637 IFNL2Q8IZJ0 200 aa34.46■■■■□ 3.11
NME3-202ENST00000561637 LINC00116Q8NCU8 138 aa34.46■■■■□ 3.11
NME3-202ENST00000561637 KIF3CO14782 793 aa34.44■■■■□ 3.1
NME3-202ENST00000561637 IL13P35225 146 aa34.44■■■■□ 3.1
NME3-202ENST00000561637 SSFA2P28290 1259 aa34.42■■■■□ 3.1
NME3-202ENST00000561637 MTHFSP49914 203 aa34.42■■■■□ 3.1
NME3-202ENST00000561637 KIAA1551Q9HCM1 1747 aa34.41■■■■□ 3.1
NME3-202ENST00000561637 LOC102724428A0A0B4J2F2 783 aa34.41■■■■□ 3.1
NME3-202ENST00000561637 SIK1P57059 783 aa34.41■■■■□ 3.1
NME3-202ENST00000561637 SULT6B1Q6IMI4 303 aa34.4■■■■□ 3.1
NME3-202ENST00000561637 ASAP1Q9ULH1 1129 aa34.4■■■■□ 3.1
NME3-202ENST00000561637 N4BP2Q86UW6 1770 aaPredicted RBP34.4■■■■□ 3.1
NME3-202ENST00000561637 CICQ96RK0 1608 aaPredicted RBP34.4■■■■□ 3.1
NME3-202ENST00000561637 KIF13BQ9NQT8 1826 aa34.39■■■■□ 3.1
NME3-202ENST00000561637 ZNF530Q6P9A1 599 aaPredicted RBP34.39■■■■□ 3.1
NME3-202ENST00000561637 TMOD3Q9NYL9 352 aa34.39■■■■□ 3.1
NME3-202ENST00000561637 ITPK1Q13572 414 aa34.38■■■■□ 3.09
NME3-202ENST00000561637 KDM6AO15550 1401 aaPredicted RBP34.38■■■■□ 3.09
NME3-202ENST00000561637 PLEKHO1Q53GL0 409 aaPredicted RBP34.36■■■■□ 3.09
NME3-202ENST00000561637 PLEKHG2Q9H7P9 1386 aa34.36■■■■□ 3.09
NME3-202ENST00000561637 GNPATO15228 680 aa34.35■■■■□ 3.09
NME3-202ENST00000561637 KDRP35968 1356 aa34.35■■■■□ 3.09
NME3-202ENST00000561637 ATG3Q9NT62 314 aa34.34■■■■□ 3.09
NME3-202ENST00000561637 PXDNLA1KZ92 1463 aa34.33■■■■□ 3.09
NME3-202ENST00000561637 MMP10P09238 476 aa34.31■■■■□ 3.08
NME3-202ENST00000561637 ATP6V1AP38606 617 aa34.31■■■■□ 3.08
NME3-202ENST00000561637 HMOX1P09601 288 aa34.3■■■■□ 3.08
NME3-202ENST00000561637 NPC1L1Q9UHC9 1359 aa34.29■■■■□ 3.08
NME3-202ENST00000561637 AMOTQ4VCS5 1084 aa34.29■■■■□ 3.08
NME3-202ENST00000561637 DCAF5Q96JK2 942 aa34.28■■■■□ 3.08
NME3-202ENST00000561637 COL3A1P02461 1466 aaPredicted RBP34.27■■■■□ 3.08
NME3-202ENST00000561637 SLC4A9Q96Q91 983 aa34.26■■■■□ 3.08
NME3-202ENST00000561637 BRCA1P38398 1863 aaKnown RBP34.26■■■■□ 3.07
NME3-202ENST00000561637 A0A0G2JLW4 131 aa34.25■■■■□ 3.07
NME3-202ENST00000561637 ERVV-2B6SEH9 535 aa34.25■■■■□ 3.07
NME3-202ENST00000561637 BCS1LQ9Y276 419 aa34.25■■■■□ 3.07
NME3-202ENST00000561637 HSP90AB1P08238 724 aaKnown RBP34.24■■■■□ 3.07
NME3-202ENST00000561637 APLP1P51693 650 aa34.23■■■■□ 3.07
NME3-202ENST00000561637 C1orf141Q5JVX7 400 aa34.23■■■■□ 3.07
NME3-202ENST00000561637 DNAJC5GQ8N7S2 189 aa34.23■■■■□ 3.07
NME3-202ENST00000561637 DIAPH1O60610 1272 aaKnown RBP34.22■■■■□ 3.07
NME3-202ENST00000561637 TOMM70O94826 608 aa34.21■■■■□ 3.07
NME3-202ENST00000561637 CABP4P57796 275 aa34.21■■■■□ 3.07
NME3-202ENST00000561637 TGFB2P61812 414 aa34.21■■■■□ 3.07
NME3-202ENST00000561637 COL5A3P25940 1745 aaPredicted RBP34.21■■■■□ 3.07
NME3-202ENST00000561637 C10orf71Q711Q0 1435 aa34.21■■■■□ 3.07
NME3-202ENST00000561637 C4AP0C0L4 1744 aa34.19■■■■□ 3.06
NME3-202ENST00000561637 TRAPPC3LQ5T215 181 aa34.19■■■■□ 3.06
NME3-202ENST00000561637 ARHGAP27Q6ZUM4 889 aa34.19■■■■□ 3.06
NME3-202ENST00000561637 RBM42Q9BTD8 480 aaKnown RBP34.19■■■■□ 3.06
NME3-202ENST00000561637 NMRK2Q9NPI5 230 aa34.19■■■■□ 3.06
NME3-202ENST00000561637 MYH14Q7Z406 1995 aaKnown RBP34.18■■■■□ 3.06
NME3-202ENST00000561637 RTCBQ9Y3I0 505 aaKnown RBP34.18■■■■□ 3.06
NME3-202ENST00000561637 ZNF831Q5JPB2 1677 aa34.18■■■■□ 3.06
NME3-202ENST00000561637 DPEP1P16444 411 aa34.17■■■■□ 3.06
NME3-202ENST00000561637 NLGN1Q8N2Q7 840 aa34.16■■■■□ 3.06
NME3-202ENST00000561637 NFATC2IPQ8NCF5 419 aa34.16■■■■□ 3.06
NME3-202ENST00000561637 ARHGEF1Q92888 912 aaKnown RBP34.16■■■■□ 3.06
NME3-202ENST00000561637 SCN11AQ9UI33 1791 aa34.16■■■■□ 3.06
NME3-202ENST00000561637 WDR90Q96KV7 1748 aa34.16■■■■□ 3.06
NME3-202ENST00000561637 LGR6Q9HBX8 967 aa34.15■■■■□ 3.06
NME3-202ENST00000561637 ARFGEF1Q9Y6D6 1849 aa34.15■■■■□ 3.06
NME3-202ENST00000561637 MTHFSDQ2M296 383 aaKnown RBP34.14■■■■□ 3.06
NME3-202ENST00000561637 FCHSD2O94868 740 aa34.13■■■■□ 3.05
NME3-202ENST00000561637 GYS1P13807 737 aa34.13■■■■□ 3.05
NME3-202ENST00000561637 AKAP4Q5JQC9 854 aa34.13■■■■□ 3.05
NME3-202ENST00000561637 U2SURPO15042 1029 aaKnown RBP34.12■■■■□ 3.05
NME3-202ENST00000561637 PTCD1O75127 700 aaKnown RBP34.11■■■■□ 3.05
NME3-202ENST00000561637 CCDC87Q9NVE4 849 aa34.11■■■■□ 3.05
NME3-202ENST00000561637 KCNA3P22001 575 aa34.1■■■■□ 3.05
NME3-202ENST00000561637 RC3H1Q5TC82 1133 aaKnown RBP34.09■■■■□ 3.05
NME3-202ENST00000561637 RNMTO43148 476 aaKnown RBP34.07■■■■□ 3.04
NME3-202ENST00000561637 ADRA2BP18089 450 aa34.07■■■■□ 3.04
NME3-202ENST00000561637 PARP3Q9Y6F1 533 aa34.07■■■■□ 3.04
NME3-202ENST00000561637 VIRMAQ69YN4 1812 aaKnown RBP34.07■■■■□ 3.04
NME3-202ENST00000561637 CNTNAP4Q9C0A0 1308 aa34.06■■■■□ 3.04
NME3-202ENST00000561637 RPS6KA4O75676 772 aa34.06■■■■□ 3.04
NME3-202ENST00000561637 RFC4P35249 363 aa34.06■■■■□ 3.04
NME3-202ENST00000561637 HTRA3P83110 453 aa34.06■■■■□ 3.04
NME3-202ENST00000561637 C9orf131Q5VYM1 1079 aa34.06■■■■□ 3.04
NME3-202ENST00000561637 MRC1P22897 1456 aa34.06■■■■□ 3.04
NME3-202ENST00000561637 PPP2R1AP30153 589 aa34.05■■■■□ 3.04
NME3-202ENST00000561637 SLC52A2Q9HAB3 445 aa34.05■■■■□ 3.04
NME3-202ENST00000561637 TJP1Q07157 1748 aa34.04■■■■□ 3.04
NME3-202ENST00000561637 SBF1O95248 1867 aa34.03■■■■□ 3.04
NME3-202ENST00000561637 ADAMTS7Q9UKP4 1686 aa34.03■■■■□ 3.04
NME3-202ENST00000561637 SLC39A6Q13433 755 aa34.03■■■■□ 3.04
NME3-202ENST00000561637 RBM46Q8TBY0 533 aaKnown RBP34.03■■■■□ 3.04
NME3-202ENST00000561637 KCPQ6ZWJ8 1503 aa34■■■■□ 3.03
NME3-202ENST00000561637 SRP68Q9UHB9 627 aaKnown RBP33.99■■■■□ 3.03
NME3-202ENST00000561637 PIM2Q9P1W9 311 aa33.98■■■■□ 3.03
NME3-202ENST00000561637 CRKLP46109 303 aaKnown RBP33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms