RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SIX5Q8N196 739 aa9.34□□□□□ -0.91
USP8-218ENST00000561330 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
USP8-218ENST00000561330 ARID3AQ99856 593 aa9.34□□□□□ -0.91
USP8-218ENST00000561330 SERTAD1Q9UHV2 236 aa9.34□□□□□ -0.91
USP8-218ENST00000561330 HRH3Q9Y5N1 445 aa9.34□□□□□ -0.91
USP8-218ENST00000561330 SOBPA7XYQ1 873 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L10C9JJH3 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L21D6R901 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 BACH1O14867 736 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 USP17L24Q0WX57 530 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 PTK7Q13308 1070 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 TLR1Q15399 786 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
USP8-218ENST00000561330 ZNF358Q9NW07 568 aa9.33□□□□□ -0.92
USP8-218ENST00000561330 GTF2E1P29083 439 aaPredicted RBP9.32□□□□□ -0.92
USP8-218ENST00000561330 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
USP8-218ENST00000561330 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
USP8-218ENST00000561330 SLC4A9Q96Q91 983 aa9.32□□□□□ -0.92
USP8-218ENST00000561330 ZSCAN10Q96SZ4 725 aaPredicted RBP9.32□□□□□ -0.92
USP8-218ENST00000561330 GRIP2Q9C0E4 1043 aa9.32□□□□□ -0.92
USP8-218ENST00000561330 SMTNP53814 917 aa9.31□□□□□ -0.92
USP8-218ENST00000561330 PRICKLE2Q7Z3G6 844 aa9.31□□□□□ -0.92
USP8-218ENST00000561330 ANKMY2Q8IV38 441 aa9.31□□□□□ -0.92
USP8-218ENST00000561330 FHDC1Q9C0D6 1143 aaPredicted RBP9.31□□□□□ -0.92
USP8-218ENST00000561330 DKK1O94907 266 aa9.3□□□□□ -0.92
USP8-218ENST00000561330 SEC13P55735 322 aa9.3□□□□□ -0.92
USP8-218ENST00000561330 DPYDQ12882 1025 aa9.3□□□□□ -0.92
USP8-218ENST00000561330 A6NJY4 79 aa9.29□□□□□ -0.92
USP8-218ENST00000561330 SFI1A8K8P3 1242 aa9.29□□□□□ -0.92
USP8-218ENST00000561330 PPP1R15AO75807 674 aaPredicted RBP9.29□□□□□ -0.92
USP8-218ENST00000561330 GNASQ5JWF2 1037 aa9.29□□□□□ -0.92
USP8-218ENST00000561330 TMEM214Q6NUQ4 689 aaKnown RBP9.29□□□□□ -0.92
USP8-218ENST00000561330 ATG7O95352 703 aa9.28□□□□□ -0.92
USP8-218ENST00000561330 POU4F2Q12837 409 aa9.28□□□□□ -0.92
USP8-218ENST00000561330 PPARGC1BQ86YN6 1023 aaKnown RBP9.28□□□□□ -0.92
USP8-218ENST00000561330 FAM200AQ8TCP9 573 aa9.28□□□□□ -0.92
USP8-218ENST00000561330 NOVA2Q9UNW9 492 aaKnown RBP9.28□□□□□ -0.92
USP8-218ENST00000561330 SPATA31C2B4DYI2 1134 aa9.27□□□□□ -0.93
USP8-218ENST00000561330 M0R2N6 131 aa9.27□□□□□ -0.93
USP8-218ENST00000561330 RHOQP17081 205 aa9.27□□□□□ -0.93
USP8-218ENST00000561330 MTFR1Q15390 333 aa9.27□□□□□ -0.93
USP8-218ENST00000561330 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.93
USP8-218ENST00000561330 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
USP8-218ENST00000561330 CDK2AP1O14519 115 aa9.26□□□□□ -0.93
USP8-218ENST00000561330 PTSQ03393 145 aa9.26□□□□□ -0.93
USP8-218ENST00000561330 ELOAQ14241 798 aaKnown RBP9.26□□□□□ -0.93
USP8-218ENST00000561330 NBPF10Q6P3W6 841 aaKnown RBP9.26□□□□□ -0.93
USP8-218ENST00000561330 NBPF15Q8N660 670 aa9.26□□□□□ -0.93
USP8-218ENST00000561330 TSEN2Q8NCE0 465 aaKnown RBP9.26□□□□□ -0.93
USP8-218ENST00000561330 ARXQ96QS3 562 aa9.26□□□□□ -0.93
USP8-218ENST00000561330 WDR44Q5JSH3 913 aa9.25□□□□□ -0.93
USP8-218ENST00000561330 RHBDD1Q8TEB9 315 aa9.25□□□□□ -0.93
USP8-218ENST00000561330 SCHIP1Q9P0W5 487 aaPredicted RBP9.25□□□□□ -0.93
USP8-218ENST00000561330 ACIN1Q9UKV3 1341 aaKnown RBP9.25□□□□□ -0.93
USP8-218ENST00000561330 EPHA4P54764 986 aa9.24□□□□□ -0.93
USP8-218ENST00000561330 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
USP8-218ENST00000561330 NIFKQ9BYG3 293 aaKnown RBP9.24□□□□□ -0.93
USP8-218ENST00000561330 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
USP8-218ENST00000561330 PHKA2P46019 1235 aa9.23□□□□□ -0.93
USP8-218ENST00000561330 C4orf17Q53FE4 359 aa9.23□□□□□ -0.93
USP8-218ENST00000561330 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
USP8-218ENST00000561330 TIMMDC1Q9NPL8 285 aa9.23□□□□□ -0.93
USP8-218ENST00000561330 ZMIZ1Q9ULJ6 1067 aa9.23□□□□□ -0.93
USP8-218ENST00000561330 SLC35F4A4IF30 521 aa9.22□□□□□ -0.93
USP8-218ENST00000561330 FOXK2Q01167 660 aa9.22□□□□□ -0.93
USP8-218ENST00000561330 STK32AQ8WU08 396 aa9.22□□□□□ -0.93
USP8-218ENST00000561330 USP3Q9Y6I4 520 aa9.22□□□□□ -0.93
USP8-218ENST00000561330 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.94
USP8-218ENST00000561330 CCDC155Q8N6L0 562 aa9.21□□□□□ -0.94
USP8-218ENST00000561330 TSPAN10Q9H1Z9 355 aaPredicted RBP9.21□□□□□ -0.94
USP8-218ENST00000561330 CABP1Q9NZU7 370 aa9.21□□□□□ -0.94
USP8-218ENST00000561330 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
USP8-218ENST00000561330 PLA2G4AP47712 749 aa9.2□□□□□ -0.94
USP8-218ENST00000561330 TBCELQ5QJ74 424 aa9.2□□□□□ -0.94
USP8-218ENST00000561330 DYRK1BQ9Y463 629 aa9.2□□□□□ -0.94
USP8-218ENST00000561330 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
USP8-218ENST00000561330 LGR5O75473 907 aa9.19□□□□□ -0.94
USP8-218ENST00000561330 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
USP8-218ENST00000561330 TMEM164Q5U3C3 297 aa9.19□□□□□ -0.94
USP8-218ENST00000561330 NPAS3Q8IXF0 933 aa9.19□□□□□ -0.94
USP8-218ENST00000561330 ZNF295-AS1Q8N0V1 137 aa9.19□□□□□ -0.94
USP8-218ENST00000561330 A0A1B0GTH6 734 aa9.18□□□□□ -0.94
USP8-218ENST00000561330 TERTO14746 1132 aaKnown RBP9.18□□□□□ -0.94
USP8-218ENST00000561330 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
USP8-218ENST00000561330 CSB-PGBD3P0DP91 1061 aa9.18□□□□□ -0.94
USP8-218ENST00000561330 PSMA6P60900 246 aaKnown RBP9.18□□□□□ -0.94
USP8-218ENST00000561330 ATAD2Q6PL18 1390 aa9.18□□□□□ -0.94
USP8-218ENST00000561330 GAS2L2Q8NHY3 880 aa9.18□□□□□ -0.94
USP8-218ENST00000561330 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
USP8-218ENST00000561330 GAS2L1Q99501 681 aaPredicted RBP9.18□□□□□ -0.94
USP8-218ENST00000561330 ZNF232Q9UNY5 417 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms