RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
MARK3-225ENST00000561225 COL24A1Q17RW2 1714 aa11.35□□□□□ -0.59
MARK3-225ENST00000561225 GRIN3BO60391 1043 aa11.35□□□□□ -0.59
MARK3-225ENST00000561225 HSPA6P17066 643 aa11.35□□□□□ -0.59
MARK3-225ENST00000561225 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
MARK3-225ENST00000561225 RAB3GAP2Q9H2M9 1393 aa11.34□□□□□ -0.59
MARK3-225ENST00000561225 SOX12O15370 315 aa11.34□□□□□ -0.59
MARK3-225ENST00000561225 BTAF1O14981 1849 aa11.34□□□□□ -0.59
MARK3-225ENST00000561225 CENPJQ9HC77 1338 aaPredicted RBP11.34□□□□□ -0.59
MARK3-225ENST00000561225 RGPD5Q99666 1765 aa11.33□□□□□ -0.59
MARK3-225ENST00000561225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
MARK3-225ENST00000561225 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
MARK3-225ENST00000561225 SLC27A3Q5K4L6 730 aa11.33□□□□□ -0.6
MARK3-225ENST00000561225 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
MARK3-225ENST00000561225 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
MARK3-225ENST00000561225 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
MARK3-225ENST00000561225 NFAT5O94916 1531 aa11.33□□□□□ -0.6
MARK3-225ENST00000561225 TTC21BQ7Z4L5 1316 aa11.33□□□□□ -0.6
MARK3-225ENST00000561225 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
MARK3-225ENST00000561225 TFCP2L1Q9NZI6 479 aa11.32□□□□□ -0.6
MARK3-225ENST00000561225 QRICH2Q9H0J4 1663 aa11.32□□□□□ -0.6
MARK3-225ENST00000561225 ERBB3P21860 1342 aa11.32□□□□□ -0.6
MARK3-225ENST00000561225 ADCY9O60503 1353 aa11.31□□□□□ -0.6
MARK3-225ENST00000561225 HOXB3P14651 431 aaPredicted RBP11.31□□□□□ -0.6
MARK3-225ENST00000561225 IL2RBP14784 551 aa11.31□□□□□ -0.6
MARK3-225ENST00000561225 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
MARK3-225ENST00000561225 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
MARK3-225ENST00000561225 KIAA1210Q9ULL0 1709 aa11.31□□□□□ -0.6
MARK3-225ENST00000561225 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
MARK3-225ENST00000561225 KCNQ4P56696 695 aa11.3□□□□□ -0.6
MARK3-225ENST00000561225 NLRP2Q9NX02 1062 aa11.3□□□□□ -0.6
MARK3-225ENST00000561225 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
MARK3-225ENST00000561225 ZNF526Q8TF50 670 aaPredicted RBP11.29□□□□□ -0.6
MARK3-225ENST00000561225 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
MARK3-225ENST00000561225 TTC21AQ8NDW8 1320 aa11.29□□□□□ -0.6
MARK3-225ENST00000561225 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
MARK3-225ENST00000561225 STK25O00506 426 aa11.28□□□□□ -0.6
MARK3-225ENST00000561225 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
MARK3-225ENST00000561225 COL23A1Q86Y22 540 aaPredicted RBP11.26□□□□□ -0.61
MARK3-225ENST00000561225 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
MARK3-225ENST00000561225 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
MARK3-225ENST00000561225 PCNTO95613 3336 aa11.25□□□□□ -0.61
MARK3-225ENST00000561225 KIF3CO14782 793 aa11.25□□□□□ -0.61
MARK3-225ENST00000561225 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
MARK3-225ENST00000561225 MSL1Q68DK7 614 aa11.25□□□□□ -0.61
MARK3-225ENST00000561225 DDX54Q8TDD1 881 aaKnown RBP11.25□□□□□ -0.61
MARK3-225ENST00000561225 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
MARK3-225ENST00000561225 CD2APQ9Y5K6 639 aa11.25□□□□□ -0.61
MARK3-225ENST00000561225 NSD2O96028 1365 aa11.25□□□□□ -0.61
MARK3-225ENST00000561225 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
MARK3-225ENST00000561225 SYTL4Q96C24 671 aaPredicted RBP11.24□□□□□ -0.61
MARK3-225ENST00000561225 CCNL1Q9UK58 526 aaPredicted RBP11.24□□□□□ -0.61
MARK3-225ENST00000561225 USP31Q70CQ4 1352 aa11.24□□□□□ -0.61
MARK3-225ENST00000561225 KTN1Q86UP2 1357 aaKnown RBP11.24□□□□□ -0.61
MARK3-225ENST00000561225 ANKRD36BQ8N2N9 1353 aa11.24□□□□□ -0.61
MARK3-225ENST00000561225 RGL2O15211 777 aa11.23□□□□□ -0.61
MARK3-225ENST00000561225 DNAJC5GQ8N7S2 189 aa11.23□□□□□ -0.61
MARK3-225ENST00000561225 LY75O60449 1722 aa11.23□□□□□ -0.61
MARK3-225ENST00000561225 KAT6BQ8WYB5 2073 aa11.23□□□□□ -0.61
MARK3-225ENST00000561225 APLP1P51693 650 aa11.22□□□□□ -0.61
MARK3-225ENST00000561225 NME9Q86XW9 330 aa11.21□□□□□ -0.61
MARK3-225ENST00000561225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.21□□□□□ -0.616e-6■□□□□ 8.8
MARK3-225ENST00000561225 USP54Q70EL1 1684 aa11.2□□□□□ -0.62
MARK3-225ENST00000561225 LTN1O94822 1766 aa11.2□□□□□ -0.62
MARK3-225ENST00000561225 DOT1LQ8TEK3 1739 aa11.2□□□□□ -0.62
MARK3-225ENST00000561225 SBNO2Q9Y2G9 1366 aa11.19□□□□□ -0.62
MARK3-225ENST00000561225 IGSF1Q8N6C5 1336 aa11.19□□□□□ -0.62
MARK3-225ENST00000561225 MON2Q7Z3U7 1717 aa11.19□□□□□ -0.62
MARK3-225ENST00000561225 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
MARK3-225ENST00000561225 WWC3Q9ULE0 1092 aa11.19□□□□□ -0.62
MARK3-225ENST00000561225 USP47Q96K76 1375 aa11.18□□□□□ -0.62
MARK3-225ENST00000561225 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
MARK3-225ENST00000561225 COL13A1Q5TAT6 717 aaPredicted RBP11.18□□□□□ -0.62
MARK3-225ENST00000561225 CD163L1Q9NR16 1453 aa11.18□□□□□ -0.62
MARK3-225ENST00000561225 TOMM70O94826 608 aa11.17□□□□□ -0.62
MARK3-225ENST00000561225 FLAD1Q8NFF5 587 aa11.17□□□□□ -0.62
MARK3-225ENST00000561225 ZCRB1Q8TBF4 217 aaKnown RBP11.17□□□□□ -0.62
MARK3-225ENST00000561225 IP6K1Q92551 441 aa11.17□□□□□ -0.62
MARK3-225ENST00000561225 LTV1Q96GA3 475 aaPredicted RBP11.17□□□□□ -0.62
MARK3-225ENST00000561225 MEGF6O75095 1541 aa11.15□□□□□ -0.62
MARK3-225ENST00000561225 C5P01031 1676 aa11.15□□□□□ -0.62
MARK3-225ENST00000561225 AMIGO3Q86WK7 504 aa11.15□□□□□ -0.62
MARK3-225ENST00000561225 CICQ96RK0 1608 aaPredicted RBP11.15□□□□□ -0.62
MARK3-225ENST00000561225 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
MARK3-225ENST00000561225 EDC4Q6P2E9 1401 aaKnown RBP11.13□□□□□ -0.63
MARK3-225ENST00000561225 ZNF687Q8N1G0 1237 aa11.13□□□□□ -0.63
MARK3-225ENST00000561225 JMYQ8N9B5 988 aa11.13□□□□□ -0.63
MARK3-225ENST00000561225 KLRG1Q96E93 195 aa11.13□□□□□ -0.63
MARK3-225ENST00000561225 PALLDQ8WX93 1383 aa11.13□□□□□ -0.63
MARK3-225ENST00000561225 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
MARK3-225ENST00000561225 HOXC9P31274 260 aa11.12□□□□□ -0.63
MARK3-225ENST00000561225 PRELPP51888 382 aa11.12□□□□□ -0.63
MARK3-225ENST00000561225 HTRA3P83110 453 aa11.12□□□□□ -0.63
MARK3-225ENST00000561225 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
MARK3-225ENST00000561225 NMRK2Q9NPI5 230 aa11.12□□□□□ -0.63
MARK3-225ENST00000561225 ROCK2O75116 1388 aaKnown RBP11.12□□□□□ -0.63
MARK3-225ENST00000561225 WDR90Q96KV7 1748 aa11.12□□□□□ -0.63
MARK3-225ENST00000561225 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
MARK3-225ENST00000561225 MAP3K19Q56UN5 1328 aa11.11□□□□□ -0.63
MARK3-225ENST00000561225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms