RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
SNRPA1-214ENST00000560987 ASAP1Q9ULH1 1129 aa11.99□□□□□ -0.49
SNRPA1-214ENST00000560987 NHSQ6T4R5 1651 aa11.99□□□□□ -0.49
SNRPA1-214ENST00000560987 SHANK3Q9BYB0 1731 aa11.99□□□□□ -0.49
SNRPA1-214ENST00000560987 BTAF1O14981 1849 aa11.99□□□□□ -0.49
SNRPA1-214ENST00000560987 PKD1L3Q7Z443 1732 aa11.98□□□□□ -0.49
SNRPA1-214ENST00000560987 DOT1LQ8TEK3 1739 aa11.98□□□□□ -0.49
SNRPA1-214ENST00000560987 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
SNRPA1-214ENST00000560987 RNMTO43148 476 aaKnown RBP11.98□□□□□ -0.49
SNRPA1-214ENST00000560987 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
SNRPA1-214ENST00000560987 WDR43Q15061 677 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNRPA1-214ENST00000560987 RTF1Q92541 710 aaKnown RBP11.98□□□□□ -0.49
SNRPA1-214ENST00000560987 LRRC4BQ9NT99 713 aa11.98□□□□□ -0.49
SNRPA1-214ENST00000560987 LRP5O75197 1615 aa11.97□□□□□ -0.49
SNRPA1-214ENST00000560987 COL3A1P02461 1466 aaPredicted RBP11.97□□□□□ -0.49
SNRPA1-214ENST00000560987 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
SNRPA1-214ENST00000560987 SLC15A2Q16348 729 aa11.97□□□□□ -0.49
SNRPA1-214ENST00000560987 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
SNRPA1-214ENST00000560987 PALLDQ8WX93 1383 aa11.96□□□□□ -0.49
SNRPA1-214ENST00000560987 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
SNRPA1-214ENST00000560987 PTCD1O75127 700 aaKnown RBP11.96□□□□□ -0.49
SNRPA1-214ENST00000560987 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
SNRPA1-214ENST00000560987 TEFQ10587 303 aa11.96□□□□□ -0.49
SNRPA1-214ENST00000560987 ATG3Q9NT62 314 aa11.96□□□□□ -0.49
SNRPA1-214ENST00000560987 ITGB4P16144 1822 aa11.95□□□□□ -0.5
SNRPA1-214ENST00000560987 LOC102724428A0A0B4J2F2 783 aa11.95□□□□□ -0.5
SNRPA1-214ENST00000560987 SIK1P57059 783 aa11.95□□□□□ -0.5
SNRPA1-214ENST00000560987 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
SNRPA1-214ENST00000560987 IL17REQ8NFR9 667 aa11.94□□□□□ -0.5
SNRPA1-214ENST00000560987 SLC52A2Q9HAB3 445 aa11.94□□□□□ -0.5
SNRPA1-214ENST00000560987 HAX1O00165 279 aa11.93□□□□□ -0.5
SNRPA1-214ENST00000560987 SLC39A6Q13433 755 aa11.93□□□□□ -0.5
SNRPA1-214ENST00000560987 KDM6AO15550 1401 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-214ENST00000560987 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 NUP188Q5SRE5 1749 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 RREB1Q92766 1687 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 ZNF827Q17R98 1081 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 MCM10Q7L590 875 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 CCDC146Q8IYE0 955 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 AK7Q96M32 723 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 ADAMTS8Q9UP79 889 aa11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-214ENST00000560987 BTBD11A6QL63 1104 aa11.91□□□□□ -0.5
SNRPA1-214ENST00000560987 ZBTB7AO95365 584 aa11.91□□□□□ -0.5
SNRPA1-214ENST00000560987 POLA2Q14181 598 aa11.91□□□□□ -0.5
SNRPA1-214ENST00000560987 NFE2L2Q16236 605 aa11.91□□□□□ -0.5
SNRPA1-214ENST00000560987 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
SNRPA1-214ENST00000560987 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
SNRPA1-214ENST00000560987 PLEKHF1Q96S99 279 aa11.91□□□□□ -0.5
SNRPA1-214ENST00000560987 PDGFDQ9GZP0 370 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-214ENST00000560987 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-214ENST00000560987 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.5
SNRPA1-214ENST00000560987 HTATSF1O43719 755 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-214ENST00000560987 RIPK4P57078 832 aa11.9□□□□□ -0.5
SNRPA1-214ENST00000560987 MTFR1LQ9H019 292 aa11.9□□□□□ -0.5
SNRPA1-214ENST00000560987 TOGARAM1Q9Y4F4 1720 aa11.9□□□□□ -0.5
SNRPA1-214ENST00000560987 PHF14O94880 888 aa11.89□□□□□ -0.51
SNRPA1-214ENST00000560987 ITPK1Q13572 414 aa11.89□□□□□ -0.51
SNRPA1-214ENST00000560987 LINC00116Q8NCU8 138 aa11.89□□□□□ -0.51
SNRPA1-214ENST00000560987 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
SNRPA1-214ENST00000560987 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
SNRPA1-214ENST00000560987 SCN11AQ9UI33 1791 aa11.88□□□□□ -0.51
SNRPA1-214ENST00000560987 GNPATO15228 680 aa11.88□□□□□ -0.51
SNRPA1-214ENST00000560987 TAF7Q15545 349 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-214ENST00000560987 CCDC184Q52MB2 194 aa11.88□□□□□ -0.51
SNRPA1-214ENST00000560987 SMIM5Q71RC9 77 aa11.88□□□□□ -0.51
SNRPA1-214ENST00000560987 FLAD1Q8NFF5 587 aa11.88□□□□□ -0.51
SNRPA1-214ENST00000560987 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-214ENST00000560987 LY75O60449 1722 aa11.87□□□□□ -0.51
SNRPA1-214ENST00000560987 YY1P25490 414 aa11.87□□□□□ -0.51
SNRPA1-214ENST00000560987 TMPOP42166 694 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-214ENST00000560987 COL23A1Q86Y22 540 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-214ENST00000560987 SLC16A10Q8TF71 515 aa11.87□□□□□ -0.51
SNRPA1-214ENST00000560987 SLC4A9Q96Q91 983 aa11.87□□□□□ -0.51
SNRPA1-214ENST00000560987 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
SNRPA1-214ENST00000560987 RTCBQ9Y3I0 505 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-214ENST00000560987 TRAPPC3LQ5T215 181 aa11.86□□□□□ -0.51
SNRPA1-214ENST00000560987 ZNF790Q6PG37 636 aa11.86□□□□□ -0.51
SNRPA1-214ENST00000560987 FMNL2Q96PY5 1086 aa11.86□□□□□ -0.51
SNRPA1-214ENST00000560987 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-214ENST00000560987 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
SNRPA1-214ENST00000560987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 KCNQ3O43525 872 aa11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 POLD1P28340 1107 aa11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 CRKLP46109 303 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 RC3H1Q5TC82 1133 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 DNAJC10Q8IXB1 793 aa11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 PNISRQ8TF01 805 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 THUMPD2Q9BTF0 503 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 TEX13AQ9BXU3 409 aaPredicted RBP11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 VIRMAQ69YN4 1812 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-214ENST00000560987 APAF1O14727 1248 aa11.84□□□□□ -0.51
SNRPA1-214ENST00000560987 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
SNRPA1-214ENST00000560987 STARD3NLO95772 234 aa11.84□□□□□ -0.51
SNRPA1-214ENST00000560987 RFC4P35249 363 aa11.84□□□□□ -0.51
SNRPA1-214ENST00000560987 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms