RNA–Protein interactions for RNA: ENST00000560940.5

AP3S2-214, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5 BASIC

Gene AP3S2, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-214ENST00000560940 AMIGO3Q86WK7 504 aa9.5□□□□□ -0.89
AP3S2-214ENST00000560940 TMOD3Q9NYL9 352 aa9.5□□□□□ -0.89
AP3S2-214ENST00000560940 BRCA1P38398 1863 aaKnown RBP9.5□□□□□ -0.89
AP3S2-214ENST00000560940 PLEKHG2Q9H7P9 1386 aa9.5□□□□□ -0.89
AP3S2-214ENST00000560940 KIF3CO14782 793 aa9.49□□□□□ -0.89
AP3S2-214ENST00000560940 GNPATO15228 680 aa9.49□□□□□ -0.89
AP3S2-214ENST00000560940 APLP1P51693 650 aa9.49□□□□□ -0.89
AP3S2-214ENST00000560940 LINC00116Q8NCU8 138 aa9.49□□□□□ -0.89
AP3S2-214ENST00000560940 ARFGEF1Q9Y6D6 1849 aa9.49□□□□□ -0.89
AP3S2-214ENST00000560940 COL5A3P25940 1745 aaPredicted RBP9.48□□□□□ -0.89
AP3S2-214ENST00000560940 TOMM70O94826 608 aa9.48□□□□□ -0.89
AP3S2-214ENST00000560940 ATP6V1AP38606 617 aa9.48□□□□□ -0.89
AP3S2-214ENST00000560940 TGFB2P61812 414 aa9.48□□□□□ -0.89
AP3S2-214ENST00000560940 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
AP3S2-214ENST00000560940 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
AP3S2-214ENST00000560940 WASHC2AQ641Q2 1341 aa9.48□□□□□ -0.89
AP3S2-214ENST00000560940 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
AP3S2-214ENST00000560940 MMP10P09238 476 aa9.47□□□□□ -0.89
AP3S2-214ENST00000560940 ITPK1Q13572 414 aa9.47□□□□□ -0.89
AP3S2-214ENST00000560940 SMIM5Q71RC9 77 aa9.47□□□□□ -0.89
AP3S2-214ENST00000560940 WWC3Q9ULE0 1092 aa9.47□□□□□ -0.89
AP3S2-214ENST00000560940 ASAP1Q9ULH1 1129 aa9.47□□□□□ -0.89
AP3S2-214ENST00000560940 EMILIN1Q9Y6C2 1016 aa9.47□□□□□ -0.89
AP3S2-214ENST00000560940 C4AP0C0L4 1744 aa9.47□□□□□ -0.89
AP3S2-214ENST00000560940 PPM1GO15355 546 aaPredicted RBP9.46□□□□□ -0.9
AP3S2-214ENST00000560940 PHKG2P15735 406 aa9.46□□□□□ -0.9
AP3S2-214ENST00000560940 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
AP3S2-214ENST00000560940 EYA1Q99502 592 aa9.46□□□□□ -0.9
AP3S2-214ENST00000560940 CARD14Q9BXL6 1004 aa9.46□□□□□ -0.9
AP3S2-214ENST00000560940 RTCBQ9Y3I0 505 aaKnown RBP9.46□□□□□ -0.9
AP3S2-214ENST00000560940 C10orf71Q711Q0 1435 aa9.46□□□□□ -0.9
AP3S2-214ENST00000560940 WDR90Q96KV7 1748 aa9.45□□□□□ -0.9
AP3S2-214ENST00000560940 RC3H1Q5TC82 1133 aaKnown RBP9.45□□□□□ -0.9
AP3S2-214ENST00000560940 ATG3Q9NT62 314 aa9.45□□□□□ -0.9
AP3S2-214ENST00000560940 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
AP3S2-214ENST00000560940 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
AP3S2-214ENST00000560940 KDRP35968 1356 aa9.45□□□□□ -0.9
AP3S2-214ENST00000560940 MYH14Q7Z406 1995 aaKnown RBP9.44□□□□□ -0.9
AP3S2-214ENST00000560940 A0A0G2JLW4 131 aa9.44□□□□□ -0.9
AP3S2-214ENST00000560940 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
AP3S2-214ENST00000560940 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
AP3S2-214ENST00000560940 ARHGAP27Q6ZUM4 889 aa9.44□□□□□ -0.9
AP3S2-214ENST00000560940 DNAJC5GQ8N7S2 189 aa9.44□□□□□ -0.9
AP3S2-214ENST00000560940 SBF1O95248 1867 aa9.43□□□□□ -0.9
AP3S2-214ENST00000560940 CNTNAP4Q9C0A0 1308 aa9.43□□□□□ -0.9
AP3S2-214ENST00000560940 RPS6KA4O75676 772 aa9.43□□□□□ -0.9
AP3S2-214ENST00000560940 FCHSD2O94868 740 aa9.43□□□□□ -0.9
AP3S2-214ENST00000560940 RFC4P35249 363 aa9.43□□□□□ -0.9
AP3S2-214ENST00000560940 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
AP3S2-214ENST00000560940 DCAF5Q96JK2 942 aa9.43□□□□□ -0.9
AP3S2-214ENST00000560940 PARP3Q9Y6F1 533 aa9.43□□□□□ -0.9
AP3S2-214ENST00000560940 PCNTO95613 3336 aa9.43□□□□□ -0.9
AP3S2-214ENST00000560940 TNRC6CQ9HCJ0 1690 aaKnown RBP9.42□□□□□ -0.9
AP3S2-214ENST00000560940 GYS1P13807 737 aa9.42□□□□□ -0.9
AP3S2-214ENST00000560940 DPEP1P16444 411 aa9.42□□□□□ -0.9
AP3S2-214ENST00000560940 C16orf71Q8IYS4 520 aaPredicted RBP9.42□□□□□ -0.9
AP3S2-214ENST00000560940 RBM46Q8TBY0 533 aaKnown RBP9.42□□□□□ -0.9
AP3S2-214ENST00000560940 POLKQ9UBT6 870 aa9.42□□□□□ -0.9
AP3S2-214ENST00000560940 KDM2BQ8NHM5 1336 aa9.41□□□□□ -0.9
AP3S2-214ENST00000560940 MYCNP04198 464 aaPredicted RBP9.41□□□□□ -0.9
AP3S2-214ENST00000560940 FSTL1Q12841 308 aa9.41□□□□□ -0.9
AP3S2-214ENST00000560940 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
AP3S2-214ENST00000560940 SLC4A9Q96Q91 983 aa9.41□□□□□ -0.9
AP3S2-214ENST00000560940 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
AP3S2-214ENST00000560940 NMRK2Q9NPI5 230 aa9.41□□□□□ -0.9
AP3S2-214ENST00000560940 PIM2Q9P1W9 311 aa9.41□□□□□ -0.9
AP3S2-214ENST00000560940 KCNA3P22001 575 aa9.4□□□□□ -0.9
AP3S2-214ENST00000560940 AMOTQ4VCS5 1084 aa9.4□□□□□ -0.9
AP3S2-214ENST00000560940 PLEKHO1Q53GL0 409 aaPredicted RBP9.4□□□□□ -0.9
AP3S2-214ENST00000560940 DALRD3Q5D0E6 543 aaKnown RBP9.4□□□□□ -0.9
AP3S2-214ENST00000560940 C9orf131Q5VYM1 1079 aa9.4□□□□□ -0.9
AP3S2-214ENST00000560940 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.91
AP3S2-214ENST00000560940 TJP1Q07157 1748 aa9.39□□□□□ -0.91
AP3S2-214ENST00000560940 CABP4P57796 275 aa9.39□□□□□ -0.91
AP3S2-214ENST00000560940 KLRG1Q96E93 195 aa9.39□□□□□ -0.91
AP3S2-214ENST00000560940 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
AP3S2-214ENST00000560940 DLEC1Q9Y238 1755 aa9.38□□□□□ -0.91
AP3S2-214ENST00000560940 ZNF530Q6P9A1 599 aaPredicted RBP9.38□□□□□ -0.91
AP3S2-214ENST00000560940 JMYQ8N9B5 988 aa9.38□□□□□ -0.91
AP3S2-214ENST00000560940 ADAMTS7Q9UKP4 1686 aa9.38□□□□□ -0.91
AP3S2-214ENST00000560940 CCDC88AQ3V6T2 1871 aa9.38□□□□□ -0.91
AP3S2-214ENST00000560940 KDM6AO15550 1401 aaPredicted RBP9.38□□□□□ -0.91
AP3S2-214ENST00000560940 VIRMAQ69YN4 1812 aaKnown RBP9.38□□□□□ -0.91
AP3S2-214ENST00000560940 USP42Q9H9J4 1324 aaKnown RBP9.37□□□□□ -0.91
AP3S2-214ENST00000560940 KCPQ6ZWJ8 1503 aa9.37□□□□□ -0.91
AP3S2-214ENST00000560940 CRKLP46109 303 aaKnown RBP9.37□□□□□ -0.91
AP3S2-214ENST00000560940 MTHFSP49914 203 aa9.37□□□□□ -0.91
AP3S2-214ENST00000560940 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
AP3S2-214ENST00000560940 RNF181Q9P0P0 153 aa9.37□□□□□ -0.91
AP3S2-214ENST00000560940 TIMELESSQ9UNS1 1208 aa9.37□□□□□ -0.91
AP3S2-214ENST00000560940 AFDNP55196 1824 aaKnown RBP9.37□□□□□ -0.91
AP3S2-214ENST00000560940 PTCD1O75127 700 aaKnown RBP9.36□□□□□ -0.91
AP3S2-214ENST00000560940 TNNT2P45379 298 aaPredicted RBP9.36□□□□□ -0.91
AP3S2-214ENST00000560940 FKBP8Q14318 412 aa9.36□□□□□ -0.91
AP3S2-214ENST00000560940 SMC1BQ8NDV3 1235 aa9.36□□□□□ -0.91
AP3S2-214ENST00000560940 NRXN2Q9P2S2 1712 aa9.36□□□□□ -0.91
AP3S2-214ENST00000560940 TM4SF1P30408 202 aa9.35□□□□□ -0.91
AP3S2-214ENST00000560940 DDR1Q08345 913 aa9.35□□□□□ -0.91
AP3S2-214ENST00000560940 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
AP3S2-214ENST00000560940 RRAGCQ9HB90 399 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms