RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 LINC00116Q8NCU8 138 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 DCAF5Q96JK2 942 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 SLC16A10Q8TF71 515 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 SLC4A9Q96Q91 983 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 ARXQ96QS3 562 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 TJP1Q07157 1748 aa18.99■□□□□ 0.63
TNFAIP2-207ENST00000560562 ERVV-2B6SEH9 535 aa18.99■□□□□ 0.63
TNFAIP2-207ENST00000560562 SYT17Q9BSW7 474 aa18.99■□□□□ 0.63
TNFAIP2-207ENST00000560562 DIAPH1O60610 1272 aaKnown RBP18.98■□□□□ 0.63
TNFAIP2-207ENST00000560562 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
TNFAIP2-207ENST00000560562 MAP3K5Q99683 1374 aa18.97■□□□□ 0.63
TNFAIP2-207ENST00000560562 MRC1P22897 1456 aa18.96■□□□□ 0.63
TNFAIP2-207ENST00000560562 CICQ96RK0 1608 aaPredicted RBP18.96■□□□□ 0.63
TNFAIP2-207ENST00000560562 MSL1Q68DK7 614 aa18.96■□□□□ 0.63
TNFAIP2-207ENST00000560562 C4AP0C0L4 1744 aa18.95■□□□□ 0.62
TNFAIP2-207ENST00000560562 MSH5O43196 834 aa18.95■□□□□ 0.62
TNFAIP2-207ENST00000560562 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
TNFAIP2-207ENST00000560562 ATP6V1AP38606 617 aa18.94■□□□□ 0.62
TNFAIP2-207ENST00000560562 AK7Q96M32 723 aa18.94■□□□□ 0.62
TNFAIP2-207ENST00000560562 SIPA1L3O60292 1781 aaPredicted RBP18.94■□□□□ 0.62
TNFAIP2-207ENST00000560562 PHF14O94880 888 aa18.93■□□□□ 0.62
TNFAIP2-207ENST00000560562 CABP4P57796 275 aa18.93■□□□□ 0.62
TNFAIP2-207ENST00000560562 CHD4Q14839 1912 aa18.93■□□□□ 0.62
TNFAIP2-207ENST00000560562 UBR2Q8IWV8 1755 aa18.93■□□□□ 0.62
TNFAIP2-207ENST00000560562 MTHFSDQ2M296 383 aaKnown RBP18.92■□□□□ 0.62
TNFAIP2-207ENST00000560562 AKAP4Q5JQC9 854 aa18.92■□□□□ 0.62
TNFAIP2-207ENST00000560562 NFATC2IPQ8NCF5 419 aa18.92■□□□□ 0.62
TNFAIP2-207ENST00000560562 LGR6Q9HBX8 967 aa18.92■□□□□ 0.62
TNFAIP2-207ENST00000560562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.91■□□□□ 0.62
TNFAIP2-207ENST00000560562 POLD1P28340 1107 aa18.91■□□□□ 0.62
TNFAIP2-207ENST00000560562 RBM42Q9BTD8 480 aaKnown RBP18.91■□□□□ 0.62
TNFAIP2-207ENST00000560562 U2SURPO15042 1029 aaKnown RBP18.9■□□□□ 0.62
TNFAIP2-207ENST00000560562 GNPATO15228 680 aa18.9■□□□□ 0.62
TNFAIP2-207ENST00000560562 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
TNFAIP2-207ENST00000560562 FLAD1Q8NFF5 587 aa18.9■□□□□ 0.62
TNFAIP2-207ENST00000560562 KCPQ6ZWJ8 1503 aa18.89■□□□□ 0.61
TNFAIP2-207ENST00000560562 RNMTO43148 476 aaKnown RBP18.89■□□□□ 0.61
TNFAIP2-207ENST00000560562 SSFA2P28290 1259 aa18.89■□□□□ 0.61
TNFAIP2-207ENST00000560562 KLHL34Q8N239 644 aa18.89■□□□□ 0.61
TNFAIP2-207ENST00000560562 NLGN2Q8NFZ4 835 aa18.89■□□□□ 0.61
TNFAIP2-207ENST00000560562 PTCD1O75127 700 aaKnown RBP18.88■□□□□ 0.61
TNFAIP2-207ENST00000560562 SLC52A2Q9HAB3 445 aa18.88■□□□□ 0.61
TNFAIP2-207ENST00000560562 CNTNAP4Q9C0A0 1308 aa18.86■□□□□ 0.61
TNFAIP2-207ENST00000560562 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
TNFAIP2-207ENST00000560562 DLG5Q8TDM6 1919 aa18.85■□□□□ 0.61
TNFAIP2-207ENST00000560562 KIF13BQ9NQT8 1826 aa18.85■□□□□ 0.61
TNFAIP2-207ENST00000560562 SLC39A6Q13433 755 aa18.84■□□□□ 0.61
TNFAIP2-207ENST00000560562 PHACTR3Q96KR7 559 aa18.84■□□□□ 0.61
TNFAIP2-207ENST00000560562 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
TNFAIP2-207ENST00000560562 KIAA1551Q9HCM1 1747 aa18.84■□□□□ 0.61
TNFAIP2-207ENST00000560562 YY1P25490 414 aa18.83■□□□□ 0.6
TNFAIP2-207ENST00000560562 PRKAR2BP31323 418 aa18.83■□□□□ 0.6
TNFAIP2-207ENST00000560562 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
TNFAIP2-207ENST00000560562 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
TNFAIP2-207ENST00000560562 CRKLP46109 303 aaKnown RBP18.82■□□□□ 0.6
TNFAIP2-207ENST00000560562 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
TNFAIP2-207ENST00000560562 CFAP53Q96M91 514 aa18.82■□□□□ 0.6
TNFAIP2-207ENST00000560562 ARHGEF1Q92888 912 aaKnown RBP18.81■□□□□ 0.6
TNFAIP2-207ENST00000560562 RTCBQ9Y3I0 505 aaKnown RBP18.81■□□□□ 0.6
TNFAIP2-207ENST00000560562 N4BP2Q86UW6 1770 aaPredicted RBP18.8■□□□□ 0.6
TNFAIP2-207ENST00000560562 RPS6KA4O75676 772 aa18.8■□□□□ 0.6
TNFAIP2-207ENST00000560562 DNAJC10Q8IXB1 793 aa18.8■□□□□ 0.6
TNFAIP2-207ENST00000560562 INTS5Q6P9B9 1019 aaKnown RBP18.79■□□□□ 0.6
TNFAIP2-207ENST00000560562 GAS2L2Q8NHY3 880 aa18.79■□□□□ 0.6
TNFAIP2-207ENST00000560562 CEMIPQ8WUJ3 1361 aa18.78■□□□□ 0.6
TNFAIP2-207ENST00000560562 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
TNFAIP2-207ENST00000560562 U2AF1L5P0DN76 240 aaPredicted RBP18.78■□□□□ 0.6
TNFAIP2-207ENST00000560562 YBX3P16989 372 aaKnown RBP eCLIP18.78■□□□□ 0.6
TNFAIP2-207ENST00000560562 U2AF1Q01081 240 aaKnown RBP eCLIP18.78■□□□□ 0.6
TNFAIP2-207ENST00000560562 TRAPPC3LQ5T215 181 aa18.78■□□□□ 0.6
TNFAIP2-207ENST00000560562 GYS1P13807 737 aa18.77■□□□□ 0.6
TNFAIP2-207ENST00000560562 BRCA1P38398 1863 aaKnown RBP18.76■□□□□ 0.59
TNFAIP2-207ENST00000560562 MMP10P09238 476 aa18.76■□□□□ 0.59
TNFAIP2-207ENST00000560562 ADRA2BP18089 450 aa18.76■□□□□ 0.59
TNFAIP2-207ENST00000560562 GPR162Q16538 588 aa18.76■□□□□ 0.59
TNFAIP2-207ENST00000560562 SRP68Q9UHB9 627 aaKnown RBP18.76■□□□□ 0.59
TNFAIP2-207ENST00000560562 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
TNFAIP2-207ENST00000560562 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
TNFAIP2-207ENST00000560562 CYP19A1P11511 503 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP2-207ENST00000560562 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
TNFAIP2-207ENST00000560562 AFDNP55196 1824 aaKnown RBP18.75■□□□□ 0.59
TNFAIP2-207ENST00000560562 FCHSD2O94868 740 aa18.74■□□□□ 0.59
TNFAIP2-207ENST00000560562 RFC4P35249 363 aa18.74■□□□□ 0.59
TNFAIP2-207ENST00000560562 CCDC87Q9NVE4 849 aa18.74■□□□□ 0.59
TNFAIP2-207ENST00000560562 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
TNFAIP2-207ENST00000560562 TEFQ10587 303 aa18.73■□□□□ 0.59
TNFAIP2-207ENST00000560562 DDX10Q13206 875 aaKnown RBP18.73■□□□□ 0.59
TNFAIP2-207ENST00000560562 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
TNFAIP2-207ENST00000560562 ZBTB1Q9Y2K1 713 aa18.73■□□□□ 0.59
TNFAIP2-207ENST00000560562 USP42Q9H9J4 1324 aaKnown RBP18.73■□□□□ 0.59
TNFAIP2-207ENST00000560562 C10orf71Q711Q0 1435 aa18.73■□□□□ 0.59
TNFAIP2-207ENST00000560562 KCNQ3O43525 872 aa18.72■□□□□ 0.59
TNFAIP2-207ENST00000560562 ZNF790Q6PG37 636 aa18.72■□□□□ 0.59
TNFAIP2-207ENST00000560562 PXDNLA1KZ92 1463 aa18.72■□□□□ 0.59
TNFAIP2-207ENST00000560562 DCTN1Q14203 1278 aa18.71■□□□□ 0.59
TNFAIP2-207ENST00000560562 FKBP8Q14318 412 aa18.71■□□□□ 0.59
TNFAIP2-207ENST00000560562 MCM10Q7L590 875 aa18.71■□□□□ 0.59
TNFAIP2-207ENST00000560562 VSIG10Q8N0Z9 540 aa18.71■□□□□ 0.59
TNFAIP2-207ENST00000560562 NLGN1Q8N2Q7 840 aa18.71■□□□□ 0.59
TNFAIP2-207ENST00000560562 WWC3Q9ULE0 1092 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms