RNA–Protein interactions for RNA: ENST00000560509.5

BLM-208, Transcript of Bloom syndrome RecQ like helicase, human

TSL 1 (best) BASIC

Gene BLM, Length 3,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-208	ENST00000560509	ZSCAN20	P17040	1043 aa	Predicted RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	CEP120	Q8N960	986 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	ZBTB9	Q96C00	473 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	FAM122A	Q96E09	287 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	MAF1	Q9H063	256 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	RBM27	Q9P2N5	1060 aa	Known RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	PARD3	Q8TEW0	1356 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	GOLGA6C	A6NDK9	693 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	GOLGA6B	A6NDN3	693 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	ONECUT3	O60422	494 aa	Predicted RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	GOLGA6D	P0CG33	693 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	MKRN4P	Q13434	485 aa	Predicted RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	UTP14C	Q5TAP6	766 aa	Known RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	MRRF	Q96E11	262 aa	Known RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	BCL2L13	Q9BXK5	485 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.64	□□□□□ -1.67
BLM-208	ENST00000560509	GOLGA6A	Q9NYA3	693 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	SRCAP	Q6ZRS2	3230 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	ABCC1	P33527	1531 aa		4.64	□□□□□ -1.67
BLM-208	ENST00000560509	POLD1	P28340	1107 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	MCM6	Q14566	821 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.63	□□□□□ -1.67
BLM-208	ENST00000560509	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.63	□□□□□ -1.67
BLM-208	ENST00000560509	USP47	Q96K76	1375 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	CCDC141	Q6ZP82	1450 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	ARID4A	P29374	1257 aa	Predicted RBP	4.63	□□□□□ -1.67
BLM-208	ENST00000560509	NUTM2G	Q5VZR2	741 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	PNISR	Q8TF01	805 aa	Known RBP	4.63	□□□□□ -1.67
BLM-208	ENST00000560509	C8orf37	Q96NL8	207 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	UBA5	Q9GZZ9	404 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	NEO1	Q92859	1461 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	INO80	Q9ULG1	1556 aa	Predicted RBP	4.63	□□□□□ -1.67
BLM-208	ENST00000560509	TGFB3	P10600	412 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	RFX1	P22670	979 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	PPP4C	P60510	307 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	MYO3A	Q8NEV4	1616 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	NUTM2F	A1L443	756 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	SPDYE5	A6NIY4	337 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	MAP4K4	O95819	1239 aa	Predicted RBP	4.63	□□□□□ -1.67
BLM-208	ENST00000560509	MNX1	P50219	401 aa	Predicted RBP	4.63	□□□□□ -1.67
BLM-208	ENST00000560509	MICALL1	Q8N3F8	863 aa		4.63	□□□□□ -1.67
BLM-208	ENST00000560509	PLEKHH2	Q8IVE3	1493 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	ZC3H13	Q5T200	1668 aa	Known RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	RBM47	A0AV96	593 aa	Known RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	SH3BP5	O60239	455 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	CCT2	P78371	535 aa	Known RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	RBM26	Q5T8P6	1007 aa	Known RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	AIDA	Q96BJ3	306 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	NRBP1	Q9UHY1	535 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	DUOX2	Q9NRD8	1548 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	ZNF518A	Q6AHZ1	1483 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	SCAF11	Q99590	1463 aa	Known RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	EPB41L2	O43491	1005 aa	Known RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	TDO2	P48775	406 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	DMTN	Q08495	405 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	RNF187	Q5TA31	235 aa	Predicted RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	GET4	Q7L5D6	327 aa	Predicted RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	TESK2	Q96S53	571 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	YY1AP1	Q9H869	796 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	PLSCR2	Q9NRY7	297 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	ZFYVE16	Q7Z3T8	1539 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	NPAT	Q14207	1427 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	PRKAR2A	P13861	404 aa	Known RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	GNL2	Q13823	731 aa	Known RBP	4.62	□□□□□ -1.67
BLM-208	ENST00000560509	RALBP1	Q15311	655 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	GIMAP6	Q6P9H5	292 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	LRP6	O75581	1613 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	TRPM2	O94759	1503 aa		4.62	□□□□□ -1.67
BLM-208	ENST00000560509	MED14	O60244	1454 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	NRXN1	Q9ULB1	1477 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	CLTCL1	P53675	1640 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.61	□□□□□ -1.67
BLM-208	ENST00000560509	CCDC189	A1A4V9	331 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	EXOC5	O00471	708 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	UVSSA	Q2YD98	709 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	ANKLE2	Q86XL3	938 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.61	□□□□□ -1.67
BLM-208	ENST00000560509	NAP1L4	Q99733	375 aa	Known RBP	4.61	□□□□□ -1.67
BLM-208	ENST00000560509	PDCL3	Q9H2J4	239 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	CLEC11A	Q9Y240	323 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	COQ9	O75208	318 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	SPDYE1	Q8NFV5	336 aa	Predicted RBP	4.61	□□□□□ -1.67
BLM-208	ENST00000560509	TRIM34	Q9BYJ4	488 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	ERBIN	Q96RT1	1412 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	TCERG1	O14776	1098 aa	Known RBP	4.61	□□□□□ -1.67
BLM-208	ENST00000560509	RAB11FIP3	O75154	756 aa		4.61	□□□□□ -1.67
BLM-208	ENST00000560509	SKIL	P12757	684 aa		4.6	□□□□□ -1.67
BLM-208	ENST00000560509	PAX3	P23760	479 aa		4.6	□□□□□ -1.67
BLM-208	ENST00000560509	MAP2K1	Q02750	393 aa	Predicted RBP	4.6	□□□□□ -1.67
BLM-208	ENST00000560509	NOP9	Q86U38	636 aa	Known RBP	4.6	□□□□□ -1.67
BLM-208	ENST00000560509	CACNA1G	O43497	2377 aa		4.6	□□□□□ -1.67
BLM-208	ENST00000560509	KTN1	Q86UP2	1357 aa	Known RBP	4.6	□□□□□ -1.67
BLM-208	ENST00000560509	PPP1R12A	O14974	1030 aa	Predicted RBP	4.6	□□□□□ -1.67
BLM-208	ENST00000560509	KRBA2	Q6ZNG9	492 aa		4.6	□□□□□ -1.67
BLM-208	ENST00000560509	MICAL1	Q8TDZ2	1067 aa		4.6	□□□□□ -1.67
BLM-208	ENST00000560509	BIN2	Q9UBW5	565 aa	Predicted RBP	4.6	□□□□□ -1.67
BLM-208	ENST00000560509	SHPRH	Q149N8	1683 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms