RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 SMPD1P17405 629 aa9.94□□□□□ -0.82
MARK3-220ENST00000560417 SCNN1AP37088 669 aa9.94□□□□□ -0.82
MARK3-220ENST00000560417 CBLBQ13191 982 aa9.94□□□□□ -0.82
MARK3-220ENST00000560417 MTFR1Q15390 333 aa9.94□□□□□ -0.82
MARK3-220ENST00000560417 ESCO1Q5FWF5 840 aa9.94□□□□□ -0.82
MARK3-220ENST00000560417 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
MARK3-220ENST00000560417 CYP4X1Q8N118 509 aa9.94□□□□□ -0.82
MARK3-220ENST00000560417 XAGE2Q96GT9 111 aa9.94□□□□□ -0.82
MARK3-220ENST00000560417 TTC24A2A3L6 582 aaPredicted RBP9.93□□□□□ -0.82
MARK3-220ENST00000560417 IL2RAP01589 272 aa9.93□□□□□ -0.82
MARK3-220ENST00000560417 TIMP2P16035 220 aa9.93□□□□□ -0.82
MARK3-220ENST00000560417 IGFBP4P22692 258 aa9.93□□□□□ -0.82
MARK3-220ENST00000560417 SND1Q7KZF4 910 aaKnown RBP eCLIP9.93□□□□□ -0.82
MARK3-220ENST00000560417 TNS4Q8IZW8 715 aa9.93□□□□□ -0.82
MARK3-220ENST00000560417 ARHGEF10LQ9HCE6 1279 aa9.93□□□□□ -0.82
MARK3-220ENST00000560417 C21orf2O43822 256 aa9.92□□□□□ -0.82
MARK3-220ENST00000560417 ZIC2O95409 532 aaPredicted RBP9.92□□□□□ -0.82
MARK3-220ENST00000560417 FOXK2Q01167 660 aa9.92□□□□□ -0.82
MARK3-220ENST00000560417 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
MARK3-220ENST00000560417 RAB6BQ9NRW1 208 aa9.92□□□□□ -0.82
MARK3-220ENST00000560417 SERTAD1Q9UHV2 236 aa9.92□□□□□ -0.82
MARK3-220ENST00000560417 WDR4P57081 412 aaKnown RBP9.91□□□□□ -0.82
MARK3-220ENST00000560417 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
MARK3-220ENST00000560417 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
MARK3-220ENST00000560417 ESYT1Q9BSJ8 1104 aa9.91□□□□□ -0.82
MARK3-220ENST00000560417 A6NJY4 79 aa9.9□□□□□ -0.82
MARK3-220ENST00000560417 PTGIRP43119 386 aa9.9□□□□□ -0.82
MARK3-220ENST00000560417 SERPINB4P48594 390 aa9.9□□□□□ -0.82
MARK3-220ENST00000560417 SMTNP53814 917 aa9.9□□□□□ -0.82
MARK3-220ENST00000560417 CLN3Q13286 438 aa9.9□□□□□ -0.82
MARK3-220ENST00000560417 GAS2L2Q8NHY3 880 aa9.9□□□□□ -0.82
MARK3-220ENST00000560417 CNKSR1Q969H4 720 aa9.9□□□□□ -0.82
MARK3-220ENST00000560417 COL26A1Q96A83 441 aa9.9□□□□□ -0.82
MARK3-220ENST00000560417 TSPAN10Q9H1Z9 355 aaPredicted RBP9.9□□□□□ -0.82
MARK3-220ENST00000560417 SCHIP1Q9P0W5 487 aaPredicted RBP9.9□□□□□ -0.82
MARK3-220ENST00000560417 ATAD2Q6PL18 1390 aa9.89□□□□□ -0.83
MARK3-220ENST00000560417 A0A1W2PRU2 124 aa9.89□□□□□ -0.83
MARK3-220ENST00000560417 FOXO3O43524 673 aa9.89□□□□□ -0.83
MARK3-220ENST00000560417 MFAP1P55081 439 aaKnown RBP9.89□□□□□ -0.83
MARK3-220ENST00000560417 SCG3Q8WXD2 468 aaKnown RBP9.88□□□□□ -0.83
MARK3-220ENST00000560417 FHDC1Q9C0D6 1143 aaPredicted RBP9.88□□□□□ -0.83
MARK3-220ENST00000560417 IQSEC3Q9UPP2 1182 aaPredicted RBP9.88□□□□□ -0.83
MARK3-220ENST00000560417 SOWAHDA6NJG2 315 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 RGS20O76081 388 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 POTEAQ6S8J7 498 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 CAPN12Q6ZSI9 719 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 STAG2Q8N3U4 1231 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 MEIOBQ8N635 442 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 HPS1Q92902 700 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 AGBL1Q96MI9 1066 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 EGFL7Q9UHF1 273 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 MTMR7Q9Y216 660 aa9.87□□□□□ -0.83
MARK3-220ENST00000560417 CDK2AP1O14519 115 aa9.86□□□□□ -0.83
MARK3-220ENST00000560417 PTCD1O75127 700 aaKnown RBP9.86□□□□□ -0.83
MARK3-220ENST00000560417 SLC9A9Q8IVB4 645 aa9.86□□□□□ -0.83
MARK3-220ENST00000560417 ZNF295-AS1Q8N0V1 137 aa9.86□□□□□ -0.83
MARK3-220ENST00000560417 RGS22Q8NE09 1264 aa9.86□□□□□ -0.83
MARK3-220ENST00000560417 USP3Q9Y6I4 520 aa9.86□□□□□ -0.83
MARK3-220ENST00000560417 CENPCQ03188 943 aa9.85□□□□□ -0.83
MARK3-220ENST00000560417 TLR1Q15399 786 aa9.85□□□□□ -0.83
MARK3-220ENST00000560417 C2orf49Q9BVC5 232 aaPredicted RBP9.85□□□□□ -0.83
MARK3-220ENST00000560417 SEPT3Q9UH03 358 aa9.85□□□□□ -0.83
MARK3-220ENST00000560417 MKNK1Q9BUB5 465 aa9.84□□□□□ -0.83
MARK3-220ENST00000560417 PSMA6P60900 246 aaKnown RBP9.83□□□□□ -0.84
MARK3-220ENST00000560417 RELBQ01201 579 aa9.83□□□□□ -0.84
MARK3-220ENST00000560417 CCDC27Q2M243 656 aa9.83□□□□□ -0.84
MARK3-220ENST00000560417 TBCELQ5QJ74 424 aa9.83□□□□□ -0.84
MARK3-220ENST00000560417 PPP1R12BO60237 982 aaPredicted RBP9.82□□□□□ -0.84
MARK3-220ENST00000560417 ECM1Q16610 540 aa9.82□□□□□ -0.84
MARK3-220ENST00000560417 GTF3C2Q8WUA4 911 aaPredicted RBP9.82□□□□□ -0.84
MARK3-220ENST00000560417 ZNF395Q9H8N7 513 aaPredicted RBP9.82□□□□□ -0.84
MARK3-220ENST00000560417 DNMT3AQ9Y6K1 912 aaPredicted RBP9.82□□□□□ -0.84
MARK3-220ENST00000560417 ICMTO60725 284 aa9.81□□□□□ -0.84
MARK3-220ENST00000560417 PPARGC1BQ86YN6 1023 aaKnown RBP9.81□□□□□ -0.84
MARK3-220ENST00000560417 MEN1O00255 615 aa9.8□□□□□ -0.84
MARK3-220ENST00000560417 SPINT1O43278 529 aa9.8□□□□□ -0.84
MARK3-220ENST00000560417 GPC1P35052 558 aa9.8□□□□□ -0.84
MARK3-220ENST00000560417 HIRAP54198 1017 aaPredicted RBP9.8□□□□□ -0.84
MARK3-220ENST00000560417 ZNF211Q13398 564 aaPredicted RBP9.8□□□□□ -0.84
MARK3-220ENST00000560417 TEAD4Q15561 434 aa9.8□□□□□ -0.84
MARK3-220ENST00000560417 NBPF15Q8N660 670 aa9.8□□□□□ -0.84
MARK3-220ENST00000560417 ZDHHC1Q8WTX9 485 aa9.8□□□□□ -0.84
MARK3-220ENST00000560417 CHMP7Q8WUX9 453 aaPredicted RBP9.8□□□□□ -0.84
MARK3-220ENST00000560417 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
MARK3-220ENST00000560417 TSEN34Q9BSV6 310 aaKnown RBP9.8□□□□□ -0.84
MARK3-220ENST00000560417 CAPN5O15484 640 aaPredicted RBP9.79□□□□□ -0.84
MARK3-220ENST00000560417 ABL1P00519 1130 aa9.79□□□□□ -0.84
MARK3-220ENST00000560417 AVPP01185 164 aa9.79□□□□□ -0.84
MARK3-220ENST00000560417 SF3B2Q13435 895 aaKnown RBP9.79□□□□□ -0.84
MARK3-220ENST00000560417 NAA30Q147X3 362 aaPredicted RBP9.79□□□□□ -0.84
MARK3-220ENST00000560417 HELQQ8TDG4 1101 aa9.79□□□□□ -0.84
MARK3-220ENST00000560417 GRIP2Q9C0E4 1043 aa9.79□□□□□ -0.84
MARK3-220ENST00000560417 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
MARK3-220ENST00000560417 EML1O00423 815 aa9.78□□□□□ -0.84
MARK3-220ENST00000560417 NPR3P17342 541 aa9.78□□□□□ -0.84
MARK3-220ENST00000560417 RNF144AP50876 292 aaPredicted RBP9.78□□□□□ -0.84
MARK3-220ENST00000560417 FKBP4Q02790 459 aaKnown RBP eCLIP9.78□□□□□ -0.84
MARK3-220ENST00000560417 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
MARK3-220ENST00000560417 ZSCAN10Q96SZ4 725 aaPredicted RBP9.78□□□□□ -0.84
MARK3-220ENST00000560417 H3BRB1 525 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms