RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
LRRC28-218ENST00000560236 A0A1B0GTH6 734 aa8.18□□□□□ -1.1
LRRC28-218ENST00000560236 USP4Q13107 963 aa8.18□□□□□ -1.1
LRRC28-218ENST00000560236 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
LRRC28-218ENST00000560236 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
LRRC28-218ENST00000560236 TMEM214Q6NUQ4 689 aaKnown RBP8.18□□□□□ -1.1
LRRC28-218ENST00000560236 NEDD1Q8NHV4 660 aa8.18□□□□□ -1.1
LRRC28-218ENST00000560236 HRH3Q9Y5N1 445 aa8.18□□□□□ -1.1
LRRC28-218ENST00000560236 PHF20L1A8MW92 1017 aa8.17□□□□□ -1.1
LRRC28-218ENST00000560236 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
LRRC28-218ENST00000560236 FHDC1Q9C0D6 1143 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-218ENST00000560236 IGHA1P01876 353 aa8.16□□□□□ -1.1
LRRC28-218ENST00000560236 FOXK2Q01167 660 aa8.16□□□□□ -1.1
LRRC28-218ENST00000560236 IRF5Q13568 498 aa8.16□□□□□ -1.1
LRRC28-218ENST00000560236 PODNQ7Z5L7 613 aa8.16□□□□□ -1.1
LRRC28-218ENST00000560236 PHTF2Q8N3S3 785 aa8.16□□□□□ -1.1
LRRC28-218ENST00000560236 BEND7Q8N7W2 519 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-218ENST00000560236 CNTNAP5Q8WYK1 1306 aa8.16□□□□□ -1.1
LRRC28-218ENST00000560236 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
LRRC28-218ENST00000560236 LRRC4BQ9NT99 713 aa8.16□□□□□ -1.1
LRRC28-218ENST00000560236 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 THBS1P07996 1170 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 MAP2K3P46734 347 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 C4orf17Q53FE4 359 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 OXLD1Q5BKU9 147 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 PGBD3Q8N328 593 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 KRTAP4-6Q9BYQ5 205 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 PHF24Q9UPV7 400 aa8.15□□□□□ -1.1
LRRC28-218ENST00000560236 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
LRRC28-218ENST00000560236 OXCT2Q9BYC2 517 aaPredicted RBP8.14□□□□□ -1.11
LRRC28-218ENST00000560236 ETNK1Q9HBU6 452 aa8.14□□□□□ -1.11
LRRC28-218ENST00000560236 OIP5O43482 229 aa8.13□□□□□ -1.11
LRRC28-218ENST00000560236 STAU1O95793 577 aaKnown RBP8.13□□□□□ -1.11
LRRC28-218ENST00000560236 MSX1P28360 303 aa8.13□□□□□ -1.11
LRRC28-218ENST00000560236 VAC14Q08AM6 782 aa8.13□□□□□ -1.11
LRRC28-218ENST00000560236 LBRQ14739 615 aaKnown RBP8.13□□□□□ -1.11
LRRC28-218ENST00000560236 TLR1Q15399 786 aa8.13□□□□□ -1.11
LRRC28-218ENST00000560236 RUBCNLQ9H714 662 aa8.13□□□□□ -1.11
LRRC28-218ENST00000560236 GDPD2Q9HCC8 539 aa8.13□□□□□ -1.11
LRRC28-218ENST00000560236 EFHC2Q5JST6 749 aa8.12□□□□□ -1.11
LRRC28-218ENST00000560236 PPARGC1BQ86YN6 1023 aaKnown RBP8.12□□□□□ -1.11
LRRC28-218ENST00000560236 RHBDD1Q8TEB9 315 aa8.12□□□□□ -1.11
LRRC28-218ENST00000560236 ABL2P42684 1182 aa8.11□□□□□ -1.11
LRRC28-218ENST00000560236 DCAF5Q96JK2 942 aa8.11□□□□□ -1.11
LRRC28-218ENST00000560236 CHIC2Q9UKJ5 165 aa8.11□□□□□ -1.11
LRRC28-218ENST00000560236 UBAP2LQ14157 1087 aaKnown RBP8.1□□□□□ -1.11
LRRC28-218ENST00000560236 KLRG1Q96E93 195 aa8.1□□□□□ -1.11
LRRC28-218ENST00000560236 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
LRRC28-218ENST00000560236 MAP7D1Q3KQU3 841 aa8.09□□□□□ -1.11
LRRC28-218ENST00000560236 PLA2G4EQ3MJ16 856 aa8.09□□□□□ -1.11
LRRC28-218ENST00000560236 GALNT6Q8NCL4 622 aa8.09□□□□□ -1.11
LRRC28-218ENST00000560236 GDF2Q9UK05 429 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-218ENST00000560236 ATXN7L1Q9ULK2 861 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-218ENST00000560236 INHAP05111 366 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 BMP4P12644 408 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 PLA2G4AP47712 749 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 SCNN1DP51172 638 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 GDF10P55107 478 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 SEMA3FQ13275 785 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 TBC1D9Q6ZT07 1266 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 PLPP7Q8NBV4 271 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 ABHD17AQ96GS6 310 aa8.08□□□□□ -1.12
LRRC28-218ENST00000560236 SHISA8B8ZZ34 492 aa8.07□□□□□ -1.12
LRRC28-218ENST00000560236 MSTNO14793 375 aa8.07□□□□□ -1.12
LRRC28-218ENST00000560236 SNRPNP63162 240 aaKnown RBP8.07□□□□□ -1.12
LRRC28-218ENST00000560236 GOLGA6L1Q8N7Z2 621 aa8.07□□□□□ -1.12
LRRC28-218ENST00000560236 CRISPLD1Q9H336 500 aa8.07□□□□□ -1.12
LRRC28-218ENST00000560236 BNIP3LO60238 219 aa8.06□□□□□ -1.12
LRRC28-218ENST00000560236 FGFR3P22607 806 aa8.06□□□□□ -1.12
LRRC28-218ENST00000560236 SOX11P35716 441 aa8.06□□□□□ -1.12
LRRC28-218ENST00000560236 C1orf229Q6ZS94 237 aaPredicted RBP8.06□□□□□ -1.12
LRRC28-218ENST00000560236 EDARADDQ8WWZ3 215 aa8.06□□□□□ -1.12
LRRC28-218ENST00000560236 NIFKQ9BYG3 293 aaKnown RBP8.06□□□□□ -1.12
LRRC28-218ENST00000560236 RRAGCQ9HB90 399 aa8.06□□□□□ -1.12
LRRC28-218ENST00000560236 C2CD2LO14523 706 aa8.05□□□□□ -1.12
LRRC28-218ENST00000560236 SMTNP53814 917 aa8.05□□□□□ -1.12
LRRC28-218ENST00000560236 FIGNL1Q6PIW4 674 aa8.05□□□□□ -1.12
LRRC28-218ENST00000560236 C1orf216Q8TAB5 229 aa8.05□□□□□ -1.12
LRRC28-218ENST00000560236 AIDAQ96BJ3 306 aa8.05□□□□□ -1.12
LRRC28-218ENST00000560236 NDFIP2Q9NV92 336 aa8.05□□□□□ -1.12
LRRC28-218ENST00000560236 MKL2Q9ULH7 1088 aa8.05□□□□□ -1.12
LRRC28-218ENST00000560236 CTBSQ01459 385 aa8.04□□□□□ -1.12
LRRC28-218ENST00000560236 MCM6Q14566 821 aa8.04□□□□□ -1.12
LRRC28-218ENST00000560236 SPOCK3Q9BQ16 436 aa8.04□□□□□ -1.12
LRRC28-218ENST00000560236 SERTAD1Q9UHV2 236 aa8.04□□□□□ -1.12
LRRC28-218ENST00000560236 ATP4AP20648 1035 aa8.03□□□□□ -1.12
LRRC28-218ENST00000560236 AMPD1P23109 780 aa8.03□□□□□ -1.12
LRRC28-218ENST00000560236 SLCO4C1Q6ZQN7 724 aa8.03□□□□□ -1.12
LRRC28-218ENST00000560236 ZCCHC2Q9C0B9 1178 aaKnown RBP8.03□□□□□ -1.12
LRRC28-218ENST00000560236 GGA1Q9UJY5 639 aa8.03□□□□□ -1.12
LRRC28-218ENST00000560236 PCDHGC4Q9Y5F7 938 aa8.03□□□□□ -1.12
LRRC28-218ENST00000560236 ITGB2P05107 769 aa8.02□□□□□ -1.13
LRRC28-218ENST00000560236 NBPF1Q3BBV0 1214 aa8.02□□□□□ -1.13
LRRC28-218ENST00000560236 ARSJQ5FYB0 599 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-218ENST00000560236 NLRP8Q86W28 1048 aa8.02□□□□□ -1.13
LRRC28-218ENST00000560236 DNAAF2Q9NVR5 837 aaKnown RBP8.02□□□□□ -1.13
LRRC28-218ENST00000560236 SLC4A9Q96Q91 983 aa8.01□□□□□ -1.13
LRRC28-218ENST00000560236 A0A1W2PNR3 127 aa8□□□□□ -1.13
LRRC28-218ENST00000560236 A6NJY4 79 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms