RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 SPATA31A6Q5VVP1 1343 aa18.18■□□□□ 0.5
RABGGTA-212ENST00000559974 INTS3Q68E01 1043 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-212ENST00000559974 CHD1LQ86WJ1 897 aa18.18■□□□□ 0.5
RABGGTA-212ENST00000559974 C8orf37Q96NL8 207 aa18.18■□□□□ 0.5
RABGGTA-212ENST00000559974 BTG4Q9NY30 223 aa18.18■□□□□ 0.5
RABGGTA-212ENST00000559974 TSPYL4Q9UJ04 414 aa18.18■□□□□ 0.5
RABGGTA-212ENST00000559974 PTPRCP08575 1304 aa18.18■□□□□ 0.5
RABGGTA-212ENST00000559974 ANKRD24Q8TF21 1146 aa18.17■□□□□ 0.5
RABGGTA-212ENST00000559974 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
RABGGTA-212ENST00000559974 COL5A2P05997 1499 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-212ENST00000559974 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-212ENST00000559974 TBC1D32Q96NH3 1257 aa18.17■□□□□ 0.5
RABGGTA-212ENST00000559974 SIRT2Q8IXJ6 389 aa18.16■□□□□ 0.5
RABGGTA-212ENST00000559974 LNPKQ9C0E8 428 aa18.16■□□□□ 0.5
RABGGTA-212ENST00000559974 STRN4Q9NRL3 753 aa18.16■□□□□ 0.5
RABGGTA-212ENST00000559974 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
RABGGTA-212ENST00000559974 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
RABGGTA-212ENST00000559974 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-212ENST00000559974 ERBB3P21860 1342 aa18.15■□□□□ 0.5
RABGGTA-212ENST00000559974 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
RABGGTA-212ENST00000559974 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
RABGGTA-212ENST00000559974 MAP3K5Q99683 1374 aa18.14■□□□□ 0.5
RABGGTA-212ENST00000559974 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-212ENST00000559974 USP35Q9P2H5 1018 aa18.14■□□□□ 0.49
RABGGTA-212ENST00000559974 SLIT2O94813 1529 aa18.13■□□□□ 0.49
RABGGTA-212ENST00000559974 ABCC6O95255 1503 aa18.13■□□□□ 0.49
RABGGTA-212ENST00000559974 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
RABGGTA-212ENST00000559974 SLC4A2P04920 1241 aa18.12■□□□□ 0.49
RABGGTA-212ENST00000559974 BECN1Q14457 450 aa18.12■□□□□ 0.49
RABGGTA-212ENST00000559974 NGLY1Q96IV0 654 aa18.12■□□□□ 0.49
RABGGTA-212ENST00000559974 MEX3CQ5U5Q3 659 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-212ENST00000559974 BCL9LQ86UU0 1499 aa18.11■□□□□ 0.49
RABGGTA-212ENST00000559974 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
RABGGTA-212ENST00000559974 NWD2Q9ULI1 1742 aa18.1■□□□□ 0.49
RABGGTA-212ENST00000559974 CSB-PGBD3P0DP91 1061 aa18.1■□□□□ 0.49
RABGGTA-212ENST00000559974 BMP2KLQ5H9B9 411 aa18.1■□□□□ 0.49
RABGGTA-212ENST00000559974 BABAM1Q9NWV8 329 aa18.1■□□□□ 0.49
RABGGTA-212ENST00000559974 NLRP2Q9NX02 1062 aa18.1■□□□□ 0.49
RABGGTA-212ENST00000559974 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
RABGGTA-212ENST00000559974 IL17REQ8NFR9 667 aa18.09■□□□□ 0.49
RABGGTA-212ENST00000559974 AFF2P51816 1311 aa18.08■□□□□ 0.49
RABGGTA-212ENST00000559974 SOS1Q07889 1333 aaPredicted RBP18.08■□□□□ 0.49
RABGGTA-212ENST00000559974 WDR17Q8IZU2 1322 aa18.08■□□□□ 0.49
RABGGTA-212ENST00000559974 ANKRD44Q8N8A2 993 aa18.08■□□□□ 0.49
RABGGTA-212ENST00000559974 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.48
RABGGTA-212ENST00000559974 EVA1CP58658 441 aa18.08■□□□□ 0.48
RABGGTA-212ENST00000559974 RPAP2Q8IXW5 612 aaPredicted RBP18.08■□□□□ 0.48
RABGGTA-212ENST00000559974 DCTPP1Q9H773 170 aa18.08■□□□□ 0.48
RABGGTA-212ENST00000559974 TOM1L2Q6ZVM7 507 aa18.07■□□□□ 0.48
RABGGTA-212ENST00000559974 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
RABGGTA-212ENST00000559974 STK31Q9BXU1 1019 aa18.07■□□□□ 0.48
RABGGTA-212ENST00000559974 C22orf23Q9BZE7 217 aa18.07■□□□□ 0.48
RABGGTA-212ENST00000559974 DEKP35659 375 aaKnown RBP18.06■□□□□ 0.48
RABGGTA-212ENST00000559974 TAF7Q15545 349 aaPredicted RBP18.06■□□□□ 0.48
RABGGTA-212ENST00000559974 G2E3Q7L622 706 aa18.06■□□□□ 0.48
RABGGTA-212ENST00000559974 KDM3BQ7LBC6 1761 aa18.06■□□□□ 0.48
RABGGTA-212ENST00000559974 CEP85Q6P2H3 762 aa18.06■□□□□ 0.48
RABGGTA-212ENST00000559974 CCT4P50991 539 aaKnown RBP18.05■□□□□ 0.48
RABGGTA-212ENST00000559974 CCDC30Q5VVM6 783 aa18.05■□□□□ 0.48
RABGGTA-212ENST00000559974 MEIS3Q99687 375 aa18.05■□□□□ 0.48
RABGGTA-212ENST00000559974 USP21Q9UK80 565 aa18.05■□□□□ 0.48
RABGGTA-212ENST00000559974 NCAPD2Q15021 1401 aa18.04■□□□□ 0.48
RABGGTA-212ENST00000559974 MEGF6O75095 1541 aa18.04■□□□□ 0.48
RABGGTA-212ENST00000559974 CEMIPQ8WUJ3 1361 aa18.04■□□□□ 0.48
RABGGTA-212ENST00000559974 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
RABGGTA-212ENST00000559974 UNC5CLQ8IV45 518 aa18.04■□□□□ 0.48
RABGGTA-212ENST00000559974 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-212ENST00000559974 F6X3S4 739 aa18.02■□□□□ 0.47
RABGGTA-212ENST00000559974 FLIIQ13045 1269 aa18.02■□□□□ 0.47
RABGGTA-212ENST00000559974 SLC4A10Q6U841 1118 aa18.02■□□□□ 0.47
RABGGTA-212ENST00000559974 TBC1D2Q9BYX2 928 aa18.01■□□□□ 0.47
RABGGTA-212ENST00000559974 CCDC9Q9Y3X0 531 aaKnown RBP18.01■□□□□ 0.47
RABGGTA-212ENST00000559974 WNK3Q9BYP7 1800 aa18.01■□□□□ 0.47
RABGGTA-212ENST00000559974 CARD10Q9BWT7 1032 aa18■□□□□ 0.47
RABGGTA-212ENST00000559974 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
RABGGTA-212ENST00000559974 GLI3P10071 1580 aa18■□□□□ 0.47
RABGGTA-212ENST00000559974 SPATA31A1Q5TZJ5 1347 aa18■□□□□ 0.47
RABGGTA-212ENST00000559974 EP400Q96L91 3159 aa18■□□□□ 0.47
RABGGTA-212ENST00000559974 PXDNLA1KZ92 1463 aa18■□□□□ 0.47
RABGGTA-212ENST00000559974 SPATA31A5Q5VU36 1347 aa18■□□□□ 0.47
RABGGTA-212ENST00000559974 SPATA31A7Q8IWB4 1347 aa18■□□□□ 0.47
RABGGTA-212ENST00000559974 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-212ENST00000559974 PLEKHM2Q8IWE5 1019 aa17.99■□□□□ 0.47
RABGGTA-212ENST00000559974 HMMRO75330 724 aa17.99■□□□□ 0.47
RABGGTA-212ENST00000559974 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-212ENST00000559974 PLEKHO1Q53GL0 409 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-212ENST00000559974 AKAP4Q5JQC9 854 aa17.98■□□□□ 0.47
RABGGTA-212ENST00000559974 NECTIN2Q92692 538 aa17.98■□□□□ 0.47
RABGGTA-212ENST00000559974 ATRNO75882 1429 aa17.98■□□□□ 0.47
RABGGTA-212ENST00000559974 SHANK3Q9BYB0 1731 aa17.97■□□□□ 0.47
RABGGTA-212ENST00000559974 VPS72Q15906 364 aa17.97■□□□□ 0.47
RABGGTA-212ENST00000559974 AMOTQ4VCS5 1084 aa17.97■□□□□ 0.47
RABGGTA-212ENST00000559974 GNAI2P04899 355 aa17.97■□□□□ 0.47
RABGGTA-212ENST00000559974 HDGFL1Q5TGJ6 251 aa17.97■□□□□ 0.47
RABGGTA-212ENST00000559974 ZNF530Q6P9A1 599 aaPredicted RBP17.97■□□□□ 0.47
RABGGTA-212ENST00000559974 TBC1D9Q6ZT07 1266 aa17.97■□□□□ 0.47
RABGGTA-212ENST00000559974 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
RABGGTA-212ENST00000559974 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-212ENST00000559974 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-212ENST00000559974 OVOS2A0A0G2JMS6 1433 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms