RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 TBC1D2BQ9UPU7 963 aa9.9□□□□□ -0.82
CRNDE-207ENST00000559598 ERFEQ4G0M1 354 aa9.89□□□□□ -0.83
CRNDE-207ENST00000559598 TRMT44Q8IYL2 757 aaKnown RBP9.89□□□□□ -0.83
CRNDE-207ENST00000559598 CDK11AQ9UQ88 783 aaPredicted RBP9.89□□□□□ -0.83
CRNDE-207ENST00000559598 PLA2R1Q13018 1463 aa9.89□□□□□ -0.83
CRNDE-207ENST00000559598 ITSN2Q9NZM3 1697 aa9.89□□□□□ -0.83
CRNDE-207ENST00000559598 CLIP1P30622 1438 aa9.89□□□□□ -0.83
CRNDE-207ENST00000559598 CDC42BPBQ9Y5S2 1711 aa9.88□□□□□ -0.83
CRNDE-207ENST00000559598 HPS1Q92902 700 aa9.88□□□□□ -0.83
CRNDE-207ENST00000559598 CDK15Q96Q40 435 aa9.88□□□□□ -0.83
CRNDE-207ENST00000559598 PREX2Q70Z35 1606 aa9.88□□□□□ -0.83
CRNDE-207ENST00000559598 FMN1Q68DA7 1419 aa9.88□□□□□ -0.83
CRNDE-207ENST00000559598 ABCC1P33527 1531 aa9.87□□□□□ -0.83
CRNDE-207ENST00000559598 ZBBXA8MT70 800 aa9.87□□□□□ -0.83
CRNDE-207ENST00000559598 ADAM32Q8TC27 787 aa9.87□□□□□ -0.83
CRNDE-207ENST00000559598 KIFC2Q96AC6 838 aa9.87□□□□□ -0.83
CRNDE-207ENST00000559598 GDPD2Q9HCC8 539 aa9.87□□□□□ -0.83
CRNDE-207ENST00000559598 MED1Q15648 1581 aaPredicted RBP9.87□□□□□ -0.83
CRNDE-207ENST00000559598 MYO3AQ8NEV4 1616 aa9.86□□□□□ -0.83
CRNDE-207ENST00000559598 KIDINS220Q9ULH0 1771 aa9.86□□□□□ -0.83
CRNDE-207ENST00000559598 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
CRNDE-207ENST00000559598 TROQ12816 1431 aaPredicted RBP9.86□□□□□ -0.83
CRNDE-207ENST00000559598 ARID5BQ14865 1188 aa9.86□□□□□ -0.83
CRNDE-207ENST00000559598 WASF2Q9Y6W5 498 aa9.86□□□□□ -0.83
CRNDE-207ENST00000559598 TRIM47Q96LD4 638 aa9.85□□□□□ -0.83
CRNDE-207ENST00000559598 COG6Q9Y2V7 657 aa9.85□□□□□ -0.83
CRNDE-207ENST00000559598 MAP4K5Q9Y4K4 846 aa9.85□□□□□ -0.83
CRNDE-207ENST00000559598 UBAP1LF5GYI3 381 aa9.84□□□□□ -0.83
CRNDE-207ENST00000559598 ADH1CP00326 375 aa9.84□□□□□ -0.83
CRNDE-207ENST00000559598 NR1H3Q13133 447 aa9.84□□□□□ -0.83
CRNDE-207ENST00000559598 AFAP1Q8N556 730 aa9.84□□□□□ -0.83
CRNDE-207ENST00000559598 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
CRNDE-207ENST00000559598 TCOF1Q13428 1488 aaKnown RBP9.84□□□□□ -0.83
CRNDE-207ENST00000559598 CEP170BQ9Y4F5 1589 aaPredicted RBP9.84□□□□□ -0.83
CRNDE-207ENST00000559598 WFS1O76024 890 aa9.83□□□□□ -0.84
CRNDE-207ENST00000559598 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
CRNDE-207ENST00000559598 GRM5P41594 1212 aa9.83□□□□□ -0.84
CRNDE-207ENST00000559598 ABL2P42684 1182 aa9.83□□□□□ -0.84
CRNDE-207ENST00000559598 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
CRNDE-207ENST00000559598 IRF5Q13568 498 aa9.83□□□□□ -0.84
CRNDE-207ENST00000559598 VASH1Q7L8A9 365 aaPredicted RBP9.83□□□□□ -0.84
CRNDE-207ENST00000559598 POLR1AO95602 1720 aaPredicted RBP9.82□□□□□ -0.84
CRNDE-207ENST00000559598 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
CRNDE-207ENST00000559598 POM121Q96HA1 1249 aa9.82□□□□□ -0.84
CRNDE-207ENST00000559598 CDV3Q9UKY7 258 aaKnown RBP9.82□□□□□ -0.84
CRNDE-207ENST00000559598 CPS1P31327 1500 aa9.82□□□□□ -0.84
CRNDE-207ENST00000559598 ZNF335Q9H4Z2 1342 aaPredicted RBP9.82□□□□□ -0.84
CRNDE-207ENST00000559598 CLTCQ00610 1675 aaKnown RBP9.81□□□□□ -0.84
CRNDE-207ENST00000559598 NR5A1Q13285 461 aa9.81□□□□□ -0.84
CRNDE-207ENST00000559598 NNTQ13423 1086 aa9.81□□□□□ -0.84
CRNDE-207ENST00000559598 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
CRNDE-207ENST00000559598 CDC42BPAQ5VT25 1732 aa9.81□□□□□ -0.84
CRNDE-207ENST00000559598 LRRIQ1Q96JM4 1722 aa9.81□□□□□ -0.84
CRNDE-207ENST00000559598 RAD21O60216 631 aa9.8□□□□□ -0.84
CRNDE-207ENST00000559598 ZNF330Q9Y3S2 320 aaPredicted RBP9.8□□□□□ -0.84
CRNDE-207ENST00000559598 PLXNC1O60486 1568 aa9.8□□□□□ -0.84
CRNDE-207ENST00000559598 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
CRNDE-207ENST00000559598 CCDC18Q5T9S5 1454 aa9.79□□□□□ -0.84
CRNDE-207ENST00000559598 ZMYM3Q14202 1370 aa9.79□□□□□ -0.84
CRNDE-207ENST00000559598 SNRPBP14678 240 aaKnown RBP9.79□□□□□ -0.84
CRNDE-207ENST00000559598 FSHRP23945 695 aa9.79□□□□□ -0.84
CRNDE-207ENST00000559598 KCTD15Q96SI1 283 aaPredicted RBP9.79□□□□□ -0.84
CRNDE-207ENST00000559598 PCDHB9Q9Y5E1 797 aa9.79□□□□□ -0.84
CRNDE-207ENST00000559598 CAPN5O15484 640 aaPredicted RBP9.78□□□□□ -0.84
CRNDE-207ENST00000559598 NBPF20Q3BBV1 942 aa9.78□□□□□ -0.84
CRNDE-207ENST00000559598 INO80Q9ULG1 1556 aaPredicted RBP9.77□□□□□ -0.85
CRNDE-207ENST00000559598 PTPRKQ15262 1439 aa9.77□□□□□ -0.85
CRNDE-207ENST00000559598 TOM1O60784 492 aa9.77□□□□□ -0.85
CRNDE-207ENST00000559598 NR3C2P08235 984 aa9.77□□□□□ -0.85
CRNDE-207ENST00000559598 MCCD1P59942 119 aaPredicted RBP9.77□□□□□ -0.85
CRNDE-207ENST00000559598 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.85
CRNDE-207ENST00000559598 WASHC4Q2M389 1173 aa9.77□□□□□ -0.85
CRNDE-207ENST00000559598 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
CRNDE-207ENST00000559598 ARHGAP35Q9NRY4 1499 aa9.77□□□□□ -0.85
CRNDE-207ENST00000559598 ADGBQ8N7X0 1667 aa9.77□□□□□ -0.85
CRNDE-207ENST00000559598 ATP7AQ04656 1500 aa9.77□□□□□ -0.85
CRNDE-207ENST00000559598 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
CRNDE-207ENST00000559598 VAC14Q08AM6 782 aa9.76□□□□□ -0.85
CRNDE-207ENST00000559598 ZNF592Q92610 1267 aa9.76□□□□□ -0.85
CRNDE-207ENST00000559598 A2ML1A8K2U0 1454 aa9.76□□□□□ -0.85
CRNDE-207ENST00000559598 TERTO14746 1132 aaKnown RBP9.75□□□□□ -0.85
CRNDE-207ENST00000559598 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
CRNDE-207ENST00000559598 CLUAP1Q96AJ1 413 aa9.75□□□□□ -0.85
CRNDE-207ENST00000559598 SYCP2Q9BX26 1530 aa9.75□□□□□ -0.85
CRNDE-207ENST00000559598 FAM135AQ9P2D6 1515 aa9.75□□□□□ -0.85
CRNDE-207ENST00000559598 PLEKHH2Q8IVE3 1493 aa9.74□□□□□ -0.85
CRNDE-207ENST00000559598 HSPA1LP34931 641 aa9.74□□□□□ -0.85
CRNDE-207ENST00000559598 EIF4G2P78344 907 aaKnown RBP eCLIP9.74□□□□□ -0.85
CRNDE-207ENST00000559598 INTS6LQ5JSJ4 861 aaKnown RBP9.74□□□□□ -0.85
CRNDE-207ENST00000559598 CCDC116Q8IYX3 515 aa9.74□□□□□ -0.85
CRNDE-207ENST00000559598 NEURL4Q96JN8 1562 aa9.74□□□□□ -0.85
CRNDE-207ENST00000559598 A2MP01023 1474 aa9.73□□□□□ -0.85
CRNDE-207ENST00000559598 SHANK2Q9UPX8 1470 aa9.73□□□□□ -0.85
CRNDE-207ENST00000559598 SYNMO15061 1565 aa9.73□□□□□ -0.85
CRNDE-207ENST00000559598 ESPNB1AK53 854 aa9.73□□□□□ -0.85
CRNDE-207ENST00000559598 WDR4P57081 412 aaKnown RBP9.73□□□□□ -0.85
CRNDE-207ENST00000559598 KLF16Q9BXK1 252 aaPredicted RBP9.73□□□□□ -0.85
CRNDE-207ENST00000559598 RNF17Q9BXT8 1623 aaKnown RBP9.72□□□□□ -0.85
CRNDE-207ENST00000559598 WIPF1O43516 503 aa9.72□□□□□ -0.85
CRNDE-207ENST00000559598 TIMP2P16035 220 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms