RNA–Protein interactions for RNA: ENST00000558999.5

AP3S2-208, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5

Gene AP3S2, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-208ENST00000558999 TNRC6CQ9HCJ0 1690 aaKnown RBP11.04□□□□□ -0.64
AP3S2-208ENST00000558999 A0A0G2JLW4 131 aa11.03□□□□□ -0.64
AP3S2-208ENST00000558999 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
AP3S2-208ENST00000558999 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
AP3S2-208ENST00000558999 USHBP1Q8N6Y0 703 aa11.03□□□□□ -0.64
AP3S2-208ENST00000558999 LINC00116Q8NCU8 138 aa11.03□□□□□ -0.64
AP3S2-208ENST00000558999 SBF1O95248 1867 aa11.03□□□□□ -0.64
AP3S2-208ENST00000558999 GNPATO15228 680 aa11.02□□□□□ -0.65
AP3S2-208ENST00000558999 FCHSD2O94868 740 aa11.02□□□□□ -0.65
AP3S2-208ENST00000558999 CCDC87Q9NVE4 849 aa11.02□□□□□ -0.65
AP3S2-208ENST00000558999 INSRP06213 1382 aa11.02□□□□□ -0.65
AP3S2-208ENST00000558999 DPEP1P16444 411 aa11.01□□□□□ -0.65
AP3S2-208ENST00000558999 TMF1P82094 1093 aa11.01□□□□□ -0.65
AP3S2-208ENST00000558999 RRS1Q15050 365 aaKnown RBP11.01□□□□□ -0.65
AP3S2-208ENST00000558999 TRAPPC3LQ5T215 181 aa11.01□□□□□ -0.65
AP3S2-208ENST00000558999 SMC1BQ8NDV3 1235 aa11.01□□□□□ -0.65
AP3S2-208ENST00000558999 CARD11Q9BXL7 1154 aa11.01□□□□□ -0.65
AP3S2-208ENST00000558999 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
AP3S2-208ENST00000558999 C4AP0C0L4 1744 aa11.01□□□□□ -0.65
AP3S2-208ENST00000558999 KCPQ6ZWJ8 1503 aa11□□□□□ -0.65
AP3S2-208ENST00000558999 ATP6V1AP38606 617 aa11□□□□□ -0.65
AP3S2-208ENST00000558999 ITPK1Q13572 414 aa11□□□□□ -0.65
AP3S2-208ENST00000558999 RRAGCQ9HB90 399 aa11□□□□□ -0.65
AP3S2-208ENST00000558999 ZNF831Q5JPB2 1677 aa11□□□□□ -0.65
AP3S2-208ENST00000558999 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
AP3S2-208ENST00000558999 KCNA3P22001 575 aa10.99□□□□□ -0.65
AP3S2-208ENST00000558999 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
AP3S2-208ENST00000558999 SIN3AQ96ST3 1273 aa10.99□□□□□ -0.65
AP3S2-208ENST00000558999 TMOD3Q9NYL9 352 aa10.99□□□□□ -0.65
AP3S2-208ENST00000558999 PIM2Q9P1W9 311 aa10.99□□□□□ -0.65
AP3S2-208ENST00000558999 RTCBQ9Y3I0 505 aaKnown RBP10.99□□□□□ -0.65
AP3S2-208ENST00000558999 FYB1O15117 783 aa10.98□□□□□ -0.65
AP3S2-208ENST00000558999 HSPA1AP0DMV8 641 aaKnown RBP10.98□□□□□ -0.65
AP3S2-208ENST00000558999 HSPA1BP0DMV9 641 aaKnown RBP10.98□□□□□ -0.65
AP3S2-208ENST00000558999 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
AP3S2-208ENST00000558999 DCAF5Q96JK2 942 aa10.98□□□□□ -0.65
AP3S2-208ENST00000558999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
AP3S2-208ENST00000558999 RNF181Q9P0P0 153 aa10.98□□□□□ -0.65
AP3S2-208ENST00000558999 SPG7Q9UQ90 795 aa10.98□□□□□ -0.65
AP3S2-208ENST00000558999 PARP3Q9Y6F1 533 aa10.98□□□□□ -0.65
AP3S2-208ENST00000558999 FLT4P35916 1363 aa10.98□□□□□ -0.65
AP3S2-208ENST00000558999 DALRD3Q5D0E6 543 aaKnown RBP10.97□□□□□ -0.65
AP3S2-208ENST00000558999 CNKSR2Q8WXI2 1034 aa10.97□□□□□ -0.65
AP3S2-208ENST00000558999 ASAP1Q9ULH1 1129 aa10.97□□□□□ -0.65
AP3S2-208ENST00000558999 ZC3H4Q9UPT8 1303 aaKnown RBP10.97□□□□□ -0.65
AP3S2-208ENST00000558999 NCAPD2Q15021 1401 aa10.96□□□□□ -0.65
AP3S2-208ENST00000558999 GYS1P13807 737 aa10.96□□□□□ -0.65
AP3S2-208ENST00000558999 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
AP3S2-208ENST00000558999 ATG3Q9NT62 314 aa10.96□□□□□ -0.65
AP3S2-208ENST00000558999 COL5A3P25940 1745 aaPredicted RBP10.95□□□□□ -0.66
AP3S2-208ENST00000558999 RPS6KA4O75676 772 aa10.95□□□□□ -0.66
AP3S2-208ENST00000558999 SLC34A2O95436 690 aa10.95□□□□□ -0.66
AP3S2-208ENST00000558999 RFC4P35249 363 aa10.95□□□□□ -0.66
AP3S2-208ENST00000558999 NEUROD1Q13562 356 aa10.95□□□□□ -0.66
AP3S2-208ENST00000558999 IFNL2Q8IZJ0 200 aa10.95□□□□□ -0.66
AP3S2-208ENST00000558999 GGNBP2Q9H3C7 697 aa10.95□□□□□ -0.66
AP3S2-208ENST00000558999 MYH14Q7Z406 1995 aaKnown RBP10.95□□□□□ -0.66
AP3S2-208ENST00000558999 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
AP3S2-208ENST00000558999 KIF20BQ96Q89 1820 aa10.95□□□□□ -0.66
AP3S2-208ENST00000558999 KDRP35968 1356 aa10.94□□□□□ -0.66
AP3S2-208ENST00000558999 TONSLQ96HA7 1378 aa10.94□□□□□ -0.66
AP3S2-208ENST00000558999 CNTNAP4Q9C0A0 1308 aa10.94□□□□□ -0.66
AP3S2-208ENST00000558999 VEGFAP15692 232 aaPredicted RBP10.94□□□□□ -0.66
AP3S2-208ENST00000558999 TESK2Q96S53 571 aa10.94□□□□□ -0.66
AP3S2-208ENST00000558999 GLTPD2A6NH11 291 aa10.93□□□□□ -0.66
AP3S2-208ENST00000558999 PHKG2P15735 406 aa10.93□□□□□ -0.66
AP3S2-208ENST00000558999 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
AP3S2-208ENST00000558999 SLC4A9Q96Q91 983 aa10.92□□□□□ -0.66
AP3S2-208ENST00000558999 ERVV-2B6SEH9 535 aa10.91□□□□□ -0.66
AP3S2-208ENST00000558999 NPM3O75607 178 aaKnown RBP10.91□□□□□ -0.66
AP3S2-208ENST00000558999 LMNB1P20700 586 aa10.91□□□□□ -0.66
AP3S2-208ENST00000558999 RBM42Q9BTD8 480 aaKnown RBP10.91□□□□□ -0.66
AP3S2-208ENST00000558999 ANKRD26Q9UPS8 1709 aa10.9□□□□□ -0.66
AP3S2-208ENST00000558999 ST20-MTHFSA0A0A6YYL1 179 aa10.9□□□□□ -0.66
AP3S2-208ENST00000558999 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
AP3S2-208ENST00000558999 EYA1Q99502 592 aa10.9□□□□□ -0.66
AP3S2-208ENST00000558999 PRDM10Q9NQV6 1147 aa10.9□□□□□ -0.66
AP3S2-208ENST00000558999 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
AP3S2-208ENST00000558999 CHRNA5P30532 468 aa10.89□□□□□ -0.67
AP3S2-208ENST00000558999 EMILIN1Q9Y6C2 1016 aa10.89□□□□□ -0.67
AP3S2-208ENST00000558999 DICER1Q9UPY3 1922 aaKnown RBP10.89□□□□□ -0.67
AP3S2-208ENST00000558999 TIAM2Q8IVF5 1701 aa10.89□□□□□ -0.67
AP3S2-208ENST00000558999 USP42Q9H9J4 1324 aaKnown RBP10.88□□□□□ -0.67
AP3S2-208ENST00000558999 DLEC1Q9Y238 1755 aa10.88□□□□□ -0.67
AP3S2-208ENST00000558999 HSP90AB1P08238 724 aaKnown RBP10.88□□□□□ -0.67
AP3S2-208ENST00000558999 TM4SF1P30408 202 aa10.88□□□□□ -0.67
AP3S2-208ENST00000558999 DDR1Q08345 913 aa10.88□□□□□ -0.67
AP3S2-208ENST00000558999 FKBP8Q14318 412 aa10.88□□□□□ -0.67
AP3S2-208ENST00000558999 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
AP3S2-208ENST00000558999 AFDNP55196 1824 aaKnown RBP10.88□□□□□ -0.67
AP3S2-208ENST00000558999 POTECB2RU33 542 aa10.87□□□□□ -0.67
AP3S2-208ENST00000558999 POLRMTO00411 1230 aaKnown RBP10.87□□□□□ -0.67
AP3S2-208ENST00000558999 RASSF7Q02833 373 aa10.87□□□□□ -0.67
AP3S2-208ENST00000558999 DPY19L2Q6NUT2 758 aa10.87□□□□□ -0.67
AP3S2-208ENST00000558999 PCDH10Q9P2E7 1040 aa10.87□□□□□ -0.67
AP3S2-208ENST00000558999 PPM1GO15355 546 aaPredicted RBP10.86□□□□□ -0.67
AP3S2-208ENST00000558999 CRKLP46109 303 aaKnown RBP10.86□□□□□ -0.67
AP3S2-208ENST00000558999 SRP68Q9UHB9 627 aaKnown RBP10.86□□□□□ -0.67
AP3S2-208ENST00000558999 NRXN2Q9P2S2 1712 aa10.86□□□□□ -0.67
AP3S2-208ENST00000558999 ADAMTS7Q9UKP4 1686 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms