RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 NFATC2IPQ8NCF5 419 aa32.07■■■□□ 2.72
ZEB1-214ENST00000558863 SMARCC1Q92922 1105 aaPredicted RBP32.07■■■□□ 2.72
ZEB1-214ENST00000558863 MCM10Q7L590 875 aa32.05■■■□□ 2.72
ZEB1-214ENST00000558863 RRP7AQ9Y3A4 280 aaKnown RBP32.05■■■□□ 2.72
ZEB1-214ENST00000558863 NEUROD2Q15784 382 aa32.04■■■□□ 2.72
ZEB1-214ENST00000558863 NGEFQ8N5V2 710 aa32.04■■■□□ 2.72
ZEB1-214ENST00000558863 DCTN1Q14203 1278 aa32.01■■■□□ 2.71
ZEB1-214ENST00000558863 SIPA1L3O60292 1781 aaPredicted RBP31.99■■■□□ 2.71
ZEB1-214ENST00000558863 EN1Q05925 392 aaPredicted RBP31.99■■■□□ 2.71
ZEB1-214ENST00000558863 CCDC27Q2M243 656 aa31.99■■■□□ 2.71
ZEB1-214ENST00000558863 DEFB132Q7Z7B7 95 aa31.99■■■□□ 2.71
ZEB1-214ENST00000558863 CAMKK2Q96RR4 588 aa31.99■■■□□ 2.71
ZEB1-214ENST00000558863 TRIM35Q9UPQ4 493 aa31.99■■■□□ 2.71
ZEB1-214ENST00000558863 PALLDQ8WX93 1383 aa31.99■■■□□ 2.71
ZEB1-214ENST00000558863 HMGB2P26583 209 aaKnown RBP31.98■■■□□ 2.71
ZEB1-214ENST00000558863 TAF7Q15545 349 aaPredicted RBP31.97■■■□□ 2.71
ZEB1-214ENST00000558863 ATG3Q9NT62 314 aa31.97■■■□□ 2.71
ZEB1-214ENST00000558863 ASAP1Q9ULH1 1129 aa31.97■■■□□ 2.71
ZEB1-214ENST00000558863 CALD1Q05682 793 aaKnown RBP31.96■■■□□ 2.71
ZEB1-214ENST00000558863 SLC27A3Q5K4L6 730 aa31.96■■■□□ 2.71
ZEB1-214ENST00000558863 LY75O60449 1722 aa31.95■■■□□ 2.71
ZEB1-214ENST00000558863 PAPPAQ13219 1627 aa31.94■■■□□ 2.7
ZEB1-214ENST00000558863 BTBD11A6QL63 1104 aa31.94■■■□□ 2.7
ZEB1-214ENST00000558863 EZH2Q15910 746 aaKnown RBP31.94■■■□□ 2.7
ZEB1-214ENST00000558863 TXNRD1Q16881 649 aa31.93■■■□□ 2.7
ZEB1-214ENST00000558863 TTC5Q8N0Z6 440 aa31.93■■■□□ 2.7
ZEB1-214ENST00000558863 THUMPD2Q9BTF0 503 aaKnown RBP31.93■■■□□ 2.7
ZEB1-214ENST00000558863 BABAM1Q9NWV8 329 aa31.93■■■□□ 2.7
ZEB1-214ENST00000558863 RREB1Q92766 1687 aa31.91■■■□□ 2.7
ZEB1-214ENST00000558863 ZNF790Q6PG37 636 aa31.9■■■□□ 2.7
ZEB1-214ENST00000558863 LOC102724428A0A0B4J2F2 783 aa31.88■■■□□ 2.69
ZEB1-214ENST00000558863 SIK1P57059 783 aa31.88■■■□□ 2.69
ZEB1-214ENST00000558863 WWC1Q8IX03 1113 aa31.88■■■□□ 2.69
ZEB1-214ENST00000558863 PROM2Q8N271 834 aa31.88■■■□□ 2.69
ZEB1-214ENST00000558863 CCNL1Q9UK58 526 aaPredicted RBP31.88■■■□□ 2.69
ZEB1-214ENST00000558863 ZNF831Q5JPB2 1677 aa31.88■■■□□ 2.69
ZEB1-214ENST00000558863 SLC39A6Q13433 755 aa31.87■■■□□ 2.69
ZEB1-214ENST00000558863 RBM42Q9BTD8 480 aaKnown RBP31.86■■■□□ 2.69
ZEB1-214ENST00000558863 UBR2Q8IWV8 1755 aa31.85■■■□□ 2.69
ZEB1-214ENST00000558863 PTCD1O75127 700 aaKnown RBP31.84■■■□□ 2.69
ZEB1-214ENST00000558863 VSIG10Q8N0Z9 540 aa31.83■■■□□ 2.69
ZEB1-214ENST00000558863 TSPYL4Q9UJ04 414 aa31.83■■■□□ 2.69
ZEB1-214ENST00000558863 KCPQ6ZWJ8 1503 aa31.83■■■□□ 2.69
ZEB1-214ENST00000558863 IL16Q14005 1332 aa31.83■■■□□ 2.69
ZEB1-214ENST00000558863 WDR63Q8IWG1 891 aa31.82■■■□□ 2.69
ZEB1-214ENST00000558863 CFAP44Q96MT7 982 aa31.82■■■□□ 2.69
ZEB1-214ENST00000558863 FMNL2Q96PY5 1086 aa31.82■■■□□ 2.69
ZEB1-214ENST00000558863 NUP188Q5SRE5 1749 aa31.82■■■□□ 2.68
ZEB1-214ENST00000558863 KDM3BQ7LBC6 1761 aa31.82■■■□□ 2.68
ZEB1-214ENST00000558863 ATP6V1AP38606 617 aa31.81■■■□□ 2.68
ZEB1-214ENST00000558863 GNAI1P63096 354 aa31.81■■■□□ 2.68
ZEB1-214ENST00000558863 LRRC4BQ9NT99 713 aa31.81■■■□□ 2.68
ZEB1-214ENST00000558863 IFT57Q9NWB7 429 aa31.81■■■□□ 2.68
ZEB1-214ENST00000558863 CICQ96RK0 1608 aaPredicted RBP31.81■■■□□ 2.68
ZEB1-214ENST00000558863 CHL1O00533 1208 aa31.81■■■□□ 2.68
ZEB1-214ENST00000558863 SALL2Q9Y467 1007 aaPredicted RBP31.81■■■□□ 2.68
ZEB1-214ENST00000558863 SENP3-EIF4A1A0A087X0R7 540 aa31.79■■■□□ 2.68
ZEB1-214ENST00000558863 NBPF14Q5TI25 921 aa31.79■■■□□ 2.68
ZEB1-214ENST00000558863 ZNF496Q96IT1 587 aaPredicted RBP31.79■■■□□ 2.68
ZEB1-214ENST00000558863 MIS18AQ9NYP9 233 aa31.79■■■□□ 2.68
ZEB1-214ENST00000558863 HEG1Q9ULI3 1381 aa31.78■■■□□ 2.68
ZEB1-214ENST00000558863 TEX13AQ9BXU3 409 aaPredicted RBP31.78■■■□□ 2.68
ZEB1-214ENST00000558863 LAS1LQ9Y4W2 734 aaKnown RBP31.78■■■□□ 2.68
ZEB1-214ENST00000558863 C5P01031 1676 aa31.77■■■□□ 2.68
ZEB1-214ENST00000558863 ZNF853P0CG23 659 aa31.77■■■□□ 2.68
ZEB1-214ENST00000558863 KCNQ3O43525 872 aa31.76■■■□□ 2.67
ZEB1-214ENST00000558863 SLC4A9Q96Q91 983 aa31.76■■■□□ 2.67
ZEB1-214ENST00000558863 TAF1LQ8IZX4 1826 aa31.75■■■□□ 2.67
ZEB1-214ENST00000558863 KCNQ4P56696 695 aa31.74■■■□□ 2.67
ZEB1-214ENST00000558863 ITPK1Q13572 414 aa31.74■■■□□ 2.67
ZEB1-214ENST00000558863 EIF4A1P60842 406 aaKnown RBP31.73■■■□□ 2.67
ZEB1-214ENST00000558863 ZNF521Q96K83 1311 aa31.73■■■□□ 2.67
ZEB1-214ENST00000558863 SNRPA1P09661 255 aaKnown RBP31.72■■■□□ 2.67
ZEB1-214ENST00000558863 STK32BQ9NY57 414 aa31.72■■■□□ 2.67
ZEB1-214ENST00000558863 TJP1Q07157 1748 aa31.72■■■□□ 2.67
ZEB1-214ENST00000558863 MBIPQ9NS73 344 aa31.7■■■□□ 2.67
ZEB1-214ENST00000558863 C4BP0C0L5 1744 aa31.7■■■□□ 2.66
ZEB1-214ENST00000558863 COL5A3P25940 1745 aaPredicted RBP31.7■■■□□ 2.66
ZEB1-214ENST00000558863 STARD3NLO95772 234 aa31.69■■■□□ 2.66
ZEB1-214ENST00000558863 RC3H1Q5TC82 1133 aaKnown RBP31.69■■■□□ 2.66
ZEB1-214ENST00000558863 LINC00116Q8NCU8 138 aa31.69■■■□□ 2.66
ZEB1-214ENST00000558863 CNTNAP4Q9C0A0 1308 aa31.69■■■□□ 2.66
ZEB1-214ENST00000558863 HNRNPUQ00839 825 aaKnown RBP eCLIP31.68■■■□□ 2.66
ZEB1-214ENST00000558863 DNAJC10Q8IXB1 793 aa31.68■■■□□ 2.66
ZEB1-214ENST00000558863 SLC15A2Q16348 729 aa31.68■■■□□ 2.66
ZEB1-214ENST00000558863 AKT1S1Q96B36 256 aa31.68■■■□□ 2.66
ZEB1-214ENST00000558863 MYH16Q9H6N6 1097 aa31.68■■■□□ 2.66
ZEB1-214ENST00000558863 AK7Q96M32 723 aa31.67■■■□□ 2.66
ZEB1-214ENST00000558863 GIGYF1O75420 1035 aaPredicted RBP31.66■■■□□ 2.66
ZEB1-214ENST00000558863 GOLGA2Q08379 1002 aa31.66■■■□□ 2.66
ZEB1-214ENST00000558863 ANO8Q9HCE9 1232 aaPredicted RBP31.66■■■□□ 2.66
ZEB1-214ENST00000558863 CYP19A1P11511 503 aaPredicted RBP31.65■■■□□ 2.66
ZEB1-214ENST00000558863 HOXB7P09629 217 aa31.63■■■□□ 2.65
ZEB1-214ENST00000558863 CRKLP46109 303 aaKnown RBP31.63■■■□□ 2.65
ZEB1-214ENST00000558863 E9PSI1 815 aa31.62■■■□□ 2.65
ZEB1-214ENST00000558863 ZNF827Q17R98 1081 aa31.62■■■□□ 2.65
ZEB1-214ENST00000558863 CCDC87Q9NVE4 849 aa31.62■■■□□ 2.65
ZEB1-214ENST00000558863 TFCP2L1Q9NZI6 479 aa31.62■■■□□ 2.65
ZEB1-214ENST00000558863 LAMB4A4D0S4 1761 aa31.62■■■□□ 2.65
ZEB1-214ENST00000558863 SOS1Q07889 1333 aaPredicted RBP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms