RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
CDC42BPB-202ENST00000558321 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
CDC42BPB-202ENST00000558321 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
CDC42BPB-202ENST00000558321 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
CDC42BPB-202ENST00000558321 GNPATO15228 680 aa16.65■□□□□ 0.26
CDC42BPB-202ENST00000558321 ITPK1Q13572 414 aa16.65■□□□□ 0.26
CDC42BPB-202ENST00000558321 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
CDC42BPB-202ENST00000558321 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
CDC42BPB-202ENST00000558321 PTCD1O75127 700 aaKnown RBP16.64■□□□□ 0.25
CDC42BPB-202ENST00000558321 C5P01031 1676 aa16.64■□□□□ 0.25
CDC42BPB-202ENST00000558321 QSER1Q2KHR3 1735 aa16.64■□□□□ 0.25
CDC42BPB-202ENST00000558321 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
CDC42BPB-202ENST00000558321 YY1P25490 414 aa16.63■□□□□ 0.25
CDC42BPB-202ENST00000558321 SSFA2P28290 1259 aa16.62■□□□□ 0.25
CDC42BPB-202ENST00000558321 MTHFSDQ2M296 383 aaKnown RBP16.62■□□□□ 0.25
CDC42BPB-202ENST00000558321 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
CDC42BPB-202ENST00000558321 C4BP0C0L5 1744 aa16.62■□□□□ 0.25
CDC42BPB-202ENST00000558321 TUBGCP6Q96RT7 1819 aa16.61■□□□□ 0.25
CDC42BPB-202ENST00000558321 AMIGO3Q86WK7 504 aa16.61■□□□□ 0.25
CDC42BPB-202ENST00000558321 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
CDC42BPB-202ENST00000558321 RTCBQ9Y3I0 505 aaKnown RBP16.61■□□□□ 0.25
CDC42BPB-202ENST00000558321 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-202ENST00000558321 GPR162Q16538 588 aa16.6■□□□□ 0.25
CDC42BPB-202ENST00000558321 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-202ENST00000558321 SLC4A9Q96Q91 983 aa16.6■□□□□ 0.25
CDC42BPB-202ENST00000558321 MAP3K5Q99683 1374 aa16.6■□□□□ 0.25
CDC42BPB-202ENST00000558321 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
CDC42BPB-202ENST00000558321 TRAPPC3LQ5T215 181 aa16.59■□□□□ 0.25
CDC42BPB-202ENST00000558321 RC3H1Q5TC82 1133 aaKnown RBP16.59■□□□□ 0.25
CDC42BPB-202ENST00000558321 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
CDC42BPB-202ENST00000558321 TAF1LQ8IZX4 1826 aa16.59■□□□□ 0.25
CDC42BPB-202ENST00000558321 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
CDC42BPB-202ENST00000558321 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDC42BPB-202ENST00000558321 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
CDC42BPB-202ENST00000558321 NLGN2Q8NFZ4 835 aa16.56■□□□□ 0.24
CDC42BPB-202ENST00000558321 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
CDC42BPB-202ENST00000558321 CNTNAP4Q9C0A0 1308 aa16.55■□□□□ 0.24
CDC42BPB-202ENST00000558321 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
CDC42BPB-202ENST00000558321 RPS6KA4O75676 772 aa16.55■□□□□ 0.24
CDC42BPB-202ENST00000558321 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
CDC42BPB-202ENST00000558321 RFC4P35249 363 aa16.55■□□□□ 0.24
CDC42BPB-202ENST00000558321 SLC39A6Q13433 755 aa16.55■□□□□ 0.24
CDC42BPB-202ENST00000558321 ARHGEF1Q92888 912 aaKnown RBP16.55■□□□□ 0.24
CDC42BPB-202ENST00000558321 ADRA2BP18089 450 aa16.54■□□□□ 0.24
CDC42BPB-202ENST00000558321 CRKLP46109 303 aaKnown RBP16.54■□□□□ 0.24
CDC42BPB-202ENST00000558321 TEFQ10587 303 aa16.54■□□□□ 0.24
CDC42BPB-202ENST00000558321 CD2APQ9Y5K6 639 aa16.54■□□□□ 0.24
CDC42BPB-202ENST00000558321 NLGN1Q8N2Q7 840 aa16.53■□□□□ 0.24
CDC42BPB-202ENST00000558321 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
CDC42BPB-202ENST00000558321 DNAJC10Q8IXB1 793 aa16.52■□□□□ 0.24
CDC42BPB-202ENST00000558321 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.24
CDC42BPB-202ENST00000558321 IL17REQ8NFR9 667 aa16.52■□□□□ 0.24
CDC42BPB-202ENST00000558321 PHACTR3Q96KR7 559 aa16.52■□□□□ 0.24
CDC42BPB-202ENST00000558321 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
CDC42BPB-202ENST00000558321 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.23
CDC42BPB-202ENST00000558321 FCHSD2O94868 740 aa16.51■□□□□ 0.23
CDC42BPB-202ENST00000558321 MMP10P09238 476 aa16.51■□□□□ 0.23
CDC42BPB-202ENST00000558321 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
CDC42BPB-202ENST00000558321 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
CDC42BPB-202ENST00000558321 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
CDC42BPB-202ENST00000558321 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
CDC42BPB-202ENST00000558321 NEFMP07197 916 aa16.49■□□□□ 0.23
CDC42BPB-202ENST00000558321 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
CDC42BPB-202ENST00000558321 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
CDC42BPB-202ENST00000558321 CYP19A1P11511 503 aaPredicted RBP16.48■□□□□ 0.23
CDC42BPB-202ENST00000558321 GYS1P13807 737 aa16.48■□□□□ 0.23
CDC42BPB-202ENST00000558321 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
CDC42BPB-202ENST00000558321 STARD3NLO95772 234 aa16.47■□□□□ 0.23
CDC42BPB-202ENST00000558321 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
CDC42BPB-202ENST00000558321 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
CDC42BPB-202ENST00000558321 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
CDC42BPB-202ENST00000558321 MRC1P22897 1456 aa16.47■□□□□ 0.23
CDC42BPB-202ENST00000558321 ZPR1O75312 459 aa16.46■□□□□ 0.23
CDC42BPB-202ENST00000558321 YBX3P16989 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
CDC42BPB-202ENST00000558321 ZNF790Q6PG37 636 aa16.46■□□□□ 0.23
CDC42BPB-202ENST00000558321 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
CDC42BPB-202ENST00000558321 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
CDC42BPB-202ENST00000558321 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-202ENST00000558321 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-202ENST00000558321 FKBP8Q14318 412 aa16.44■□□□□ 0.22
CDC42BPB-202ENST00000558321 MCM10Q7L590 875 aa16.44■□□□□ 0.22
CDC42BPB-202ENST00000558321 ZNF496Q96IT1 587 aaPredicted RBP16.44■□□□□ 0.22
CDC42BPB-202ENST00000558321 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
CDC42BPB-202ENST00000558321 TEX13AQ9BXU3 409 aaPredicted RBP16.44■□□□□ 0.22
CDC42BPB-202ENST00000558321 USP42Q9H9J4 1324 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-202ENST00000558321 RALBP1Q15311 655 aa16.43■□□□□ 0.22
CDC42BPB-202ENST00000558321 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
CDC42BPB-202ENST00000558321 PNNQ9H307 717 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-202ENST00000558321 ZBTB1Q9Y2K1 713 aa16.43■□□□□ 0.22
CDC42BPB-202ENST00000558321 SOS1Q07889 1333 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-202ENST00000558321 TJP1Q07157 1748 aa16.42■□□□□ 0.22
CDC42BPB-202ENST00000558321 KCPQ6ZWJ8 1503 aa16.42■□□□□ 0.22
CDC42BPB-202ENST00000558321 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-202ENST00000558321 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
CDC42BPB-202ENST00000558321 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-202ENST00000558321 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
CDC42BPB-202ENST00000558321 MYH14Q7Z406 1995 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-202ENST00000558321 CEMIPQ8WUJ3 1361 aa16.41■□□□□ 0.22
CDC42BPB-202ENST00000558321 TGFB2P61812 414 aa16.41■□□□□ 0.22
CDC42BPB-202ENST00000558321 NPM2Q86SE8 214 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms