RNA–Protein interactions for RNA: ENST00000557998.5

RNF111-202, Transcript of ring finger protein 111, humanhuman

TSL 2 BASIC

Gene RNF111, Length 4,803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-202ENST00000557998 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
RNF111-202ENST00000557998 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
RNF111-202ENST00000557998 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
RNF111-202ENST00000557998 NPHP1O15259 732 aa13.2□□□□□ -0.3
RNF111-202ENST00000557998 NAP1L2Q9ULW6 460 aaPredicted RBP13.2□□□□□ -0.3
RNF111-202ENST00000557998 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
RNF111-202ENST00000557998 IL1RAPL2Q9NP60 686 aa13.19□□□□□ -0.3
RNF111-202ENST00000557998 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
RNF111-202ENST00000557998 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
RNF111-202ENST00000557998 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
RNF111-202ENST00000557998 CHRNA2Q15822 529 aa13.19□□□□□ -0.3
RNF111-202ENST00000557998 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
RNF111-202ENST00000557998 BABAM1Q9NWV8 329 aa13.19□□□□□ -0.3
RNF111-202ENST00000557998 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
RNF111-202ENST00000557998 ZNF853P0CG23 659 aa13.18□□□□□ -0.3
RNF111-202ENST00000557998 HYPKQ9NX55 129 aa13.18□□□□□ -0.3
RNF111-202ENST00000557998 PI4KAP2A4QPH2 592 aa13.18□□□□□ -0.3
RNF111-202ENST00000557998 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
RNF111-202ENST00000557998 PI4KAP1Q8N8J0 262 aa13.18□□□□□ -0.3
RNF111-202ENST00000557998 MX1P20591 662 aa13.18□□□□□ -0.3
RNF111-202ENST00000557998 RAB11FIP3O75154 756 aa13.17□□□□□ -0.3
RNF111-202ENST00000557998 HSPA2P54652 639 aa13.17□□□□□ -0.3
RNF111-202ENST00000557998 DCTPP1Q9H773 170 aa13.17□□□□□ -0.3
RNF111-202ENST00000557998 GOLGA6L3A6NEY3 463 aa13.17□□□□□ -0.3
RNF111-202ENST00000557998 KIF1BPQ96EK5 621 aa13.17□□□□□ -0.3
RNF111-202ENST00000557998 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
RNF111-202ENST00000557998 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
RNF111-202ENST00000557998 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
RNF111-202ENST00000557998 CHPF2Q9P2E5 772 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 NPHP4O75161 1426 aaPredicted RBP13.16□□□□□ -0.3
RNF111-202ENST00000557998 IGSF1Q8N6C5 1336 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 CEP85Q6P2H3 762 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 SHPRHQ149N8 1683 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 NBPF6Q5VWK0 638 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 NBPF4Q96M43 638 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 ABCC4O15439 1325 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 ANXA1P04083 346 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 NUCB2P80303 420 aa13.16□□□□□ -0.3
RNF111-202ENST00000557998 G2E3Q7L622 706 aa13.15□□□□□ -0.3
RNF111-202ENST00000557998 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.3
RNF111-202ENST00000557998 SKOR2Q2VWA4 1001 aaPredicted RBP13.15□□□□□ -0.3
RNF111-202ENST00000557998 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.3
RNF111-202ENST00000557998 NEK4P51957 841 aa13.15□□□□□ -0.3
RNF111-202ENST00000557998 TTC22Q5TAA0 569 aa13.15□□□□□ -0.3
RNF111-202ENST00000557998 OVOS2A0A0J9YW53 1432 aa13.15□□□□□ -0.3
RNF111-202ENST00000557998 OVOS2Q6IE36 1432 aa13.15□□□□□ -0.3
RNF111-202ENST00000557998 CABLES1Q8TDN4 633 aa13.15□□□□□ -0.3
RNF111-202ENST00000557998 KIF24Q5T7B8 1368 aa13.15□□□□□ -0.3
RNF111-202ENST00000557998 UBR1Q8IWV7 1749 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 GOLGA6L4A6NEF3 574 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 SEC24BO95487 1268 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
RNF111-202ENST00000557998 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
RNF111-202ENST00000557998 FMNL2Q96PY5 1086 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 USP31Q70CQ4 1352 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 KIF20BQ96Q89 1820 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 RNF20Q5VTR2 975 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 SIL1Q9H173 461 aa13.14□□□□□ -0.31
RNF111-202ENST00000557998 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
RNF111-202ENST00000557998 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
RNF111-202ENST00000557998 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
RNF111-202ENST00000557998 MCM2P49736 904 aa13.13□□□□□ -0.31
RNF111-202ENST00000557998 DDX49Q9Y6V7 483 aaKnown RBP13.13□□□□□ -0.31
RNF111-202ENST00000557998 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
RNF111-202ENST00000557998 NEUROD6Q96NK8 337 aa13.13□□□□□ -0.31
RNF111-202ENST00000557998 LRRFIP1Q32MZ4 808 aaKnown RBP13.13□□□□□ -0.31
RNF111-202ENST00000557998 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
RNF111-202ENST00000557998 ARHGAP23Q9P227 1491 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 SLIT1O75093 1534 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 ATP8B2P98198 1209 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 AACSQ86V21 672 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 HIP1O00291 1037 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 HOXB7P09629 217 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
RNF111-202ENST00000557998 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
RNF111-202ENST00000557998 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
RNF111-202ENST00000557998 HSP90B1P14625 803 aaKnown RBP13.11□□□□□ -0.31
RNF111-202ENST00000557998 KIF6Q6ZMV9 814 aa13.11□□□□□ -0.31
RNF111-202ENST00000557998 RTL1A6NKG5 1358 aa13.11□□□□□ -0.31
RNF111-202ENST00000557998 ADGRB2O60241 1585 aa13.11□□□□□ -0.31
RNF111-202ENST00000557998 SYAP1Q96A49 352 aaPredicted RBP13.11□□□□□ -0.31
RNF111-202ENST00000557998 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
RNF111-202ENST00000557998 MYD88Q99836 296 aa13.11□□□□□ -0.31
RNF111-202ENST00000557998 GLRX3O76003 335 aaKnown RBP13.1□□□□□ -0.31
RNF111-202ENST00000557998 SLC39A6Q13433 755 aa13.1□□□□□ -0.31
RNF111-202ENST00000557998 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
RNF111-202ENST00000557998 PHAXQ9H814 394 aaKnown RBP13.1□□□□□ -0.31
RNF111-202ENST00000557998 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
RNF111-202ENST00000557998 ITSN1Q15811 1721 aa13.1□□□□□ -0.31
RNF111-202ENST00000557998 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
RNF111-202ENST00000557998 NRXN3Q9Y4C0 1643 aa13.1□□□□□ -0.31
RNF111-202ENST00000557998 DIP2AQ14689 1571 aa13.1□□□□□ -0.31
RNF111-202ENST00000557998 KSR2Q6VAB6 950 aa13.1□□□□□ -0.31
RNF111-202ENST00000557998 SDSP20132 328 aa13.1□□□□□ -0.31
RNF111-202ENST00000557998 GTF2E1P29083 439 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms