RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 AK7Q96M32 723 aa29.36■■■□□ 2.29
CRNDE-203ENST00000557792 ZNF530Q6P9A1 599 aaPredicted RBP29.34■■■□□ 2.29
CRNDE-203ENST00000557792 TMOD3Q9NYL9 352 aa29.34■■■□□ 2.29
CRNDE-203ENST00000557792 HMOX1P09601 288 aa29.33■■■□□ 2.29
CRNDE-203ENST00000557792 LOC102724428A0A0B4J2F2 783 aa29.32■■■□□ 2.28
CRNDE-203ENST00000557792 YBX3P16989 372 aaKnown RBP eCLIP29.32■■■□□ 2.28
CRNDE-203ENST00000557792 SIK1P57059 783 aa29.32■■■□□ 2.28
CRNDE-203ENST00000557792 SMIM5Q71RC9 77 aa29.31■■■□□ 2.28
CRNDE-203ENST00000557792 ASAP1Q9ULH1 1129 aa29.31■■■□□ 2.28
CRNDE-203ENST00000557792 PHF14O94880 888 aa29.3■■■□□ 2.28
CRNDE-203ENST00000557792 LINC00116Q8NCU8 138 aa29.3■■■□□ 2.28
CRNDE-203ENST00000557792 HSP90AB1P08238 724 aaKnown RBP29.29■■■□□ 2.28
CRNDE-203ENST00000557792 PPP2R1AP30153 589 aa29.29■■■□□ 2.28
CRNDE-203ENST00000557792 DCAF5Q96JK2 942 aa29.29■■■□□ 2.28
CRNDE-203ENST00000557792 CD2APQ9Y5K6 639 aa29.29■■■□□ 2.28
CRNDE-203ENST00000557792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.28■■■□□ 2.28
CRNDE-203ENST00000557792 GRIN3BO60391 1043 aa29.27■■■□□ 2.28
CRNDE-203ENST00000557792 COL3A1P02461 1466 aaPredicted RBP29.26■■■□□ 2.27
CRNDE-203ENST00000557792 ERVV-2B6SEH9 535 aa29.26■■■□□ 2.27
CRNDE-203ENST00000557792 SSFA2P28290 1259 aa29.26■■■□□ 2.27
CRNDE-203ENST00000557792 ITPK1Q13572 414 aa29.26■■■□□ 2.27
CRNDE-203ENST00000557792 C1orf141Q5JVX7 400 aa29.26■■■□□ 2.27
CRNDE-203ENST00000557792 U2SURPO15042 1029 aaKnown RBP29.25■■■□□ 2.27
CRNDE-203ENST00000557792 ATG3Q9NT62 314 aa29.25■■■□□ 2.27
CRNDE-203ENST00000557792 ATP6V1AP38606 617 aa29.24■■■□□ 2.27
CRNDE-203ENST00000557792 CFAP53Q96M91 514 aa29.23■■■□□ 2.27
CRNDE-203ENST00000557792 C1QTNF8P60827 252 aa29.22■■■□□ 2.27
CRNDE-203ENST00000557792 KDM6AO15550 1401 aaPredicted RBP29.21■■■□□ 2.27
CRNDE-203ENST00000557792 GNPATO15228 680 aa29.21■■■□□ 2.27
CRNDE-203ENST00000557792 CABP4P57796 275 aa29.2■■■□□ 2.26
CRNDE-203ENST00000557792 DDX10Q13206 875 aaKnown RBP29.2■■■□□ 2.26
CRNDE-203ENST00000557792 MTHFSDQ2M296 383 aaKnown RBP29.2■■■□□ 2.26
CRNDE-203ENST00000557792 AKAP4Q5JQC9 854 aa29.2■■■□□ 2.26
CRNDE-203ENST00000557792 ZNF831Q5JPB2 1677 aa29.16■■■□□ 2.26
CRNDE-203ENST00000557792 NFATC2IPQ8NCF5 419 aa29.16■■■□□ 2.26
CRNDE-203ENST00000557792 SLC4A9Q96Q91 983 aa29.16■■■□□ 2.26
CRNDE-203ENST00000557792 LGR6Q9HBX8 967 aa29.16■■■□□ 2.26
CRNDE-203ENST00000557792 GIGYF1O75420 1035 aaPredicted RBP29.15■■■□□ 2.26
CRNDE-203ENST00000557792 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
CRNDE-203ENST00000557792 NUDCQ9Y266 331 aa29.15■■■□□ 2.26
CRNDE-203ENST00000557792 SENP3-EIF4A1A0A087X0R7 540 aa29.13■■■□□ 2.25
CRNDE-203ENST00000557792 RBM42Q9BTD8 480 aaKnown RBP29.13■■■□□ 2.25
CRNDE-203ENST00000557792 COL5A3P25940 1745 aaPredicted RBP29.12■■■□□ 2.25
CRNDE-203ENST00000557792 RNMTO43148 476 aaKnown RBP29.11■■■□□ 2.25
CRNDE-203ENST00000557792 RTCBQ9Y3I0 505 aaKnown RBP29.11■■■□□ 2.25
CRNDE-203ENST00000557792 U2AF1L5P0DN76 240 aaPredicted RBP29.1■■■□□ 2.25
CRNDE-203ENST00000557792 U2AF1Q01081 240 aaKnown RBP eCLIP29.1■■■□□ 2.25
CRNDE-203ENST00000557792 RSPH6AQ9H0K4 717 aa29.1■■■□□ 2.25
CRNDE-203ENST00000557792 WWC3Q9ULE0 1092 aa29.1■■■□□ 2.25
CRNDE-203ENST00000557792 MMP10P09238 476 aa29.09■■■□□ 2.25
CRNDE-203ENST00000557792 PRKAR2BP31323 418 aa29.09■■■□□ 2.25
CRNDE-203ENST00000557792 TRAPPC3LQ5T215 181 aa29.09■■■□□ 2.25
CRNDE-203ENST00000557792 PHACTR3Q96KR7 559 aa29.09■■■□□ 2.25
CRNDE-203ENST00000557792 RC3H1Q5TC82 1133 aaKnown RBP29.08■■■□□ 2.25
CRNDE-203ENST00000557792 SLC52A2Q9HAB3 445 aa29.08■■■□□ 2.25
CRNDE-203ENST00000557792 ATP10DQ9P241 1426 aa29.08■■■□□ 2.25
CRNDE-203ENST00000557792 MYH14Q7Z406 1995 aaKnown RBP29.07■■■□□ 2.24
CRNDE-203ENST00000557792 CNTNAP4Q9C0A0 1308 aa29.06■■■□□ 2.24
CRNDE-203ENST00000557792 GAS2L2Q8NHY3 880 aa29.06■■■□□ 2.24
CRNDE-203ENST00000557792 PTCD1O75127 700 aaKnown RBP29.05■■■□□ 2.24
CRNDE-203ENST00000557792 FCHSD2O94868 740 aa29.05■■■□□ 2.24
CRNDE-203ENST00000557792 ARHGEF1Q92888 912 aaKnown RBP29.05■■■□□ 2.24
CRNDE-203ENST00000557792 KIF13BQ9NQT8 1826 aa29.05■■■□□ 2.24
CRNDE-203ENST00000557792 ADRA2BP18089 450 aa29.04■■■□□ 2.24
CRNDE-203ENST00000557792 RALBP1Q15311 655 aa29.04■■■□□ 2.24
CRNDE-203ENST00000557792 SCN11AQ9UI33 1791 aa29.03■■■□□ 2.24
CRNDE-203ENST00000557792 ADCY9O60503 1353 aa29.03■■■□□ 2.24
CRNDE-203ENST00000557792 CICQ96RK0 1608 aaPredicted RBP29.03■■■□□ 2.24
CRNDE-203ENST00000557792 RPS6KA4O75676 772 aa29.03■■■□□ 2.24
CRNDE-203ENST00000557792 NLGN1Q8N2Q7 840 aa29.03■■■□□ 2.24
CRNDE-203ENST00000557792 GNAT3A8MTJ3 354 aa29.02■■■□□ 2.24
CRNDE-203ENST00000557792 IL17REQ8NFR9 667 aa29.02■■■□□ 2.24
CRNDE-203ENST00000557792 C4AP0C0L4 1744 aa29.02■■■□□ 2.24
CRNDE-203ENST00000557792 KIAA1551Q9HCM1 1747 aa29.02■■■□□ 2.24
CRNDE-203ENST00000557792 PXDNLA1KZ92 1463 aa29■■■□□ 2.23
CRNDE-203ENST00000557792 GYS1P13807 737 aa29■■■□□ 2.23
CRNDE-203ENST00000557792 RFC4P35249 363 aa29■■■□□ 2.23
CRNDE-203ENST00000557792 SLC39A6Q13433 755 aa29■■■□□ 2.23
CRNDE-203ENST00000557792 N4BP2Q86UW6 1770 aaPredicted RBP29■■■□□ 2.23
CRNDE-203ENST00000557792 TJP1Q07157 1748 aa28.98■■■□□ 2.23
CRNDE-203ENST00000557792 C10orf71Q711Q0 1435 aa28.97■■■□□ 2.23
CRNDE-203ENST00000557792 GPBP1L1Q9HC44 474 aaPredicted RBP28.97■■■□□ 2.23
CRNDE-203ENST00000557792 CRKLP46109 303 aaKnown RBP28.96■■■□□ 2.23
CRNDE-203ENST00000557792 TGFB2P61812 414 aa28.96■■■□□ 2.23
CRNDE-203ENST00000557792 MRC1P22897 1456 aa28.96■■■□□ 2.23
CRNDE-203ENST00000557792 CEP350Q5VT06 3117 aa28.95■■■□□ 2.23
CRNDE-203ENST00000557792 ZNF526Q8TF50 670 aaPredicted RBP28.95■■■□□ 2.22
CRNDE-203ENST00000557792 A0A0G2JLW4 131 aa28.94■■■□□ 2.22
CRNDE-203ENST00000557792 CCDC87Q9NVE4 849 aa28.94■■■□□ 2.22
CRNDE-203ENST00000557792 VIRMAQ69YN4 1812 aaKnown RBP28.94■■■□□ 2.22
CRNDE-203ENST00000557792 ADAMTS7Q9UKP4 1686 aa28.93■■■□□ 2.22
CRNDE-203ENST00000557792 TEFQ10587 303 aa28.93■■■□□ 2.22
CRNDE-203ENST00000557792 PARP3Q9Y6F1 533 aa28.93■■■□□ 2.22
CRNDE-203ENST00000557792 CEMIPQ8WUJ3 1361 aa28.9■■■□□ 2.22
CRNDE-203ENST00000557792 DNAJC10Q8IXB1 793 aa28.9■■■□□ 2.22
CRNDE-203ENST00000557792 PLEKHF1Q96S99 279 aa28.9■■■□□ 2.22
CRNDE-203ENST00000557792 SRP68Q9UHB9 627 aaKnown RBP28.9■■■□□ 2.22
CRNDE-203ENST00000557792 BCS1LQ9Y276 419 aa28.9■■■□□ 2.22
CRNDE-203ENST00000557792 MYBBP1AQ9BQG0 1328 aaKnown RBP28.9■■■□□ 2.22
CRNDE-203ENST00000557792 BRCA1P38398 1863 aaKnown RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms