RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 RAPGEF4Q8WZA2 1011 aa14.36□□□□□ -0.11
ABCD4-227ENST00000557554 RNF181Q9P0P0 153 aa14.36□□□□□ -0.11
ABCD4-227ENST00000557554 PCDH11XQ9BZA7 1347 aa14.36□□□□□ -0.11
ABCD4-227ENST00000557554 PCDH11YQ9BZA8 1340 aa14.36□□□□□ -0.11
ABCD4-227ENST00000557554 NKX1-1Q15270 411 aaPredicted RBP14.35□□□□□ -0.11
ABCD4-227ENST00000557554 HDGFL2Q7Z4V5 671 aaPredicted RBP14.35□□□□□ -0.11
ABCD4-227ENST00000557554 PIM2Q9P1W9 311 aa14.35□□□□□ -0.11
ABCD4-227ENST00000557554 VEGFAP15692 232 aaPredicted RBP14.34□□□□□ -0.11
ABCD4-227ENST00000557554 TATP17735 454 aaPredicted RBP14.34□□□□□ -0.11
ABCD4-227ENST00000557554 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
ABCD4-227ENST00000557554 L3MBTL2Q969R5 705 aa14.34□□□□□ -0.11
ABCD4-227ENST00000557554 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
ABCD4-227ENST00000557554 A0A1W2PP64 1363 aa14.34□□□□□ -0.11
ABCD4-227ENST00000557554 FOXN1O15353 648 aa14.33□□□□□ -0.12
ABCD4-227ENST00000557554 TRAPPC3LQ5T215 181 aa14.33□□□□□ -0.12
ABCD4-227ENST00000557554 CCDC87Q9NVE4 849 aa14.33□□□□□ -0.12
ABCD4-227ENST00000557554 ASAP1Q9ULH1 1129 aa14.33□□□□□ -0.12
ABCD4-227ENST00000557554 C4AP0C0L4 1744 aa14.32□□□□□ -0.12
ABCD4-227ENST00000557554 GLTPD2A6NH11 291 aa14.32□□□□□ -0.12
ABCD4-227ENST00000557554 POTECB2RU33 542 aa14.32□□□□□ -0.12
ABCD4-227ENST00000557554 GYS1P13807 737 aa14.32□□□□□ -0.12
ABCD4-227ENST00000557554 ATP6V1AP38606 617 aa14.32□□□□□ -0.12
ABCD4-227ENST00000557554 DALRD3Q5D0E6 543 aaKnown RBP14.32□□□□□ -0.12
ABCD4-227ENST00000557554 ARHGEF1Q92888 912 aaKnown RBP14.32□□□□□ -0.12
ABCD4-227ENST00000557554 TERF2IPQ9NYB0 399 aa14.32□□□□□ -0.12
ABCD4-227ENST00000557554 KDM6AO15550 1401 aaPredicted RBP14.32□□□□□ -0.12
ABCD4-227ENST00000557554 FAM161AQ3B820 660 aa14.3□□□□□ -0.12
ABCD4-227ENST00000557554 COG3Q96JB2 828 aa14.3□□□□□ -0.12
ABCD4-227ENST00000557554 ZC3H4Q9UPT8 1303 aaKnown RBP14.3□□□□□ -0.12
ABCD4-227ENST00000557554 RRS1Q15050 365 aaKnown RBP14.29□□□□□ -0.12
ABCD4-227ENST00000557554 PUS7Q96PZ0 661 aaKnown RBP14.29□□□□□ -0.12
ABCD4-227ENST00000557554 SLC4A9Q96Q91 983 aa14.29□□□□□ -0.12
ABCD4-227ENST00000557554 ATG3Q9NT62 314 aa14.29□□□□□ -0.12
ABCD4-227ENST00000557554 RTCBQ9Y3I0 505 aaKnown RBP14.29□□□□□ -0.12
ABCD4-227ENST00000557554 PARP3Q9Y6F1 533 aa14.29□□□□□ -0.12
ABCD4-227ENST00000557554 RTL1A6NKG5 1358 aa14.29□□□□□ -0.12
ABCD4-227ENST00000557554 ROCK2O75116 1388 aaKnown RBP14.29□□□□□ -0.12
ABCD4-227ENST00000557554 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
ABCD4-227ENST00000557554 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
ABCD4-227ENST00000557554 ADRA2BP18089 450 aa14.27□□□□□ -0.13
ABCD4-227ENST00000557554 HSP90AB2PQ58FF8 381 aa14.27□□□□□ -0.13
ABCD4-227ENST00000557554 MKRN1Q9UHC7 482 aaKnown RBP14.27□□□□□ -0.13
ABCD4-227ENST00000557554 RPS6KA4O75676 772 aa14.26□□□□□ -0.13
ABCD4-227ENST00000557554 CHRNA5P30532 468 aa14.26□□□□□ -0.13
ABCD4-227ENST00000557554 RGS19P49795 217 aa14.26□□□□□ -0.13
ABCD4-227ENST00000557554 INSRP06213 1382 aa14.25□□□□□ -0.13
ABCD4-227ENST00000557554 LMNB1P20700 586 aa14.25□□□□□ -0.13
ABCD4-227ENST00000557554 RASSF7Q02833 373 aa14.25□□□□□ -0.13
ABCD4-227ENST00000557554 ABHD8Q96I13 439 aa14.25□□□□□ -0.13
ABCD4-227ENST00000557554 TMOD3Q9NYL9 352 aa14.25□□□□□ -0.13
ABCD4-227ENST00000557554 MYH14Q7Z406 1995 aaKnown RBP14.25□□□□□ -0.13
ABCD4-227ENST00000557554 KDRP35968 1356 aa14.24□□□□□ -0.13
ABCD4-227ENST00000557554 RFC4P35249 363 aa14.24□□□□□ -0.13
ABCD4-227ENST00000557554 CTCFP49711 727 aaPredicted RBP14.24□□□□□ -0.13
ABCD4-227ENST00000557554 DDR1Q08345 913 aa14.24□□□□□ -0.13
ABCD4-227ENST00000557554 CCDC88AQ3V6T2 1871 aa14.24□□□□□ -0.13
ABCD4-227ENST00000557554 ZNF831Q5JPB2 1677 aa14.23□□□□□ -0.13
ABCD4-227ENST00000557554 FYB1O15117 783 aa14.23□□□□□ -0.13
ABCD4-227ENST00000557554 WBP1LQ9NX94 342 aa14.23□□□□□ -0.13
ABCD4-227ENST00000557554 CNTNAP1P78357 1384 aa14.22□□□□□ -0.13
ABCD4-227ENST00000557554 CNTNAP4Q9C0A0 1308 aa14.22□□□□□ -0.13
ABCD4-227ENST00000557554 TM4SF1P30408 202 aa14.22□□□□□ -0.13
ABCD4-227ENST00000557554 LBX1P52954 281 aa14.22□□□□□ -0.13
ABCD4-227ENST00000557554 FKBP8Q14318 412 aa14.22□□□□□ -0.13
ABCD4-227ENST00000557554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
ABCD4-227ENST00000557554 NCAPD2Q15021 1401 aa14.22□□□□□ -0.13
ABCD4-227ENST00000557554 SMG6Q86US8 1419 aaKnown RBP14.22□□□□□ -0.13
ABCD4-227ENST00000557554 COL5A3P25940 1745 aaPredicted RBP14.21□□□□□ -0.13
ABCD4-227ENST00000557554 MLLT1Q03111 559 aaPredicted RBP14.21□□□□□ -0.13
ABCD4-227ENST00000557554 SPG7Q9UQ90 795 aa14.21□□□□□ -0.13
ABCD4-227ENST00000557554 VEGFBP49765 207 aa14.2□□□□□ -0.14
ABCD4-227ENST00000557554 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
ABCD4-227ENST00000557554 VIRMAQ69YN4 1812 aaKnown RBP14.2□□□□□ -0.14
ABCD4-227ENST00000557554 PASKQ96RG2 1323 aa14.19□□□□□ -0.14
ABCD4-227ENST00000557554 POLRMTO00411 1230 aaKnown RBP14.19□□□□□ -0.14
ABCD4-227ENST00000557554 POTEIP0CG38 1075 aa14.19□□□□□ -0.14
ABCD4-227ENST00000557554 POTEJP0CG39 1038 aa14.19□□□□□ -0.14
ABCD4-227ENST00000557554 PHKG2P15735 406 aa14.19□□□□□ -0.14
ABCD4-227ENST00000557554 SRP68Q9UHB9 627 aaKnown RBP14.19□□□□□ -0.14
ABCD4-227ENST00000557554 KIF24Q5T7B8 1368 aa14.19□□□□□ -0.14
ABCD4-227ENST00000557554 NFKBIEO00221 500 aa14.18□□□□□ -0.14
ABCD4-227ENST00000557554 DPY19L2Q6NUT2 758 aa14.18□□□□□ -0.14
ABCD4-227ENST00000557554 GGNBP2Q9H3C7 697 aa14.18□□□□□ -0.14
ABCD4-227ENST00000557554 TONSLQ96HA7 1378 aa14.18□□□□□ -0.14
ABCD4-227ENST00000557554 USP42Q9H9J4 1324 aaKnown RBP14.17□□□□□ -0.14
ABCD4-227ENST00000557554 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
ABCD4-227ENST00000557554 AIDAQ96BJ3 306 aa14.17□□□□□ -0.14
ABCD4-227ENST00000557554 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
ABCD4-227ENST00000557554 TIAM2Q8IVF5 1701 aa14.17□□□□□ -0.14
ABCD4-227ENST00000557554 FLT4P35916 1363 aa14.17□□□□□ -0.14
ABCD4-227ENST00000557554 HSPA8P11142 646 aaKnown RBP14.16□□□□□ -0.14
ABCD4-227ENST00000557554 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
ABCD4-227ENST00000557554 ADAMTS7Q9UKP4 1686 aa14.15□□□□□ -0.14
ABCD4-227ENST00000557554 ERVV-2B6SEH9 535 aa14.15□□□□□ -0.14
ABCD4-227ENST00000557554 ITGBL1O95965 494 aaPredicted RBP14.15□□□□□ -0.14
ABCD4-227ENST00000557554 TESK2Q96S53 571 aa14.15□□□□□ -0.14
ABCD4-227ENST00000557554 DICER1Q9UPY3 1922 aaKnown RBP14.14□□□□□ -0.15
ABCD4-227ENST00000557554 CRKLP46109 303 aaKnown RBP14.14□□□□□ -0.15
ABCD4-227ENST00000557554 TTLL6Q8N841 843 aa14.14□□□□□ -0.15
ABCD4-227ENST00000557554 EYA1Q99502 592 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms