RNA–Protein interactions for RNA: ENST00000557500.2

TVP23BP1-201, Transcript of TVP23B pseudogene 1, humanhuman

BASIC

Gene TVP23BP1, Length 617 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23BP1-201ENST00000557500 AKAP4Q5JQC9 854 aa5.67□□□□□ -1.5
TVP23BP1-201ENST00000557500 GAS2L2Q8NHY3 880 aa5.67□□□□□ -1.5
TVP23BP1-201ENST00000557500 RGPD1P0DJD0 1748 aa5.67□□□□□ -1.5
TVP23BP1-201ENST00000557500 PARP4Q9UKK3 1724 aaKnown RBP5.67□□□□□ -1.5
TVP23BP1-201ENST00000557500 KAT6BQ8WYB5 2073 aa5.67□□□□□ -1.5
TVP23BP1-201ENST00000557500 PEAK1Q9H792 1746 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 SENP3-EIF4A1A0A087X0R7 540 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 GNAT3A8MTJ3 354 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 ERVV-2B6SEH9 535 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 HMGB2P26583 209 aaKnown RBP5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 SLC39A6Q13433 755 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 RALBP1Q15311 655 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 PNNQ9H307 717 aaKnown RBP5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 LGR6Q9HBX8 967 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 ATG3Q9NT62 314 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 WWC3Q9ULE0 1092 aa5.66□□□□□ -1.5
TVP23BP1-201ENST00000557500 NPHP1O15259 732 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 RNMTO43148 476 aaKnown RBP5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 ANP32CO43423 234 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 DCTN1Q14203 1278 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 NKX1-1Q15270 411 aaPredicted RBP5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 TRAPPC3LQ5T215 181 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 MCM10Q7L590 875 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 CCDC146Q8IYE0 955 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 FLAD1Q8NFF5 587 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 PHACTR3Q96KR7 559 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 MTFR1LQ9H019 292 aa5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 RTCBQ9Y3I0 505 aaKnown RBP5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 LAS1LQ9Y4W2 734 aaKnown RBP5.65□□□□□ -1.5
TVP23BP1-201ENST00000557500 USP54Q70EL1 1684 aa5.65□□□□□ -1.51
TVP23BP1-201ENST00000557500 BCL9O00512 1426 aa5.65□□□□□ -1.51
TVP23BP1-201ENST00000557500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 BTBD11A6QL63 1104 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 FCHSD2O94868 740 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 CANXP27824 592 aaKnown RBP5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 RFC4P35249 363 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 ITPK1Q13572 414 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 GPR162Q16538 588 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 COL23A1Q86Y22 540 aaPredicted RBP5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 LINC00116Q8NCU8 138 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 AKT1S1Q96B36 256 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 SLC52A2Q9HAB3 445 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 MIS18AQ9NYP9 233 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 FBXO3Q9UK99 471 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 RRP7AQ9Y3A4 280 aaKnown RBP5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 MAP3K5Q99683 1374 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 NPC1L1Q9UHC9 1359 aa5.64□□□□□ -1.51
TVP23BP1-201ENST00000557500 FAM208AQ9UK61 1670 aaKnown RBP5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 ZPR1O75312 459 aa5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 STARD3NLO95772 234 aa5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 DNAJC10Q8IXB1 793 aa5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 NGEFQ8N5V2 710 aa5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 FHDC1Q9C0D6 1143 aaPredicted RBP5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 RSPH6AQ9H0K4 717 aa5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 PNPLA7Q6ZV29 1317 aa5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 MYBBP1AQ9BQG0 1328 aaKnown RBP5.63□□□□□ -1.51
TVP23BP1-201ENST00000557500 TNS1Q9HBL0 1735 aaKnown RBP5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 CRKLP46109 303 aaKnown RBP5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 RIPK4P57078 832 aa5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 BICDL1Q6ZP65 573 aa5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 IL17REQ8NFR9 667 aa5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 SLC16A10Q8TF71 515 aa5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 FMNL2Q96PY5 1086 aa5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 THUMPD2Q9BTF0 503 aaKnown RBP5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 SALL2Q9Y467 1007 aaPredicted RBP5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 RGPD2P0DJD1 1756 aa5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 MAP2P11137 1827 aaKnown RBP5.62□□□□□ -1.51
TVP23BP1-201ENST00000557500 KDM6AO15550 1401 aaPredicted RBP5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 SSFA2P28290 1259 aa5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 KDRP35968 1356 aa5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 PIP4K2AP48426 406 aaPredicted RBP5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 NFE2L2Q16236 605 aa5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 NHSQ6T4R5 1651 aa5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 VSIG10Q8N0Z9 540 aa5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 ARHGEF1Q92888 912 aaKnown RBP5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 PRKRIP1Q9H875 184 aaPredicted RBP5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 MRS2Q9HD23 443 aa5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 CCDC87Q9NVE4 849 aa5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 SRP68Q9UHB9 627 aaKnown RBP5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 PARP3Q9Y6F1 533 aa5.61□□□□□ -1.51
TVP23BP1-201ENST00000557500 WNK3Q9BYP7 1800 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 DOT1LQ8TEK3 1739 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 FAM177BA6PVY3 158 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 KCNQ3O43525 872 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 RPS6KA4O75676 772 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 MMP10P09238 476 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 EIF2S2P20042 333 aaKnown RBP5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 PTGER2P43116 358 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 LMOD3Q0VAK6 560 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 TAF7Q15545 349 aaPredicted RBP5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 ZNF790Q6PG37 636 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 FAM9BQ8IZU0 186 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 NECTIN2Q92692 538 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 ZNF496Q96IT1 587 aaPredicted RBP5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 SLC4A9Q96Q91 983 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 SYT17Q9BSW7 474 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 TSPYL4Q9UJ04 414 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 ADAMTS8Q9UP79 889 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 BTAF1O14981 1849 aa5.6□□□□□ -1.51
TVP23BP1-201ENST00000557500 ANKRD26Q9UPS8 1709 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms