RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 LY75O60449 1722 aa27.68■■■□□ 2.02
SEC23A-213ENST00000557280 SLC52A2Q9HAB3 445 aa27.68■■■□□ 2.02
SEC23A-213ENST00000557280 ASAP1Q9ULH1 1129 aa27.68■■■□□ 2.02
SEC23A-213ENST00000557280 TMPOP42166 694 aaKnown RBP27.67■■■□□ 2.02
SEC23A-213ENST00000557280 PALLDQ8WX93 1383 aa27.67■■■□□ 2.02
SEC23A-213ENST00000557280 SIPA1L3O60292 1781 aaPredicted RBP27.66■■■□□ 2.02
SEC23A-213ENST00000557280 TXNRD1Q16881 649 aa27.65■■■□□ 2.02
SEC23A-213ENST00000557280 ATG3Q9NT62 314 aa27.65■■■□□ 2.02
SEC23A-213ENST00000557280 PAPPAQ13219 1627 aa27.65■■■□□ 2.02
SEC23A-213ENST00000557280 SENP3-EIF4A1A0A087X0R7 540 aa27.64■■■□□ 2.02
SEC23A-213ENST00000557280 CCER2I3L3R5 266 aa27.64■■■□□ 2.02
SEC23A-213ENST00000557280 KCNQ4P56696 695 aa27.64■■■□□ 2.02
SEC23A-213ENST00000557280 FAM9BQ8IZU0 186 aa27.64■■■□□ 2.02
SEC23A-213ENST00000557280 THUMPD2Q9BTF0 503 aaKnown RBP27.64■■■□□ 2.02
SEC23A-213ENST00000557280 RIPK4P57078 832 aa27.63■■■□□ 2.01
SEC23A-213ENST00000557280 RTF1Q92541 710 aaKnown RBP27.63■■■□□ 2.01
SEC23A-213ENST00000557280 APAF1O14727 1248 aa27.62■■■□□ 2.01
SEC23A-213ENST00000557280 NEUROD2Q15784 382 aa27.62■■■□□ 2.01
SEC23A-213ENST00000557280 LRRC4BQ9NT99 713 aa27.62■■■□□ 2.01
SEC23A-213ENST00000557280 HTATSF1O43719 755 aaKnown RBP27.61■■■□□ 2.01
SEC23A-213ENST00000557280 TEFQ10587 303 aa27.6■■■□□ 2.01
SEC23A-213ENST00000557280 SLC39A6Q13433 755 aa27.59■■■□□ 2.01
SEC23A-213ENST00000557280 SMARCC1Q92922 1105 aaPredicted RBP27.58■■■□□ 2.01
SEC23A-213ENST00000557280 TRIM35Q9UPQ4 493 aa27.58■■■□□ 2.01
SEC23A-213ENST00000557280 CCNL1Q9UK58 526 aaPredicted RBP27.57■■■□□ 2
SEC23A-213ENST00000557280 KCPQ6ZWJ8 1503 aa27.57■■■□□ 2
SEC23A-213ENST00000557280 SLC4A9Q96Q91 983 aa27.56■■■□□ 2
SEC23A-213ENST00000557280 ANO8Q9HCE9 1232 aaPredicted RBP27.56■■■□□ 2
SEC23A-213ENST00000557280 LOC102724428A0A0B4J2F2 783 aa27.54■■■□□ 2
SEC23A-213ENST00000557280 SIK1P57059 783 aa27.54■■■□□ 2
SEC23A-213ENST00000557280 SLC27A3Q5K4L6 730 aa27.54■■■□□ 2
SEC23A-213ENST00000557280 UBR2Q8IWV8 1755 aa27.54■■■□□ 2
SEC23A-213ENST00000557280 KCNQ3O43525 872 aa27.53■■■□□ 2
SEC23A-213ENST00000557280 PTCD1O75127 700 aaKnown RBP27.53■■■□□ 2
SEC23A-213ENST00000557280 RBM42Q9BTD8 480 aaKnown RBP27.53■■■□□ 2
SEC23A-213ENST00000557280 C5P01031 1676 aa27.52■■■□□ 2
SEC23A-213ENST00000557280 LMOD3Q0VAK6 560 aa27.52■■■□□ 2
SEC23A-213ENST00000557280 ITPK1Q13572 414 aa27.52■■■□□ 2
SEC23A-213ENST00000557280 BTBD11A6QL63 1104 aa27.51■■□□□ 1.99
SEC23A-213ENST00000557280 MIS18AQ9NYP9 233 aa27.51■■□□□ 1.99
SEC23A-213ENST00000557280 TAF1LQ8IZX4 1826 aa27.51■■□□□ 1.99
SEC23A-213ENST00000557280 TJP1Q07157 1748 aa27.5■■□□□ 1.99
SEC23A-213ENST00000557280 ZNF827Q17R98 1081 aa27.5■■□□□ 1.99
SEC23A-213ENST00000557280 ZNF790Q6PG37 636 aa27.49■■□□□ 1.99
SEC23A-213ENST00000557280 ZNF831Q5JPB2 1677 aa27.49■■□□□ 1.99
SEC23A-213ENST00000557280 ATP6V1AP38606 617 aa27.48■■□□□ 1.99
SEC23A-213ENST00000557280 TAF7Q15545 349 aaPredicted RBP27.48■■□□□ 1.99
SEC23A-213ENST00000557280 LINC00116Q8NCU8 138 aa27.48■■□□□ 1.99
SEC23A-213ENST00000557280 KDM3BQ7LBC6 1761 aa27.48■■□□□ 1.99
SEC23A-213ENST00000557280 CICQ96RK0 1608 aaPredicted RBP27.47■■□□□ 1.99
SEC23A-213ENST00000557280 TTC5Q8N0Z6 440 aa27.46■■□□□ 1.99
SEC23A-213ENST00000557280 ZNF496Q96IT1 587 aaPredicted RBP27.46■■□□□ 1.99
SEC23A-213ENST00000557280 C4BP0C0L5 1744 aa27.46■■□□□ 1.99
SEC23A-213ENST00000557280 COL5A3P25940 1745 aaPredicted RBP27.46■■□□□ 1.99
SEC23A-213ENST00000557280 PSDA5PKW4 1024 aaPredicted RBP27.45■■□□□ 1.98
SEC23A-213ENST00000557280 R3HDM1Q15032 1099 aaKnown RBP27.45■■□□□ 1.98
SEC23A-213ENST00000557280 AKT1S1Q96B36 256 aa27.45■■□□□ 1.98
SEC23A-213ENST00000557280 TUBGCP6Q96RT7 1819 aa27.44■■□□□ 1.98
SEC23A-213ENST00000557280 SALL2Q9Y467 1007 aaPredicted RBP27.44■■□□□ 1.98
SEC23A-213ENST00000557280 NBPF14Q5TI25 921 aa27.43■■□□□ 1.98
SEC23A-213ENST00000557280 STK32BQ9NY57 414 aa27.42■■□□□ 1.98
SEC23A-213ENST00000557280 HEG1Q9ULI3 1381 aa27.41■■□□□ 1.98
SEC23A-213ENST00000557280 SLC15A2Q16348 729 aa27.41■■□□□ 1.98
SEC23A-213ENST00000557280 DNAJC10Q8IXB1 793 aa27.41■■□□□ 1.98
SEC23A-213ENST00000557280 CCDC27Q2M243 656 aa27.4■■□□□ 1.98
SEC23A-213ENST00000557280 WWC1Q8IX03 1113 aa27.4■■□□□ 1.98
SEC23A-213ENST00000557280 AMIGO3Q86WK7 504 aa27.39■■□□□ 1.98
SEC23A-213ENST00000557280 TSPYL4Q9UJ04 414 aa27.39■■□□□ 1.98
SEC23A-213ENST00000557280 PRAMEF22A3QJZ6 481 aa27.38■■□□□ 1.97
SEC23A-213ENST00000557280 SMIM5Q71RC9 77 aa27.38■■□□□ 1.97
SEC23A-213ENST00000557280 FMNL2Q96PY5 1086 aa27.38■■□□□ 1.97
SEC23A-213ENST00000557280 PDGFDQ9GZP0 370 aaPredicted RBP27.38■■□□□ 1.97
SEC23A-213ENST00000557280 LAS1LQ9Y4W2 734 aaKnown RBP27.38■■□□□ 1.97
SEC23A-213ENST00000557280 CHL1O00533 1208 aa27.36■■□□□ 1.97
SEC23A-213ENST00000557280 EIF4A1P60842 406 aaKnown RBP27.36■■□□□ 1.97
SEC23A-213ENST00000557280 VSIG10Q8N0Z9 540 aa27.36■■□□□ 1.97
SEC23A-213ENST00000557280 CASZ1Q86V15 1759 aa27.35■■□□□ 1.97
SEC23A-213ENST00000557280 NCBP3Q53F19 620 aaKnown RBP27.35■■□□□ 1.97
SEC23A-213ENST00000557280 AK7Q96M32 723 aa27.35■■□□□ 1.97
SEC23A-213ENST00000557280 UBR3Q6ZT12 1888 aa27.35■■□□□ 1.97
SEC23A-213ENST00000557280 PNPLA7Q6ZV29 1317 aa27.35■■□□□ 1.97
SEC23A-213ENST00000557280 MYH14Q7Z406 1995 aaKnown RBP27.35■■□□□ 1.97
SEC23A-213ENST00000557280 QSER1Q2KHR3 1735 aa27.34■■□□□ 1.97
SEC23A-213ENST00000557280 ZNF853P0CG23 659 aa27.34■■□□□ 1.97
SEC23A-213ENST00000557280 CRKLP46109 303 aaKnown RBP27.34■■□□□ 1.97
SEC23A-213ENST00000557280 TFCP2L1Q9NZI6 479 aa27.34■■□□□ 1.97
SEC23A-213ENST00000557280 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
SEC23A-213ENST00000557280 CYP19A1P11511 503 aaPredicted RBP27.33■■□□□ 1.97
SEC23A-213ENST00000557280 CFAP44Q96MT7 982 aa27.33■■□□□ 1.97
SEC23A-213ENST00000557280 MBIPQ9NS73 344 aa27.33■■□□□ 1.97
SEC23A-213ENST00000557280 BABAM1Q9NWV8 329 aa27.33■■□□□ 1.97
SEC23A-213ENST00000557280 GNPATO15228 680 aa27.32■■□□□ 1.96
SEC23A-213ENST00000557280 IFT57Q9NWB7 429 aa27.32■■□□□ 1.96
SEC23A-213ENST00000557280 KRT24Q2M2I5 525 aa27.31■■□□□ 1.96
SEC23A-213ENST00000557280 INTS5Q6P9B9 1019 aaKnown RBP27.31■■□□□ 1.96
SEC23A-213ENST00000557280 LAMB4A4D0S4 1761 aa27.3■■□□□ 1.96
SEC23A-213ENST00000557280 CALD1Q05682 793 aaKnown RBP27.3■■□□□ 1.96
SEC23A-213ENST00000557280 USP16Q9Y5T5 823 aa27.3■■□□□ 1.96
SEC23A-213ENST00000557280 ZNF521Q96K83 1311 aa27.3■■□□□ 1.96
SEC23A-213ENST00000557280 PHF14O94880 888 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms