RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 UBR3Q6ZT12 1888 aa30.57■■■□□ 2.48
PABPN1-207ENST00000556821 C4BP0C0L5 1744 aa30.57■■■□□ 2.48
PABPN1-207ENST00000556821 HMOX1P09601 288 aa30.57■■■□□ 2.48
PABPN1-207ENST00000556821 ZNF530Q6P9A1 599 aaPredicted RBP30.57■■■□□ 2.48
PABPN1-207ENST00000556821 ZNF831Q5JPB2 1677 aa30.57■■■□□ 2.48
PABPN1-207ENST00000556821 PPP2R1AP30153 589 aa30.55■■■□□ 2.48
PABPN1-207ENST00000556821 CCNL1Q9UK58 526 aaPredicted RBP30.55■■■□□ 2.48
PABPN1-207ENST00000556821 GOLGB1Q14789 3259 aaKnown RBP30.54■■■□□ 2.48
PABPN1-207ENST00000556821 COL5A3P25940 1745 aaPredicted RBP30.53■■■□□ 2.48
PABPN1-207ENST00000556821 TFCP2L1Q9NZI6 479 aa30.53■■■□□ 2.48
PABPN1-207ENST00000556821 DCAF5Q96JK2 942 aa30.52■■■□□ 2.48
PABPN1-207ENST00000556821 TMOD3Q9NYL9 352 aa30.52■■■□□ 2.48
PABPN1-207ENST00000556821 ATP10DQ9P241 1426 aa30.52■■■□□ 2.48
PABPN1-207ENST00000556821 HSPA6P17066 643 aa30.51■■■□□ 2.47
PABPN1-207ENST00000556821 HSP90AB1P08238 724 aaKnown RBP30.5■■■□□ 2.47
PABPN1-207ENST00000556821 SIPA1L3O60292 1781 aaPredicted RBP30.49■■■□□ 2.47
PABPN1-207ENST00000556821 SMARCC1Q92922 1105 aaPredicted RBP30.49■■■□□ 2.47
PABPN1-207ENST00000556821 ERVV-2B6SEH9 535 aa30.48■■■□□ 2.47
PABPN1-207ENST00000556821 C1orf141Q5JVX7 400 aa30.48■■■□□ 2.47
PABPN1-207ENST00000556821 MRC1P22897 1456 aa30.47■■■□□ 2.47
PABPN1-207ENST00000556821 ASAP1Q9ULH1 1129 aa30.47■■■□□ 2.47
PABPN1-207ENST00000556821 CICQ96RK0 1608 aaPredicted RBP30.47■■■□□ 2.47
PABPN1-207ENST00000556821 U2SURPO15042 1029 aaKnown RBP30.46■■■□□ 2.47
PABPN1-207ENST00000556821 CFAP53Q96M91 514 aa30.46■■■□□ 2.47
PABPN1-207ENST00000556821 ADCY9O60503 1353 aa30.45■■■□□ 2.47
PABPN1-207ENST00000556821 DLG5Q8TDM6 1919 aa30.45■■■□□ 2.46
PABPN1-207ENST00000556821 TJP1Q07157 1748 aa30.44■■■□□ 2.46
PABPN1-207ENST00000556821 COL23A1Q86Y22 540 aaPredicted RBP30.44■■■□□ 2.46
PABPN1-207ENST00000556821 GPBP1L1Q9HC44 474 aaPredicted RBP30.44■■■□□ 2.46
PABPN1-207ENST00000556821 ATG3Q9NT62 314 aa30.44■■■□□ 2.46
PABPN1-207ENST00000556821 MYH14Q7Z406 1995 aaKnown RBP30.44■■■□□ 2.46
PABPN1-207ENST00000556821 MTHFSDQ2M296 383 aaKnown RBP30.43■■■□□ 2.46
PABPN1-207ENST00000556821 UBR2Q8IWV8 1755 aa30.43■■■□□ 2.46
PABPN1-207ENST00000556821 DDX10Q13206 875 aaKnown RBP30.42■■■□□ 2.46
PABPN1-207ENST00000556821 AKAP4Q5JQC9 854 aa30.42■■■□□ 2.46
PABPN1-207ENST00000556821 LOC102724428A0A0B4J2F2 783 aa30.41■■■□□ 2.46
PABPN1-207ENST00000556821 SIK1P57059 783 aa30.41■■■□□ 2.46
PABPN1-207ENST00000556821 ZEB1P37275 1124 aaPredicted RBP30.4■■■□□ 2.46
PABPN1-207ENST00000556821 CD2APQ9Y5K6 639 aa30.4■■■□□ 2.46
PABPN1-207ENST00000556821 CABP4P57796 275 aa30.39■■■□□ 2.46
PABPN1-207ENST00000556821 RSPH6AQ9H0K4 717 aa30.37■■■□□ 2.45
PABPN1-207ENST00000556821 ITPK1Q13572 414 aa30.36■■■□□ 2.45
PABPN1-207ENST00000556821 LGR6Q9HBX8 967 aa30.36■■■□□ 2.45
PABPN1-207ENST00000556821 NFATC2IPQ8NCF5 419 aa30.35■■■□□ 2.45
PABPN1-207ENST00000556821 LINC00116Q8NCU8 138 aa30.35■■■□□ 2.45
PABPN1-207ENST00000556821 SLC4A9Q96Q91 983 aa30.35■■■□□ 2.45
PABPN1-207ENST00000556821 C4AP0C0L4 1744 aa30.34■■■□□ 2.45
PABPN1-207ENST00000556821 RNMTO43148 476 aaKnown RBP30.34■■■□□ 2.45
PABPN1-207ENST00000556821 PRKAR2BP31323 418 aa30.34■■■□□ 2.45
PABPN1-207ENST00000556821 NUDCQ9Y266 331 aa30.34■■■□□ 2.45
PABPN1-207ENST00000556821 ATP6V1AP38606 617 aa30.32■■■□□ 2.44
PABPN1-207ENST00000556821 AMIGO3Q86WK7 504 aa30.32■■■□□ 2.44
PABPN1-207ENST00000556821 PHACTR3Q96KR7 559 aa30.32■■■□□ 2.44
PABPN1-207ENST00000556821 KIF3CO14782 793 aa30.31■■■□□ 2.44
PABPN1-207ENST00000556821 U2AF1L5P0DN76 240 aaPredicted RBP30.31■■■□□ 2.44
PABPN1-207ENST00000556821 U2AF1Q01081 240 aaKnown RBP eCLIP30.31■■■□□ 2.445e-60■■■□□ 16.1
PABPN1-207ENST00000556821 MSL1Q68DK7 614 aa30.31■■■□□ 2.44
PABPN1-207ENST00000556821 SLC52A2Q9HAB3 445 aa30.31■■■□□ 2.44
PABPN1-207ENST00000556821 HMGB2P26583 209 aaKnown RBP30.3■■■□□ 2.44
PABPN1-207ENST00000556821 KCPQ6ZWJ8 1503 aa30.3■■■□□ 2.44
PABPN1-207ENST00000556821 GAS2L2Q8NHY3 880 aa30.29■■■□□ 2.44
PABPN1-207ENST00000556821 MSH5O43196 834 aa30.28■■■□□ 2.44
PABPN1-207ENST00000556821 RALBP1Q15311 655 aa30.28■■■□□ 2.44
PABPN1-207ENST00000556821 ZNF526Q8TF50 670 aaPredicted RBP30.28■■■□□ 2.44
PABPN1-207ENST00000556821 RBM42Q9BTD8 480 aaKnown RBP30.28■■■□□ 2.44
PABPN1-207ENST00000556821 DNAJC5GQ8N7S2 189 aa30.27■■■□□ 2.44
PABPN1-207ENST00000556821 AK7Q96M32 723 aa30.27■■■□□ 2.44
PABPN1-207ENST00000556821 FCHSD2O94868 740 aa30.25■■■□□ 2.43
PABPN1-207ENST00000556821 SMIM5Q71RC9 77 aa30.25■■■□□ 2.43
PABPN1-207ENST00000556821 GNAT3A8MTJ3 354 aa30.24■■■□□ 2.43
PABPN1-207ENST00000556821 PTCD1O75127 700 aaKnown RBP30.23■■■□□ 2.43
PABPN1-207ENST00000556821 IL17REQ8NFR9 667 aa30.23■■■□□ 2.43
PABPN1-207ENST00000556821 FLAD1Q8NFF5 587 aa30.22■■■□□ 2.43
PABPN1-207ENST00000556821 CEMIPQ8WUJ3 1361 aa30.22■■■□□ 2.43
PABPN1-207ENST00000556821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.21■■■□□ 2.43
PABPN1-207ENST00000556821 GNPATO15228 680 aa30.2■■■□□ 2.43
PABPN1-207ENST00000556821 PHF14O94880 888 aa30.2■■■□□ 2.43
PABPN1-207ENST00000556821 SSFA2P28290 1259 aa30.2■■■□□ 2.43
PABPN1-207ENST00000556821 SLC39A6Q13433 755 aa30.2■■■□□ 2.43
PABPN1-207ENST00000556821 MYBBP1AQ9BQG0 1328 aaKnown RBP30.2■■■□□ 2.42
PABPN1-207ENST00000556821 CNTNAP4Q9C0A0 1308 aa30.2■■■□□ 2.42
PABPN1-207ENST00000556821 APLP1P51693 650 aa30.19■■■□□ 2.42
PABPN1-207ENST00000556821 RC3H1Q5TC82 1133 aaKnown RBP30.16■■■□□ 2.42
PABPN1-207ENST00000556821 KDM3BQ7LBC6 1761 aa30.15■■■□□ 2.42
PABPN1-207ENST00000556821 PLEKHF1Q96S99 279 aa30.14■■■□□ 2.42
PABPN1-207ENST00000556821 TEFQ10587 303 aa30.13■■■□□ 2.41
PABPN1-207ENST00000556821 DNAJC10Q8IXB1 793 aa30.12■■■□□ 2.41
PABPN1-207ENST00000556821 PRKRIP1Q9H875 184 aaPredicted RBP30.12■■■□□ 2.41
PABPN1-207ENST00000556821 KIF13BQ9NQT8 1826 aa30.11■■■□□ 2.41
PABPN1-207ENST00000556821 CRKLP46109 303 aaKnown RBP30.11■■■□□ 2.41
PABPN1-207ENST00000556821 RTCBQ9Y3I0 505 aaKnown RBP30.11■■■□□ 2.41
PABPN1-207ENST00000556821 RPS6KA4O75676 772 aa30.1■■■□□ 2.41
PABPN1-207ENST00000556821 TOMM70O94826 608 aa30.09■■■□□ 2.41
PABPN1-207ENST00000556821 MCM10Q7L590 875 aa30.08■■■□□ 2.41
PABPN1-207ENST00000556821 LAMB4A4D0S4 1761 aa30.08■■■□□ 2.41
PABPN1-207ENST00000556821 DCTN1Q14203 1278 aa30.07■■■□□ 2.4
PABPN1-207ENST00000556821 INTS5Q6P9B9 1019 aaKnown RBP30.07■■■□□ 2.4
PABPN1-207ENST00000556821 ZNF790Q6PG37 636 aa30.07■■■□□ 2.4
PABPN1-207ENST00000556821 WWC3Q9ULE0 1092 aa30.07■■■□□ 2.4
PABPN1-207ENST00000556821 ADRA2BP18089 450 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms