RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 ABHD8Q96I13 439 aa14.03□□□□□ -0.16
SRSF5-216ENST00000556647 TNRC6CQ9HCJ0 1690 aaKnown RBP14.03□□□□□ -0.16
SRSF5-216ENST00000556647 PKD1L3Q7Z443 1732 aa14.03□□□□□ -0.16
SRSF5-216ENST00000556647 LTN1O94822 1766 aa14.03□□□□□ -0.16
SRSF5-216ENST00000556647 C4BP0C0L5 1744 aa14.02□□□□□ -0.16
SRSF5-216ENST00000556647 PALLDQ8WX93 1383 aa14.02□□□□□ -0.17
SRSF5-216ENST00000556647 NBPF1Q3BBV0 1214 aa14.02□□□□□ -0.17
SRSF5-216ENST00000556647 CTCFP49711 727 aaPredicted RBP14.01□□□□□ -0.17
SRSF5-216ENST00000556647 AIDAQ96BJ3 306 aa14.01□□□□□ -0.17
SRSF5-216ENST00000556647 UBR3Q6ZT12 1888 aa14.01□□□□□ -0.17
SRSF5-216ENST00000556647 KIAA1551Q9HCM1 1747 aa14.01□□□□□ -0.17
SRSF5-216ENST00000556647 TOGARAM1Q9Y4F4 1720 aa14.01□□□□□ -0.17
SRSF5-216ENST00000556647 KTN1Q86UP2 1357 aaKnown RBP14□□□□□ -0.17
SRSF5-216ENST00000556647 KIF13BQ9NQT8 1826 aa14□□□□□ -0.17
SRSF5-216ENST00000556647 SSFA2P28290 1259 aa14□□□□□ -0.17
SRSF5-216ENST00000556647 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
SRSF5-216ENST00000556647 NSD3Q9BZ95 1437 aa13.99□□□□□ -0.17
SRSF5-216ENST00000556647 CCDC85CA6NKD9 419 aa13.99□□□□□ -0.17
SRSF5-216ENST00000556647 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
SRSF5-216ENST00000556647 KIAA1210Q9ULL0 1709 aa13.98□□□□□ -0.17
SRSF5-216ENST00000556647 EVC2Q86UK5 1308 aa13.98□□□□□ -0.17
SRSF5-216ENST00000556647 LBX1P52954 281 aa13.98□□□□□ -0.17
SRSF5-216ENST00000556647 NME9Q86XW9 330 aa13.98□□□□□ -0.17
SRSF5-216ENST00000556647 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
SRSF5-216ENST00000556647 CCDC87Q9NVE4 849 aa13.97□□□□□ -0.17
SRSF5-216ENST00000556647 PIM2Q9P1W9 311 aa13.97□□□□□ -0.17
SRSF5-216ENST00000556647 GNPATO15228 680 aa13.96□□□□□ -0.17
SRSF5-216ENST00000556647 KCNA3P22001 575 aa13.96□□□□□ -0.17
SRSF5-216ENST00000556647 IP6K1Q92551 441 aa13.96□□□□□ -0.17
SRSF5-216ENST00000556647 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
SRSF5-216ENST00000556647 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
SRSF5-216ENST00000556647 ARFGEF1Q9Y6D6 1849 aa13.96□□□□□ -0.17
SRSF5-216ENST00000556647 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
SRSF5-216ENST00000556647 BRCA1P38398 1863 aaKnown RBP13.95□□□□□ -0.18
SRSF5-216ENST00000556647 DALRD3Q5D0E6 543 aaKnown RBP13.95□□□□□ -0.18
SRSF5-216ENST00000556647 LINC00116Q8NCU8 138 aa13.95□□□□□ -0.18
SRSF5-216ENST00000556647 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
SRSF5-216ENST00000556647 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
SRSF5-216ENST00000556647 SBF1O95248 1867 aa13.95□□□□□ -0.18
SRSF5-216ENST00000556647 MEGF6O75095 1541 aa13.95□□□□□ -0.18
SRSF5-216ENST00000556647 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
SRSF5-216ENST00000556647 RGS19P49795 217 aa13.94□□□□□ -0.18
SRSF5-216ENST00000556647 TMF1P82094 1093 aa13.93□□□□□ -0.18
SRSF5-216ENST00000556647 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
SRSF5-216ENST00000556647 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.93□□□□□ -0.18
SRSF5-216ENST00000556647 FAM208AQ9UK61 1670 aaKnown RBP13.93□□□□□ -0.18
SRSF5-216ENST00000556647 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
SRSF5-216ENST00000556647 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
SRSF5-216ENST00000556647 RGPD2P0DJD1 1756 aa13.91□□□□□ -0.18
SRSF5-216ENST00000556647 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
SRSF5-216ENST00000556647 SIK1P57059 783 aa13.91□□□□□ -0.18
SRSF5-216ENST00000556647 RASSF7Q02833 373 aa13.91□□□□□ -0.18
SRSF5-216ENST00000556647 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
SRSF5-216ENST00000556647 CNTNAP1P78357 1384 aa13.91□□□□□ -0.18
SRSF5-216ENST00000556647 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
SRSF5-216ENST00000556647 RAPGEF4Q8WZA2 1011 aa13.9□□□□□ -0.18
SRSF5-216ENST00000556647 WBP1LQ9NX94 342 aa13.9□□□□□ -0.18
SRSF5-216ENST00000556647 RGL2O15211 777 aa13.89□□□□□ -0.19
SRSF5-216ENST00000556647 HSPA8P11142 646 aaKnown RBP13.89□□□□□ -0.19
SRSF5-216ENST00000556647 VEGFBP49765 207 aa13.89□□□□□ -0.19
SRSF5-216ENST00000556647 TRAPPC3LQ5T215 181 aa13.89□□□□□ -0.19
SRSF5-216ENST00000556647 PIGBQ92521 554 aa13.89□□□□□ -0.19
SRSF5-216ENST00000556647 ZC3H4Q9UPT8 1303 aaKnown RBP13.89□□□□□ -0.19
SRSF5-216ENST00000556647 MON2Q7Z3U7 1717 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 POTECB2RU33 542 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 TATP17735 454 aaPredicted RBP13.88□□□□□ -0.19
SRSF5-216ENST00000556647 CHRNA5P30532 468 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 AMPHP49418 695 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 ITPK1Q13572 414 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 CGNL1Q0VF96 1302 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 PCDH11XQ9BZA7 1347 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 PCDH11YQ9BZA8 1340 aa13.88□□□□□ -0.19
SRSF5-216ENST00000556647 ITGB4P16144 1822 aa13.87□□□□□ -0.19
SRSF5-216ENST00000556647 C4AP0C0L4 1744 aa13.87□□□□□ -0.19
SRSF5-216ENST00000556647 LMNB1P20700 586 aa13.87□□□□□ -0.19
SRSF5-216ENST00000556647 HOXC9P31274 260 aa13.87□□□□□ -0.19
SRSF5-216ENST00000556647 NBPF6Q5VWK0 638 aa13.87□□□□□ -0.19
SRSF5-216ENST00000556647 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
SRSF5-216ENST00000556647 NBPF4Q96M43 638 aa13.87□□□□□ -0.19
SRSF5-216ENST00000556647 RTCBQ9Y3I0 505 aaKnown RBP13.87□□□□□ -0.19
SRSF5-216ENST00000556647 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
SRSF5-216ENST00000556647 SBNO2Q9Y2G9 1366 aa13.85□□□□□ -0.19
SRSF5-216ENST00000556647 GYS1P13807 737 aa13.85□□□□□ -0.19
SRSF5-216ENST00000556647 FBLN1P23142 703 aa13.85□□□□□ -0.19
SRSF5-216ENST00000556647 RFC4P35249 363 aa13.85□□□□□ -0.19
SRSF5-216ENST00000556647 DPY19L2Q6NUT2 758 aa13.85□□□□□ -0.19
SRSF5-216ENST00000556647 MAP3K19Q56UN5 1328 aa13.85□□□□□ -0.19
SRSF5-216ENST00000556647 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
SRSF5-216ENST00000556647 CYP27B1O15528 508 aa13.84□□□□□ -0.19
SRSF5-216ENST00000556647 GSE1Q14687 1217 aa13.84□□□□□ -0.19
SRSF5-216ENST00000556647 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
SRSF5-216ENST00000556647 CCDC88AQ3V6T2 1871 aa13.83□□□□□ -0.2
SRSF5-216ENST00000556647 POTEIP0CG38 1075 aa13.83□□□□□ -0.2
SRSF5-216ENST00000556647 POTEJP0CG39 1038 aa13.83□□□□□ -0.2
SRSF5-216ENST00000556647 HDGFL2Q7Z4V5 671 aaPredicted RBP13.83□□□□□ -0.2
SRSF5-216ENST00000556647 ASAP1Q9ULH1 1129 aa13.83□□□□□ -0.2
SRSF5-216ENST00000556647 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
SRSF5-216ENST00000556647 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
SRSF5-216ENST00000556647 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms