RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 OSBPL3Q9H4L5 887 aa10.4□□□□□ -0.74
MARK3-210ENST00000556463 U2SURPO15042 1029 aaKnown RBP10.4□□□□□ -0.75
MARK3-210ENST00000556463 BRD1O95696 1058 aa10.4□□□□□ -0.75
MARK3-210ENST00000556463 KIAA2012Q0VF49 1180 aa10.4□□□□□ -0.75
MARK3-210ENST00000556463 NFE2L2Q16236 605 aa10.4□□□□□ -0.75
MARK3-210ENST00000556463 PDCL2Q8N4E4 241 aa10.4□□□□□ -0.75
MARK3-210ENST00000556463 GGNBP2Q9H3C7 697 aa10.4□□□□□ -0.75
MARK3-210ENST00000556463 TMEM131LA2VDJ0 1609 aa10.4□□□□□ -0.75
MARK3-210ENST00000556463 YTHDC2Q9H6S0 1430 aaKnown RBP10.39□□□□□ -0.75
MARK3-210ENST00000556463 KIF20AO95235 890 aa10.39□□□□□ -0.75
MARK3-210ENST00000556463 ANKRD44Q8N8A2 993 aa10.39□□□□□ -0.75
MARK3-210ENST00000556463 RBM27Q9P2N5 1060 aaKnown RBP10.39□□□□□ -0.75
MARK3-210ENST00000556463 MYO5BQ9ULV0 1848 aa10.39□□□□□ -0.75
MARK3-210ENST00000556463 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
MARK3-210ENST00000556463 CFAP65Q6ZU64 1925 aaKnown RBP10.39□□□□□ -0.75
MARK3-210ENST00000556463 PRPF40AO75400 957 aaKnown RBP10.39□□□□□ -0.75
MARK3-210ENST00000556463 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.75
MARK3-210ENST00000556463 CNPY4Q8N129 248 aa10.39□□□□□ -0.75
MARK3-210ENST00000556463 MYRIPQ8NFW9 859 aa10.39□□□□□ -0.75
MARK3-210ENST00000556463 GTPBP4Q9BZE4 634 aaKnown RBP10.39□□□□□ -0.75
MARK3-210ENST00000556463 CDK12Q9NYV4 1490 aaPredicted RBP10.38□□□□□ -0.75
MARK3-210ENST00000556463 NRKQ7Z2Y5 1582 aa10.38□□□□□ -0.75
MARK3-210ENST00000556463 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
MARK3-210ENST00000556463 PHACTR3Q96KR7 559 aa10.38□□□□□ -0.75
MARK3-210ENST00000556463 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
MARK3-210ENST00000556463 ATP7BP35670 1465 aa10.38□□□□□ -0.75
MARK3-210ENST00000556463 SDSP20132 328 aa10.38□□□□□ -0.75
MARK3-210ENST00000556463 CHAF1AQ13111 956 aaPredicted RBP10.38□□□□□ -0.75
MARK3-210ENST00000556463 GPATCH11Q8N954 259 aa10.38□□□□□ -0.75
MARK3-210ENST00000556463 MBD3O95983 291 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 GNAI1P63096 354 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 CADPS2Q86UW7 1296 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 API5Q9BZZ5 524 aaKnown RBP10.37□□□□□ -0.75
MARK3-210ENST00000556463 POLKQ9UBT6 870 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 SALL3Q9BXA9 1300 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 POGZQ7Z3K3 1410 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 VGFO15240 615 aaPredicted RBP10.37□□□□□ -0.75
MARK3-210ENST00000556463 KIAA0232Q92628 1395 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 SETD1AO15047 1707 aaKnown RBP10.37□□□□□ -0.75
MARK3-210ENST00000556463 ATP2B3Q16720 1220 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 DLC1Q96QB1 1528 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 TOMM22Q9NS69 142 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 SPTLC3Q9NUV7 552 aa10.37□□□□□ -0.75
MARK3-210ENST00000556463 C16orf71Q8IYS4 520 aaPredicted RBP10.36□□□□□ -0.75
MARK3-210ENST00000556463 C17orf53Q8N3J3 647 aaPredicted RBP10.36□□□□□ -0.75
MARK3-210ENST00000556463 INTS4Q96HW7 963 aaKnown RBP10.36□□□□□ -0.75
MARK3-210ENST00000556463 N4BP2Q86UW6 1770 aaPredicted RBP10.36□□□□□ -0.75
MARK3-210ENST00000556463 AATKQ6ZMQ8 1374 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 SYCE3A1L190 88 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 ST18O60284 1047 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 IL13P35225 146 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 HMGN5P82970 282 aaKnown RBP10.36□□□□□ -0.75
MARK3-210ENST00000556463 RPAP2Q8IXW5 612 aaPredicted RBP10.36□□□□□ -0.75
MARK3-210ENST00000556463 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 NPHP1O15259 732 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 UVSSAQ2YD98 709 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 CEP85Q6P2H3 762 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
MARK3-210ENST00000556463 PREX1Q8TCU6 1659 aa10.35□□□□□ -0.75
MARK3-210ENST00000556463 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
MARK3-210ENST00000556463 OTUD7AQ8TE49 926 aaPredicted RBP10.35□□□□□ -0.75
MARK3-210ENST00000556463 PRIMPOLQ96LW4 560 aa10.35□□□□□ -0.75
MARK3-210ENST00000556463 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
MARK3-210ENST00000556463 RIMS2Q9UQ26 1411 aa10.35□□□□□ -0.75
MARK3-210ENST00000556463 PIBF1Q8WXW3 757 aa10.35□□□□□ -0.75
MARK3-210ENST00000556463 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
MARK3-210ENST00000556463 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
MARK3-210ENST00000556463 MCM2P49736 904 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
MARK3-210ENST00000556463 TWISTNBQ3B726 338 aaPredicted RBP10.34□□□□□ -0.75
MARK3-210ENST00000556463 CHAMP1Q96JM3 812 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 KIF3AQ9Y496 699 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 MON2Q7Z3U7 1717 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 RIMBP3CA6NJZ7 1639 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 RIMBP3BA6NNM3 1639 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 RIMBP3Q9UFD9 1639 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 ALKQ9UM73 1620 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 RGPD1P0DJD0 1748 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 TMX3Q96JJ7 454 aa10.34□□□□□ -0.75
MARK3-210ENST00000556463 RPAP1Q9BWH6 1393 aaPredicted RBP10.33□□□□□ -0.76
MARK3-210ENST00000556463 SSH2Q76I76 1423 aa10.33□□□□□ -0.76
MARK3-210ENST00000556463 CCDC66A2RUB6 948 aa10.33□□□□□ -0.76
MARK3-210ENST00000556463 REC8O95072 547 aa10.33□□□□□ -0.76
MARK3-210ENST00000556463 ERC2O15083 957 aa10.33□□□□□ -0.76
MARK3-210ENST00000556463 EPB41L2O43491 1005 aaKnown RBP10.32□□□□□ -0.76
MARK3-210ENST00000556463 ANAPC15P60006 121 aa10.32□□□□□ -0.76
MARK3-210ENST00000556463 FKBP5Q13451 457 aaPredicted RBP10.32□□□□□ -0.76
MARK3-210ENST00000556463 TAF3Q5VWG9 929 aa10.32□□□□□ -0.76
MARK3-210ENST00000556463 FAM184AQ8NB25 1140 aa10.32□□□□□ -0.76
MARK3-210ENST00000556463 DNAJC2Q99543 621 aaKnown RBP10.32□□□□□ -0.76
MARK3-210ENST00000556463 TSPY26PQ9H489 355 aa10.32□□□□□ -0.76
MARK3-210ENST00000556463 CRYBG1Q9Y4K1 1723 aa10.32□□□□□ -0.76
MARK3-210ENST00000556463 C3P01024 1663 aa10.32□□□□□ -0.76
MARK3-210ENST00000556463 ZNF592Q92610 1267 aa10.32□□□□□ -0.76
MARK3-210ENST00000556463 SOX12O15370 315 aa10.32□□□□□ -0.76
MARK3-210ENST00000556463 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
MARK3-210ENST00000556463 TIGD1Q96MW7 591 aa10.31□□□□□ -0.76
MARK3-210ENST00000556463 FUCA2Q9BTY2 467 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms